BGIOSGA001633

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Revision as of 10:24, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA001633| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA001633, complete gene.| tag = P0043B1...")
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Gene Name

BGIOSGA001633

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA001633, complete gene.

LocusTag

P0043B10.31

Ensembl Transcript ID

BGIOSGA001633-TA

Ensembl Protein ID

BGIOSGA001633-PA

Length

7760

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:16769949..16777708

Sequence Coding Region

16777668..16777708,16777353..16777452,16774397..16774582,16774237..16774284,16773959..16774162
,16773798..16773875,16773502..16773591,16773336..16773416,16773195..16773257
,16772912..16772947,16772748..16772834,16772516..16772665,16772385..16772440
,16772007..16772289,16771752..16771895,16771460..16771678,16770420..16770587
,16769949..16770050

Genome Context

<gbrowseImage1> name=IndicaChromosome01:16769949..16777708 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:16769949..16777708 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGACCCACGAGCGGAAGACGATCGATCTGGAGCAGGGGACGATTTACAACATGTGCACGCAGAAGCCGCCGCACGACTACTCGCAGCAGCTCTACGAGAAGTACCGCGAGTCCTTCGAGGAGTACATCACGTCCATGGTCTTACCTTCATTAAGAGAGAAACATGATGAGTTTATGCTGAGAGAGCTAGTAAAACGGTGGTCAAACCATAAAGTGATGGTTCGGTGGCTATCACGCTTCTTCCATTATCTTGATCGGTACTTTATTTCAAGGAGGTCCCTACCACAACTAAGTGAAGTTGGGCTTAGCTGTTTCCGGGATCTGGTATATCAAGAGATCAAAGGAAAAGTAAAAAGTGCGGTGATATCCTTGATAGATCAAGAACGTGAGGGTGAACAAATTGATAGGGCCCTGTTAAAGAATGTTCTGGATATATTTGTTGAGATTGGCTTGACTAGCATGGACTACTACGAAAATGATTTTGAAGATTTCTTGCTCAAAGATACTGCAGACTATTACTCTATAAAAGCCCAGACCTGGATTCTTGAGGACTCTTGTCCAGATTACATGTTAAAGGCAGAGGAGTGTCTGAAAAGGGAGAAAGAGCGAGTTGCTCATTATTTGCACTCCAGTAGTGAACAGAAGTTGTTGGAGAAAGTGCAACATGAGTTGCTAACTCAATACGCAAGTCAGCTCCTGGAGAAGGAGCATTCTGGATGCCATGCATTGCTTCGTGATGACAAGGTTGATGATCTCTCTAGAATGTACAGGCTCTTTTCCAGAATAACTCGTGGTTTAGAACCTGTTTCTCAAATATTTAAGCAGCATGTTACTAATGAGGGCACTGCCTTAGTGAAGCAAGCCGAAGATGCTGCTAGTAATAAGAAGCCAGAGAAGAAGGAGATAGTTGGTTTACAGGAACAGGTTTTTGTCCGGAAAATCATTGAGCTTCATGACAAGTATGTAGCTTATGTTACGGATTGTTTTCAGGGGCACACTCTCTTCCATAAGGCACTTAAGGAGGCTTTTGAAGTTTTTTGCAACAAAGGTGTTTCTGGCAGTTCAAGTGCTGAATTACTAGCTACCTTCTGTGACAATATCTTAAAGAAAGGCGGTAGTGAAAAGCTTAGTGATGAAGCAATTGAAGATACCCTTGAGAAGGTTGTAAGGTTACTTGCCTACATTAGTGACAAGGACTTGTTTGCTGAGTTCTATAGAAAGAAGCTTGCAAGGAGATTGCTTTTTGACAAGAGTGCTAATGATGAACATGAGAGAAGCATCCTTACCAAGCTAAAGCAACAATGTGGAGGGCAGTTCACTTCCAAAATGGAGGGCATGGTTACTGATCTCACTGTGGCAAGAGATCACCAGGCTAAATTTGAAGAGTTCATAAGCACACACTCAGAGTTGAATCCTGGAATAGCCTTAGCTGTTACTGTCCTCACAACAGGATTTTGGCCAAGTTACAAATCTTTTGATATAAATCTACCTGCAGAAATGGTGAAATGTGTAGAGGTTTTCAAGGAGTTTTACCAAACAAGAACAAAACACAGGAAACTTACCTGGATTTATTCACTGGGAACCTGTAATATTAATGCTAAATTTGAGGCCAAAACTATTGAGCTCATTGTTACAACTTATCAGGCTGCATTGCTGCTGCTGTTTAATGGAGTTGATAGACTCAGCTATTCTGAGATTGTGACACAGTTAAATCTCTCAGATGATGATGTTGTTCGATTGCTCCATTCTCTATCTTGTGCAAAATACAAGATTCTTAGCAAAGAACCAAATAATAGATCTATTTCACCAAATGATGTCTTCGAGTTCAACTCAAAGTTTACTGACAAGCTGCGAAGATTAAAGATACCTCTTCCTCCAGTTGATGAGAAGAAGAAAGTAGTTGAAGATGTTGATAAGGATCGCAGATACGCAATTGATGCATCAATTGTGCGTATTATGAAGAGTCGCAAAGTATTGGGTCATCAGCAACTTGTGATGGAATGTGTGGAGCAGCTTGGACGCATGTTTAAGCCTGACTTCAAGGCAATAAAGAAGCGAATTGAGGATCTTATCACAAGGGATTACTTGGAGAGGGATAAAGACAACCCAAATGTGTACAGATACTTGGCTTGA</cdnaseq>

