BGIOSGA001626

From RiceWiki
Revision as of 10:23, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA001626| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA001626, complete gene.| tag = OS01G03...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA001626

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA001626, complete gene.

LocusTag

OS01G0371200

Ensembl Transcript ID

BGIOSGA001626-TA

Ensembl Protein ID

BGIOSGA001626-PA

Length

1572

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:16866679..16868250

Sequence Coding Region

16868101..16868250,16867949..16867997,16866679..16867139

Genome Context

<gbrowseImage1> name=IndicaChromosome01:16866679..16868250 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:16866679..16868250 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACGCCGGTGAAGGTGTTTGGGCCGGCGCAATCGACGAACGTGGCGAGGGTGCTGTTGTGCCTGGAGGAGGTCGGCGCCGAGTACGAGGTCGTCAACGTCGACTTCACGGTCATGGAGCACAAGAGCCCCGAACACCTCAAACGCAACCCGTTCGGGCAAATCCCAGCTTTCCAGGACGGGGATCTGTACCTCTTTGAGTCCCGCGCTATTGGAAAGTACATCCTACGCAAGTACAAGACGAGGGAAGCTGACCTACTCCGGGAAGGCAACTTGAGGGAGGCAGCCATGGTGGATGTCTGGACCGAGGTGGAGACACACCAGTACAACTCGGCGATTTCACCGATTGTGTACGAGTGCATCATCAACCCAGCCATGCGTGGGATCCCAACTAACCAAAAGGTCGTGGACGAGAGCGCGGAGAAGCTGAAGAAGGTGCTGGAGGTGTACGAGGCACGACTGTCACAGAGCACGTACCTCGCAGGTGACTTCGTCAGCTTCGCCGACCTGAACCACTTCCCCTACACCTTCTACTTCATGGGGACACCGTACGCGTCGCTGTTCGACTCGTACCCTCATGTGAAGGCATGGTGGGAGAGGCTCATGGCGAGGCCGTCCGTCAAGAAGCTCGCCGCGGTCATGGCTCCTCAGGGGGCGTAG</cdnaseq>

Protein Sequence

<aaseq>MTPVKVFGPAQSTNVARVLLCLEEVGAEYEVVNVDFTVMEHKSPEHLKRNPFGQIPAFQDGDLYLFESRAIGKYILRKYKTREADLLREGNLREAAMVDVWTEVETHQYNSAISPIVYECIINPAMRGIPTNQKVVDESAEKLKKVLEVYEARLSQSTYLAGDFVSFADLNHFPYTFYFMGTPYASLFDSYPHVKAWWERLMARPSVKKLAAVMAPQGA</aaseq>

Gene Sequence

<dnaseqindica>1..150#254..302#1112..1572#ATGACGCCGGTGAAGGTGTTTGGGCCGGCGCAATCGACGAACGTGGCGAGGGTGCTGTTGTGCCTGGAGGAGGTCGGCGCCGAGTACGAGGTCGTCAACGTCGACTTCACGGTCATGGAGCACAAGAGCCCCGAACACCTCAAACGCAACGTACGTGTACACACGTGATGCCTCTGCTCTTCTGCCCTCTACGACATGATTTTATCTGCTCCTGAATCCTGATTTGGTGGTGACGACGCCTGATTTGATGTAGCCGTTCGGGCAAATCCCAGCTTTCCAGGACGGGGATCTGTACCTCTTTGGTAAGTAAGCCTGATCTTAGCTTAGCTTCGGTTAATTCTCGCTCTCAACTCTTAAGAGCCGTACCAGGTTTTACTTGGAACAATTTTTTTTCCGGTTACATCGACGAAGCATACGACACACGTCTACAAATATGGCCCTCAGAACAGCCCTATCTTGTTCATATCATCTAAAGACATCACTCTGCATATTGCCTATGTTGAACCAATATAAATAACATTATCCTATCAAAAATTAGTAAGATTGAAAATAACTAAAAAGCGTGTTTTGTAACTCTAATAAATCTAATGAGATGGATCTGGAGTTGTCGGAGTGTCGGTGGCTACTCTTGGTCATGACTAGCTACTTCCCGCTGAAATGTTTTTGTCATCATGATGTTAACACAGAACTAACCAAACTAAACATGTTTTACTGCACAATAATACACCGTTAAGCGATACTCCGATGCTCTCTATTTGTAGTGATATACTACTGGTAGAAATAATCTGAACCGTATTAATAGTAAACTAGTAATTTACTAATAAAGTGATTAGGGTAAATTTATCATTTATGTTTTTTTCCGGCTAGATCAATATGTGGTCATCGATTACATTGGTATCGCTCATATTCATAAAAAACAAATATATATATAATTTAGACACTGCTATATCTTTTTTTTAACATAATGCCTCTTTACTTTTCTACTACCACTAACTAACAAGGTGGTATTATAAATAGATTTAAATATTTCGATCAAATCAGATCAACGATAATTATAGAGCACCGTAGTAGCGAGGGCTCAGAAATCTGACTTACGTCATATCCGTTTCAGAGTCCCGCGCTATTGGAAAGTACATCCTACGCAAGTACAAGACGAGGGAAGCTGACCTACTCCGGGAAGGCAACTTGAGGGAGGCAGCCATGGTGGATGTCTGGACCGAGGTGGAGACACACCAGTACAACTCGGCGATTTCACCGATTGTGTACGAGTGCATCATCAACCCAGCCATGCGTGGGATCCCAACTAACCAAAAGGTCGTGGACGAGAGCGCGGAGAAGCTGAAGAAGGTGCTGGAGGTGTACGAGGCACGACTGTCACAGAGCACGTACCTCGCAGGTGACTTCGTCAGCTTCGCCGACCTGAACCACTTCCCCTACACCTTCTACTTCATGGGGACACCGTACGCGTCGCTGTTCGACTCGTACCCTCATGTGAAGGCATGGTGGGAGAGGCTCATGGCGAGGCCGTCCGTCAAGAAGCTCGCCGCGGTCATGGCTCCTCAGGGGGCGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA001626