BGIOSGA001615

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Revision as of 10:23, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA001615| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA001615, complete gene.| tag = B1111C0...")
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Gene Name

BGIOSGA001615

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA001615, complete gene.

LocusTag

B1111C09.2

Ensembl Transcript ID

BGIOSGA001615-TA

Ensembl Protein ID

BGIOSGA001615-PA

Length

3368

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:17204283..17207650

Sequence Coding Region

17207387..17207650,17206737..17206875,17206476..17206649,17206173..17206387,17205437..17205701
,17205063..17205242,17204773..17204984,17204283..17204609

Genome Context

<gbrowseImage1> name=IndicaChromosome01:17204283..17207650 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:17204283..17207650 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTGAAGAAGAGCAAGAAGAGCAAGAGCAAGCGCGTGACGCTGCGGCAGAAGCACAAGGTGCTCCGCAAGGTGAAGGAGCACCACCGCAAGAAGCGCAAGGAGGCCAAGAAGGAAGGGAAGAGCCACAGGAAGAAGGTCGAGAAGGACCCCGGGATCCCCAACGAGTGGCCCTTCAAGGAGCAGGAGCTCAAGGCCCTCGAGGCCCGCCGCGCGCAGGCGCTCCAGGAGCTCGAGCTCAAGAAGGAGGCGCGCAAGGAGAGGGCTAGGAAGAGAAAGCTTGGATTGCTTGAGGACGAGGACATTGCTAATTTGGCCTCTGCAGCTTCTGCTCAGGGCAGCGAGTTTGCAGAGAAGGATGCAGCAAAGGAGAATGCCTCTTTAGACGTGGTTAAGAGCCAAGATCATTCAGAGAGAGCCTTCTACAAGGAGCTTGTTAAAGTTATTGAAGCTTCTGATGTCATTCTTGAGGTTCTCGATGCCAGAGATCCACTGGGCACTCGCTGCATTGACATGGAAAAGATGGTCAGGAAGGCTGATCCCAGTAAACGGATTGTGCTACTTCTCAACAAGATAGATCTTGTTCCCAAGGAGTCAGTAGAGAAATGGCTTACGTACCTAAGAGAGGAAATGCCTACTGTCGCATTCAAGTGCAATACCCAAGAGCAGAGGACAAAACTGGGATGGAAATCATCAAAGATTGATAAATCAAGCAATATCCCACAAAGCAGTGATTGTCTTGGTGCTGAGAACCTGATCAAATTACTCAAGAATTATTCCAGGAGTCATGAGCTCAAACTGGCAATTACTGTGGGTATTGTTGGTCTTCCTAATGTTGGCAAGAGCAGTCTGATTAACAGTTTGAAGAGGTCCCGTGTGGTTAATGTTGGGTCCACTCCAGGAGTTACTAGATCAATGCAAGAAGTTCAGTTAGACAAGAAGGTGAAGCTGCTAGATTGTCCTGGTGTTGTGATGCTGAAATCTTCCAATAGTGGTGTATCTGTGGCCCTTCGCAACTGCAAACGAGTTGAGAAGATGGAAGATCCAATCAGTCCTGTAAAGGAAATTCTTGATCTATGCCCGCACGAGAAGCTGCTATCCCTTTACAGGGTTCCAACATTTACTTCAGTGGACGATTTCCTTCAGAAAGTGGCCACACTCCGCGGGAAATTAAAAAAAGGTGGTATAGTGGATGTTGAAGCTGCTGCAAGAATTGTACTTCATGACTGGAATGAGGGTAAAATACCCTATTTTACGGTACCACCTAAAAGGGATGCTGTAGACGACTCCGATGCAGTAATTATTTCAGAGACTGGGAAAGAATTTAACATTGATGAAATTTACAAAGCTGAGTCATCATATATTGGTGGTCTGAAATCACTGGAGGAGTTCCGTCACATCGAGATTCCATCTAATGCCCCACCGCAGATTGATGAAGAGATGCTAGAGGATGGCAAGAAGCAGAATGAACCTGCGCAGGAAAACCATGATGAGTCGATGTCCGATGCAAATGAGCGTGAAGGAGCCAAGACGGCCAGCGCGAGCACACAGAACGACAAGCTGTACACAGCAGAGGGAATACTTGATCCTCGCAAGAGAAAAGCCGAGAAGAAGAAGCGCAAGGCAAACAAGTTCAGCGTGCTGACCGACATGGATGCAGACTACGATTTCAAGGTGGATTATCAAATGAAGGATGCCCCGGCCGAAGATGGCAACGATGGTGGAGATGAGGAGCCCAAGGAAGCTGACCCTATGACTGGTGTCGATGATGCGTGA</cdnaseq>

