BGIOSGA001629

From RiceWiki
Revision as of 10:23, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA001629| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA001629, complete gene.| tag = OsI_019...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA001629

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA001629, complete gene.

LocusTag

OsI_01959

Ensembl Transcript ID

BGIOSGA001629-TA

Ensembl Protein ID

BGIOSGA001629-PA

Length

2221

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:16832123..16834343

Sequence Coding Region

16834282..16834343,16833895..16834171,16833640..16833688,16833062..16833235,16832123..16832748

Genome Context

<gbrowseImage1> name=IndicaChromosome01:16832123..16834343 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:16832123..16834343 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGCGTCGACCCCTCTTCTGACCCCTTACAAGATGGGCCAGTTTGATCTCGCTCACAGGGTCGTTCTTGCGCCGTTGACGCGGTGCCGGTCCTACGGGAACGTGCCGGGGCCACACAACGCCGCGTACTACGCGCAGCGGGCGGCGCGGGGCGCGCTGCTGGTGGCGGAGGCCTGCGCGGTGTCGGAGACGGCGAGAGGGTACCCCGACGTGCCCGGGATTTGGAGCGCGGAGCAGGTGGGGGCGTGGAGGCACGTCGTGGACGCCGTGCACGCCAAGGGCGCCGTCTTCTTCTGCCAGATATGGCACACGGGCCGCGTCTCCCCGACAGGCAGGAAATTTTTGCAACCCAACACTGCTGATGATTTGTCACTGATCGACGCTGAGTTCCAGCCTAATGGGCAAGCACCCATCTCAAGCACGGACAAGCAAGTGACCCCACAGGTCAGCCATGATGGCCAAGTTCTGGAATTCGCTCCTCCTCGAAGGCTGAAAACAGAGGAGATCCCAAACATCGTCGACGACTTTCGTATTGCTGCCAGAAATGCCATCGAGGCCGGATTCGACGGGGTTGAGATCCACGGCGCCAACGGTTACCTGATCGACCAGTTCATGAAGGACAGCGTCAACGACCGGAGCGACGCGTACGGCGGCAGCATAGAGAACCGGTGCCGCTTCGCCGCGGAGGTGATCACGGCGGTGGCCGGCGAGATCGGCGCGCACCGCCTGGGGGTGCGCCTCTCCCCGTTCGCCGACTACATGGACTGCCACGACTCCGACCCGGAGGCCCTCGCGCTGCGCGCGGTCGGCCTCATGAACGACCTCGGCGTCCTCTACTGCCACATGATCGAGCCGAGGATGTGCGTCGGCGCCGGCGAGGACGGCAGCAAGCCGGTGATCGCGCACGGGCGCCTGCTTCCGTTCAGGAAGGCGTTCCGGGGCACGTTCATGGTGAACGGAGGGTACGACCGGGAGGAAGGCGACAAGGCGGTCGCCGACGGCTACGCCGACCTGGTGGCGTACGGGCGGCTGTTCCTGGCCAACCCTGACCTGCCGGAGAGGTTCAGGAGGAAGGCGGGTCTGAACAAGTATGACAGGAGCACGTTCTATACCTCTGATCCTGTGGTGGGCTACACGGACTACCCGTTTCTGGATGATCAGAATTCAGAAGTAGCGACTCGTTGA</cdnaseq>

Protein Sequence

<aaseq>MEASTPLLTPYKMGQFDLAHRVVLAPLTRCRSYGNVPGPHNAAYYAQRAARGALLVAEACAVSETARGYPDVPGIWSAEQVGAWRHVVDAVHAKGAVFFCQIWHTGRVSPTGRKFLQPNTADDLSLIDAEFQPNGQAPISSTDKQVTPQVSHDGQVLEFAPPRRLKTEEIPNIVDDFRIAARNAIEAGFDGVEIHGANGYLIDQFMKDSVNDRSDAYGGSIENRCRFAAEVITAVAGEIGAHRLGVRLSPFADYMDCHDSDPEALALRAVGLMNDLGVLYCHMIEPRMCVGAGEDGSKPVIAHGRLLPFRKAFRGTFMVNGGYDREEGDKAVADGYADLVAYGRLFLANPDLPERFRRKAGLNKYDRSTFYTSDPVVGYTDYPFLDDQNSEVATR</aaseq>