Protein Sequence

<aaseq>MATHERKTIDLEQGTIYNMCTQKPPHDYSQQLYEKYRESFEEYITSMVLPSLREKHDEFMLRELVKRWSNHKVMVRWLSRFFHYLDRYFISRRSLPQLSEVGLSCFRDLVYQEIKGKVKSAVISLIDQEREGEQIDRALLKNVLDIFVEIGLTSMDYYENDFEDFLLKDTADYYSIKAQTWILEDSCPDYMLKAEECLKREKERVAHYLHSSSEQKLLEKVQHELLTQYASQLLEKEHSGCHALLRDDKVDDLSRMYRLFSRITRGLEPVSQIFKQHVTNEGTALVKQAEDAASNKKPEKKEIVGLQEQVFVRKIIELHDKYVAYVTDCFQGHTLFHKALKEAFEVFCNKGVSGSSSAELLATFCDNILKKGGSEKLSDEAIEDTLEKVVRLLAYISDKDLFAEFYRKKLARRLLFDKSANDEHERSILTKLKQQCGGQFTSKMEGMVTDLTVARDHQAKFEEFISTHSELNPGIALAVTVLTTGFWPSYKSFDINLPAEMVKCVEVFKEFYQTRTKHRKLTWIYSLGTCNINAKFEAKTIELIVTTYQAALLLLFNGVDRLSYSEIVTQLNLSDDDVVRLLHSLSCAKYKILSKEPNNRSISPNDVFEFNSKFTDKLRRLKIPLPPVDEKKKVVEDVDKDRRYAIDASIVRIMKSRKVLGHQQLVMECVEQLGRMFKPDFKAIKKRIEDLITRDYLERDKDNPNVYRYLA</aaseq>