Protein Sequence

<aaseq>MVKKSKKSKSKRVTLRQKHKVLRKVKEHHRKKRKEAKKEGKSHRKKVEKDPGIPNEWPFKEQELKALEARRAQALQELELKKEARKERARKRKLGLLEDEDIANLASAASAQGSEFAEKDAAKENASLDVVKSQDHSERAFYKELVKVIEASDVILEVLDARDPLGTRCIDMEKMVRKADPSKRIVLLLNKIDLVPKESVEKWLTYLREEMPTVAFKCNTQEQRTKLGWKSSKIDKSSNIPQSSDCLGAENLIKLLKNYSRSHELKLAITVGIVGLPNVGKSSLINSLKRSRVVNVGSTPGVTRSMQEVQLDKKVKLLDCPGVVMLKSSNSGVSVALRNCKRVEKMEDPISPVKEILDLCPHEKLLSLYRVPTFTSVDDFLQKVATLRGKLKKGGIVDVEAAARIVLHDWNEGKIPYFTVPPKRDAVDDSDAVIISETGKEFNIDEIYKAESSYIGGLKSLEEFRHIEIPSNAPPQIDEEMLEDGKKQNEPAQENHDESMSDANEREGAKTASASTQNDKLYTAEGILDPRKRKAEKKKRKANKFSVLTDMDADYDFKVDYQMKDAPAEDGNDGGDEEPKEADPMTGVDDA</aaseq>