Gene Sequence

<dnaseqindica>1..62#173..449#656..704#1109..1282#1596..2221#ATGGAGGCGTCGACCCCTCTTCTGACCCCTTACAAGATGGGCCAGTTTGATCTCGCTCACAGGTTCGTGTCCATGCTATTGTTCTCGTCGATCGATCGGGTTCTCCTGTGCACGCTTCCTGCAAATCCCTTCAATTTGCTTCTGCCTTGTGTGTGTGTGCGTACTGATGCAGGGTCGTTCTTGCGCCGTTGACGCGGTGCCGGTCCTACGGGAACGTGCCGGGGCCACACAACGCCGCGTACTACGCGCAGCGGGCGGCGCGGGGCGCGCTGCTGGTGGCGGAGGCCTGCGCGGTGTCGGAGACGGCGAGAGGGTACCCCGACGTGCCCGGGATTTGGAGCGCGGAGCAGGTGGGGGCGTGGAGGCACGTCGTGGACGCCGTGCACGCCAAGGGCGCCGTCTTCTTCTGCCAGATATGGCACACGGGCCGCGTCTCCCCGACAGGCAGGGTGACGCTCGCTCGCTTGATTAGTTCTTCTCCAAGTCGTCCTTTTCTGTTTTTTTTTTAAGTTTTTTGGTTTGATTCATCTTTCTGCAGTTTGCTATAGTACCATGCGCTAAAAGTTGATCTAATTATCTAAAGTATATATGTTTGCGTTTCGTAGTTCTTAGTTTATAGTTTGATCTAAGCAACACCTCGGCAGTTTCATTTCAGAAATTTTTGCAACCCAACACTGCTGATGATTTGTCACTGATCGACGCTGGTGAAACTCGTGCTTTTTTTAAGATAATGAACTGGTGCTGTGTTTATGATTTGTTGGCTGCCTTTTAATTTTTTCTCTCTCATTCATGTTTGGCTCTACTTTGTATTGTCATCCAAAACGATTTTGATTTGTTGTGATATATTTTTAATAATAATTTTAGACAGATATTTATATATCCTTATCTTCTTATGGTCCTGAAATAGACCACTAAAATGAAAGTGACAACCCCCCTCCTCCTTAAATTAGTCATGAAGTCAAGTCCAAATCAGCTGAGTATATTTTCCTATCTCCTGGGAATTTGCTCGCTCGATACTTTGTTAAGTCCAGTTGGCCGCAAGATGGATGCAATCAGTCCGCTGGGTGATTTTAAGGATGGACAATCATATATCCTCTCTTTTTTTCAGAGTTCCAGCCTAATGGGCAAGCACCCATCTCAAGCACGGACAAGCAAGTGACCCCACAGGTCAGCCATGATGGCCAAGTTCTGGAATTCGCTCCTCCTCGAAGGCTGAAAACAGAGGAGATCCCAAACATCGTCGACGACTTTCGTATTGCTGCCAGAAATGCCATCGAGGCCGGTAATAAATACAACTCGGATATATCCGCCGTAAACATGTTATGTATCGAAAATGTTGAAATTTTGTTGCAACTGCTGGTTCGGTCTGTTGCAACGATCGAGTGAAGTGTTTGGCAATGGTTTAACCGACACACACACATTTTCCTTTTGTTTGTTTTTCTCTTTTTGCCAATCATTGCAACAATATTATAATTCAATGGCTGAAACAATTTTTTTAACACTTAGTCGATATTAACCAGATATACGTCCTCAAATGTTAGAGTCTTCGGTATCAGTTGCCACCGCATAACAATTCTACTCATTTTCTACCCAAGGATTCGACGGGGTTGAGATCCACGGCGCCAACGGTTACCTGATCGACCAGTTCATGAAGGACAGCGTCAACGACCGGAGCGACGCGTACGGCGGCAGCATAGAGAACCGGTGCCGCTTCGCCGCGGAGGTGATCACGGCGGTGGCCGGCGAGATCGGCGCGCACCGCCTGGGGGTGCGCCTCTCCCCGTTCGCCGACTACATGGACTGCCACGACTCCGACCCGGAGGCCCTCGCGCTGCGCGCGGTCGGCCTCATGAACGACCTCGGCGTCCTCTACTGCCACATGATCGAGCCGAGGATGTGCGTCGGCGCCGGCGAGGACGGCAGCAAGCCGGTGATCGCGCACGGGCGCCTGCTTCCGTTCAGGAAGGCGTTCCGGGGCACGTTCATGGTGAACGGAGGGTACGACCGGGAGGAAGGCGACAAGGCGGTCGCCGACGGCTACGCCGACCTGGTGGCGTACGGGCGGCTGTTCCTGGCCAACCCTGACCTGCCGGAGAGGTTCAGGAGGAAGGCGGGTCTGAACAAGTATGACAGGAGCACGTTCTATACCTCTGATCCTGTGGTGGGCTACACGGACTACCCGTTTCTGGATGATCAGAATTCAGAAGTAGCGACTCGTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA001629