Gene Sequence

<dnaseqindica>1..41#257..356#3127..3312#3425..3472#3547..3750#3834..3911#4118..4207#4293..4373#4452..4514#4762..4797#4875..4961#5044..5193#5269..5324#5420..5702#5814..5957#6031..6249#7122..7289#7659..7760#ATGGCGACCCACGAGCGGAAGACGATCGATCTGGAGCAGGGGTGGGAGTTCATGCAGAAGGGCATCACCAAGCTGAAGAACATCCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTCCCGATTTATTCGATTTTTTTCTTCCCGGCGCGCTGATCTGATTTAGGGTTCGTCTCCGTGCTCCAGGACGATTTACAACATGTGCACGCAGAAGCCGCCGCACGACTACTCGCAGCAGCTCTACGAGAAGTACCGCGAGTCCTTCGAGGAGTACATCACGTCCATGGTGAGCGGCTGTTGGGTTCCTCCCTTCATTGACTAGCTCGATTAATGCGCTCCTGTGTTGAATTTTCTAACGCAGATGGGTTAGGGATAGCGTTGAAATTATGCCAATCATGTCGTATGTACCAATGGACTAATAGCACACGCATTGAGAGTTTATAGCTGTTTACATAGAGAAGATAGATTCGATGCCGAAAGATGCTGCTCTAATTTTGATCATTGTCGATACTTTGGAGCAATCGAGATATTTTTTGTTGGCTTCTTCTGATAGGTAGATAATTGTACTTTCTTAACTAAGGAGGACCGCACTAAGTACTGCAGTATTACTTCATGTTTTTGTGAATATAGCTTACTGCGTTTTGCTTATTATTTGGTCACTGTGCTCTTAGATGCTGTCTGCTAAAAGTACTTTAGTTTGTACTGCCTGTGTCCACTATACATTTTTTTTTGATTTGCTTGGAGAGCATGAGTTGCTCAATTTAGCATGATTTTATTCAGTGCATTTGGATTTGATCTTACTGGAAGTAGGCTACTAACATCATCACTACAGAAGTACTCCAATTCACTGGCTGTGCATTTATATAAACTTCGCGATTTACTTAGAGAGCATTGATTATTCAATTTGGGATGATTTTCTTCAGCACATTTGGATTTGTTGTTACCCAGAGCAGACTAGCATCATTTTTACCGAAAAGGCTCATGCCCTGCTTTACTGAAAGCTTAAAAGGTTCAACAAAATAGCATCATATTGAGTTTTGTTTTCTGAATTGGAATCCCTTTATGTTGAAATGATTGTTCTTTCATGATTTTGTCCCTTTTCATCATGGCAGCATGTACTGTGCAACCACACTTTATTGTGTAATCACTTTCTGTTTGGGCGCCAAATCGACATGAGAAGTTTTGAGAAATACTGAATTTGCAAGGCATATGTTCCTTTCAACTATGAATTGTGATTGTAGGATCAATTGAGCAACCACTGTGGGTAGAATGCTAGATGCCTGGATGCATATTACTGTTGTTTCTTTATCCTCCCTCAGTCCCTTGTATTGACCTTTACTTCTTTCCCAATAAATTATTATCCACAAAAGGATCAATTTCTTTAGTAAATGTACCTTGCACCAGGTTGCATCATGAAATCGGAGGAAAACCTCATGAAATTTGAGTGAAGCCTTATGAAACTTGATGAATCTTGACCATGTTTGACAAAGTTTCATTTAGGGCTTATGGCATTTCTTGGGATATATATTAGTTCGATGATGTAATCTGGTGCGAAATGTGTGCCACACCTCATGCAAAGTGAAATACGGTGCTTACCGTGCTTTACTTGGTGCAAAATGCAGTTTATTCATTTTTGTTCAAAGCTAATCTTTGATTTTGTTACCTGTTGATTGCATGATGTGTCATAAACACTTCGAAGATATTGTGATTTGAACTGTTTATGGTTTAATGTCACATCTTTCATATCTGAGAGAATTTACATAATGACCATATGCATATCTATTACACTCTCCCTCACTCATTTTGCATTGGATCATTTTAATGCTGAGCAAAGTGCTCCTCAAGTCCTCATGTAATTCACCAGAAAAAATGCTTTTCAATGTTCTGAATTGTGCCGCGTCTATTGTCTAATATGTTAACTTTGTTTTTCAAGGTGTAAGTTTTTCGAGGTCATAACTTGCTTGCTAAGCATCGATTACTTGATTTAGTGATGCTGGAACAGTTGCTGCTGCTGAAATCTGTCCATACTACATCCATTCCATTTGAAATATCGGTTTCCTTTTCCCTTTGCATCAACAGGACCTTTATAGTATCATCCTGGCATATAGATATGCATATGTTTCTAGGATGTATGTGTTCATTGCTATTTAGTGTGCAGCGACTTGTATTAAATATGTAAATATGCTAATTGCTATTTGTTGTTGATAAGTTAAGTATATCTCAAATATATGGTTGATCATATAATTGATACAACATTTTCTATAACTAGATATTGCAATGCATACGATTCTATGGTCGGGACCCTGGTTCCCCGCCATATTGAGGATCTGTATATGAAGTCCTGAGCTTAGTTGCTCCCTGTCCTGTTTCCCTTCCTATNTGGAGAAAGTCTATTTCTCGTCCTCANATTTTGACTCAGTTTAGTTTTGTACCTCAATGCAAAACAGGGTTAAATATGTCCCACTCCCACAATTCTGAAAACCGGGTAAAAGTTGCCCCTCCACCATGTTTGGTGATAGTTTGGACCCAAATAGATAGTGGGGCCCATCTGTCATAGAGTGTCATGGCTGATTGTGTAAGATTCACCATTCTCCAGTCCATTTCCCAAATAGATAGTGGGGCCCCACCTGCTGAGTCAAAATCACTATAGGATAGGGCAGTGGGATAAGTTTTGTTTGGTTTTGAGAGTTGATGGGCAGCTTTTATATGGTTTTATAGTTGAGGGATGAAATTAAAACGTGTGAAGTGTTGAGAGATGAAAACAGACTTTTTCCATCCTATTATGATAGGATTGAGATCCTCTGACTTCTCTCTAACGTGGTCACTGACATGTGCGCCCTCTACTCAGCGGTCCCACTTGTCAATAACTCAAAGTTAGAGGATCCTCTTCCATTATGATATAGTTCATTAGTAGTTCTAGCTAATTATCATGCACTACAAATTCAATGAAGTTTAATTACTCTTCATCATTTGCATGTTGCCTATCTCAGATCTTCTTTTGTATTGTTCACTTCTTTTGGAAGATAAGTCCTTTATTTGGTTTCAATATTTTGTAGGTCTTACCTTCATTAAGAGAGAAACATGATGAGTTTATGCTGAGAGAGCTAGTAAAACGGTGGTCAAACCATAAAGTGATGGTTCGGTGGCTATCACGCTTCTTCCATTATCTTGATCGGTACTTTATTTCAAGGAGGTCCCTACCACAACTAAGTGAAGTTGGGCTTAGCTGTTTCCGGGATCTGGTAACACTACTTGCTTGATTACTCATGATTCTCGTTTTTTATGCAATACAACTTGCATTTCTTTGCTTGATGACTATATCTAGAATTTAATCAGTTTTATTTATTGTAACAGGTATATCAAGAGATCAAAGGAAAAGTAAAAAGTGCGGTGATATCCTTGGTGAGTCATTGTATCTTGTGATGCTATCTTTTTTTATTGTGTATGGCTGGTGATAGACATACTTTCTCGAACAGATAGATCAAGAACGTGAGGGTGAACAAATTGATAGGGCCCTGTTAAAGAATGTTCTGGATATATTTGTTGAGATTGGCTTGACTAGCATGGACTACTACGAAAATGATTTTGAAGATTTCTTGCTCAAAGATACTGCAGACTATTACTCTATAAAAGCCCAGACCTGGATTCTTGAGGACTCTTGTCCAGATTACATGTTAAAGGTATTCTCAAGAATGTTTCATGAACATCCCTATCTGTAGGTAAGCATAATATATATTTTTTCTAATGGTTGTTTGTTTCATAGGCAGAGGAGTGTCTGAAAAGGGAGAAAGAGCGAGTTGCTCATTATTTGCACTCCAGTAGTGAACAGAAGTTGTTGGAGGTTAGTGAATTGTCTGCTGTTGCTTCTACTCCACAGTCCACATTTTAGAGCATACTTTTTGATATTTAATCTACGTTTGCTAAGTGCATACACACCACATGTCCATATACAATTTATATTTGTATGTTCAGAAATCAGAATATATTTTTTTCCTGATAGAGCATTATGTATAATTCACTTTCTCCGGTATGACATGATTTTCACAGAAAGTGCAACATGAGTTGCTAACTCAATACGCAAGTCAGCTCCTGGAGAAGGAGCATTCTGGATGCCATGCATTGCTTCGTGATGACAAGGTTTCTTGGAGAAGCTCCACGTCTCTCAACAGTTTATCAGGAACAAATGAAGTCTGCTAACATAGCATCTTCTGTTTTACTCCAGGTTGATGATCTCTCTAGAATGTACAGGCTCTTTTCCAGAATAACTCGTGGTTTAGAACCTGTTTCTCAAATATTTAAGCAGGTATTTTGTTTTTCAGAAGAGAGTGGTTTATTTCTTAAATCTATTTTGATGATGTAATGGAATGTTGCTTCTGTGTAGCATGTTACTAATGAGGGCACTGCCTTAGTGAAGCAAGCCGAAGATGCTGCTAGTAATAAGAAGGTGCACAGTCTATATATTAACTTTTGTTTGTATTAATGTTGTCTTAGTACATTCATCTTATTGTGTACTTGGGGTGGTATCAATTGGTTAGGATATTTAATCAATTAGCTAGACTTTGTACTCAACTCTTGCTGGTAACATATGTAGTGATATTTACTCTGCTGATCTGTACATATAGCTCTGCACTCCGCCAAACACTTTGGATTTGCACTTGAAGTAATTTTGCTTTTTCTTTGTTATACTGCAGCCAGAGAAGAAGGAGATAGTTGGTTTACAGGAACAGGTTTTGTTTCAATAACTTTTTATATATTCTTTCGTGGCTCTACACTTGTTTCAATTACTCACTGTTTGTTATCTTAGGTTTTTGTCCGGAAAATCATTGAGCTTCATGACAAGTATGTAGCTTATGTTACGGATTGTTTTCAGGGGCACACTCTCTTCCATAAGGTTTGCTATTTGATATGCTCACACCATTATTGTCATAATGATATCAAAATATTGGATCATGTTCTGTATCCTGTTTATGCAGGCACTTAAGGAGGCTTTTGAAGTTTTTTGCAACAAAGGTGTTTCTGGCAGTTCAAGTGCTGAATTACTAGCTACCTTCTGTGACAATATCTTAAAGAAAGGCGGTAGTGAAAAGCTTAGTGATGAAGCAATTGAAGATACCCTTGAGAAGGTACAACCATCAATTTGTTATGTTTGATCTATTAGTGTCATTAGTAAGTCCTAATCTTGAATGGGTGATTACCAGGTTGTAAGGTTACTTGCCTACATTAGTGACAAGGACTTGTTTGCTGAGTTCTATAGGTAAGCTGTTATTATCTTGCATGCTTATTCTTTTTGTCTTTAAATTCTTGCGCATGGATTCATGCAGTTGTTAACCTCTGGGGCTAAATTTGCAGAAAGAAGCTTGCAAGGAGATTGCTTTTTGACAAGAGTGCTAATGATGAACATGAGAGAAGCATCCTTACCAAGCTAAAGCAACAATGTGGAGGGCAGTTCACTTCCAAAATGGAGGGCATGGTTACTGATCTCACTGTGGCAAGAGATCACCAGGCTAAATTTGAAGAGTTCATAAGCACACACTCAGAGTTGAATCCTGGAATAGCCTTAGCTGTTACTGTCCTCACAACAGGATTTTGGCCAAGTTACAAATCTTTTGATATAAATCTACCTGCAGAAATGGTAAGTTTGCCTTGAGGCTTTTAAAAGGCCGGAGTTTGCCTTATTTTGCATAAAATTTGTGGTTGGCATTCTGCTCTACACACAGTGATTGTTTTATTTTTTTATTTTTAGGTGAAATGTGTAGAGGTTTTCAAGGAGTTTTACCAAACAAGAACAAAACACAGGAAACTTACCTGGATTTATTCACTGGGAACCTGTAATATTAATGCTAAATTTGAGGCCAAAACTATTGAGCTCATTGTTACAACTTATCAGGTAGTTCGAAATCACATTATCCACTTCCCTCTTGTATTATGACTTCTGAAATGCCTTTCACTTTTGTTGGTAGGCTGCATTGCTGCTGCTGTTTAATGGAGTTGATAGACTCAGCTATTCTGAGATTGTGACACAGTTAAATCTCTCAGATGATGATGTTGTTCGATTGCTCCATTCTCTATCTTGTGCAAAATACAAGATTCTTAGCAAAGAACCAAATAATAGATCTATTTCACCAAATGATGTCTTCGAGTTCAACTCAAAGTTTACTGACAAGCTGCGAAGATTAAAGGTATCTTCAATTTATTTGTTTTATAGGTTTGATAATTTTCTTCTGGCAACATTGGTTATGTAGCTTCGGAAGTTTGTATTTTTAGTTTTATACCCCTCAAATTTTTGGGTTCATTTTATTACCAAGGTCACACCGTTGCATCTTTTAACCAATTCAATGATGCTGAGACCACCTGTTGTTATCTTTGATCATGTGGCCTCATCCGATCAGACAGCAAGGTTGGCTACCCAACCAAGAAGCCAACACAGGCTTGAATTAGTCTCCATATGCTCAGCCATTAAATTGTACACAAGCAAGCTGCACACCAACAAAAGAGAATGGAAACTATGGCAATGTAAGATGTAGAATGTGGCAGTGCTGGCAAAGGCATCATTGGCAGGTGCCAGTAAGCGGCCGCTAGCCAATATGGGTGCATGCTAAGGATGATGGTTTTGCGTCCTCAGTTCTGATAAATTAAAAAAAATAAAAAAAAAAACTCCCTCCGTCCCAAATTATAGGGCGTCCTCTTTTTAAGGAAAATCAAACTTGGTAATTTTTTTACTAATAATCATACTAATCATATATATGCTACATATTATGCATGTTATATCACTAGATTCATATTTGTTGGAAACATAACATGGTATAAATTAATGGTCAAGACCGTGTAAAAAAATATAGGCCTTATAATTTGGGATGGAGGGAGTACTAAGGAATATGTATAGAGTGGTAAAGAAAATCAGCAGTGAGATCTTCTGACGGCAATAAAGTGAACCCATATTCAGTGGTATAATATGAAAGCGTGAACTTCTGATGTTGCATAATCAATTATGCTTGTACTTTTCTGATTTCTCTGGTTCAATGTATTATCTTTGTGTTTGTGCTGTTTTTAGATACCTCTTCCTCCAGTTGATGAGAAGAAGAAAGTAGTTGAAGATGTTGATAAGGATCGCAGATACGCAATTGATGCATCAATTGTGCGTATTATGAAGAGTCGCAAAGTATTGGGTCATCAGCAACTTGTGATGGAATGTGTGGAGCAGCTTGGACGCATGTTTAAGGTACGAGTTATTTCTTCAAGAAAGTTCTTGCACTTGTTAGTGAAAGCATTTTAAACACACTCCATTTATGTAAGTGCTGGGCTCAATCCATTATGTTCTTTTAAGGTCATGGTGTTCCTACGAAATTCTTGGTACAACTCATTAATTGTACTTTGTTGATGTAGAGTTTGTTGATTGCCTTGATGGGCTAGCACCGTTTTGTTCAATTTGACTTGGACCACCGTCTTGTTGGTGTTTCCTTATTCTGAAATATACTGTAATTATTAAATATAATGAATCTGACATCCGGGAAATGTGTAAAGCACTTGTTTGCTCGAAACTCCTTTGATGTCTTCACCATCACAAGTTTTTTTCTCTTTTCCGTTGCAGCCTGACTTCAAGGCAATAAAGAAGCGAATTGAGGATCTTATCACAAGGGATTACTTGGAGAGGGATAAAGACAACCCAAATGTGTACAGATACTTGGCTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA001633