Gene Sequence

<dnaseqindica>1..264#776..914#1002..1175#1264..1478#1950..2214#2409..2588#2667..2878#3042..3368#ATGGTGAAGAAGAGCAAGAAGAGCAAGAGCAAGCGCGTGACGCTGCGGCAGAAGCACAAGGTGCTCCGCAAGGTGAAGGAGCACCACCGCAAGAAGCGCAAGGAGGCCAAGAAGGAAGGGAAGAGCCACAGGAAGAAGGTCGAGAAGGACCCCGGGATCCCCAACGAGTGGCCCTTCAAGGAGCAGGAGCTCAAGGCCCTCGAGGCCCGCCGCGCGCAGGCGCTCCAGGAGCTCGAGCTCAAGAAGGAGGCGCGCAAGGAGAGGGTGAGCCGGGCACCGCCTTTCTCCCTCTTTGTCTTTCTTTCTATCCTTGCTGCTGCTAAAGTTGTTTTGCAAGGGTCGATTTCTCTGGTTTCCTCTCGATTGGCGATTCTAGTCGTTGAATGAAATTCTTGGATTAGATGTTTTAACTGAACGGGTAACTGTTACTGTAAGCAAAGTGTTTTTGGGGTAGATTTCATGCCATATGTCATTGTCTGGGGCGCTAATTTTTATTCCTGTAAAAAAAAAACGATGATTGTGAAATTTTGGGACATCTGTTCAGAAGTGTGTTGAATGCACATATGAATGGCACTGAACTTTATGAGATTTCATTAGAATGTTGTATGCAAACACTACACATTCAGTGCCTTAACATGGACTTGTGTGAGTAACACATACCTGCACTGGGAAGAGAGGTTTAAATATTTCTGCACCTTATTTAGTTTCATTTGTATTTTACATCTTGCTTGTACTGTTTGACCAATGGTAGAATATTGTGACCACTTCTGTTCAGGCTAGGAAGAGAAAGCTTGGATTGCTTGAGGACGAGGACATTGCTAATTTGGCCTCTGCAGCTTCTGCTCAGGGCAGCGAGTTTGCAGAGAAGGATGCAGCAAAGGAGAATGCCTCTTTAGACGTGGTTAAGAGCCAAGGTGAGGTTCAATGTTCCTACTTGTCATGCTTTGCTGCCTTACTGTTTGCCATTACATTATTCCTAAATCTGCTGATTGTATCTCCAGATCATTCAGAGAGAGCCTTCTACAAGGAGCTTGTTAAAGTTATTGAAGCTTCTGATGTCATTCTTGAGGTTCTCGATGCCAGAGATCCACTGGGCACTCGCTGCATTGACATGGAAAAGATGGTCAGGAAGGCTGATCCCAGTAAACGGATTGTGCTACTTCTCAACAAGATAGGTACAATTCAAGTTCTCTTTGAGTTTGGACTTCACTCGTGTTATGTCTACTGTCTTGCAACATCTCAATTTCAATTCATGGCATCCAGATCTTGTTCCCAAGGAGTCAGTAGAGAAATGGCTTACGTACCTAAGAGAGGAAATGCCTACTGTCGCATTCAAGTGCAATACCCAAGAGCAGAGGACAAAACTGGGATGGAAATCATCAAAGATTGATAAATCAAGCAATATCCCACAAAGCAGTGATTGTCTTGGTGCTGAGAACCTGATCAAATTACTCAAGAATTATTCCAGGAGTCATGAGGTAACCGATCAATGTTCACATGTATCGTAACTTCAGTGGGGCAGTGTAAATGGATTGTTGTTAGAGTCTGCCTGTTTAAATAATCTGTAGTAATTGTTAAAATTGGCATCTTAGCAAACAGTACCTTTGATACCTCACCTGGCATGAGAATATTGAATTTCCATTCCGTTTGTTCTGTGTACTGCTTTATGCAAACCATATTAACATTGATGGTAACATCAAGTAGTAATAATTTTCTATTCTCAAGAATGGCCTACCTTAATTTGTTATATGGGCACAGTTGAATTTGCTGTTCCAAGTAGTTTTCCTTCATTTTGTCGTGTTTGTATGGTGGTACCTTCTGTCACTAGGAAATTCATGAGCTTTTAATTCTCATTTGCACACTCTGATCTGTAGCCATGCATATGAGTTGTTTTTCTTTTCTGCTTTATGTTGCCCTTTTAGATAATTTTTATTATTTATATGTTACAGCTCAAACTGGCAATTACTGTGGGTATTGTTGGTCTTCCTAATGTTGGCAAGAGCAGTCTGATTAACAGTTTGAAGAGGTCCCGTGTGGTTAATGTTGGGTCCACTCCAGGAGTTACTAGATCAATGCAAGAAGTTCAGTTAGACAAGAAGGTGAAGCTGCTAGATTGTCCTGGTGTTGTGATGCTGAAATCTTCCAATAGTGGTGTATCTGTGGCCCTTCGCAACTGCAAACGAGTTGAGAAGATGGAAGATCCAATCAGTCCTGGTAAGTGTTGAAAAATAGCTTGCATCATTTTGGTGCTATTCAGATAGTTTTGCTGAAATCTTCATTTAATTAGCTATATATGTTTTTATTATGTGGATACTAGTACTGTCTCATTCAACAATATGCATTAAATGTTGCTGGAAGTGCACTGTATTATAACTTGTTCCATTTTTCTTCACTTTACATCCTTTCAGTAAAGGAAATTCTTGATCTATGCCCGCACGAGAAGCTGCTATCCCTTTACAGGGTTCCAACATTTACTTCAGTGGACGATTTCCTTCAGAAAGTGGCCACACTCCGCGGGAAATTAAAAAAAGGTGGTATAGTGGATGTTGAAGCTGCTGCAAGAATTGTACTTCATGACTGGAATGAGGGTACGGTCGATGACCTCCTGTACTGATTTTTCTTTACTCTTATTCCGTTCCTGAGTCATGTGACACTGTTATTTTTAGGTAAAATACCCTATTTTACGGTACCACCTAAAAGGGATGCTGTAGACGACTCCGATGCAGTAATTATTTCAGAGACTGGGAAAGAATTTAACATTGATGAAATTTACAAAGCTGAGTCATCATATATTGGTGGTCTGAAATCACTGGAGGAGTTCCGTCACATCGAGATTCCATCTAATGCCCCACCGCAGATTGATGAAGAGATGCTAGAGGTATTCTTTCTTACTATGGTTTTCGCCCCCATTGAATAATCTCTATGCTTTATGGGTGTGATTTGCATGAGATTTGTGTCAGGAATAGGATTGTCATAGTTGGCATCATCCATGAGTCATGACACTGCAATTAGATAATGTACTTGTCTTGTGCTTGATATAGGATGGCAAGAAGCAGAATGAACCTGCGCAGGAAAACCATGATGAGTCGATGTCCGATGCAAATGAGCGTGAAGGAGCCAAGACGGCCAGCGCGAGCACACAGAACGACAAGCTGTACACAGCAGAGGGAATACTTGATCCTCGCAAGAGAAAAGCCGAGAAGAAGAAGCGCAAGGCAAACAAGTTCAGCGTGCTGACCGACATGGATGCAGACTACGATTTCAAGGTGGATTATCAAATGAAGGATGCCCCGGCCGAAGATGGCAACGATGGTGGAGATGAGGAGCCCAAGGAAGCTGACCCTATGACTGGTGTCGATGATGCGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA001615

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA001615&oldid=39339"