Os11g0297800
| Gene Name |
Os11g0297800 |
|---|---|
| Description |
Similar to Beta-D-xylosidase |
| Version |
NM_001074258.1 GI:115485164 GeneID:4350320 |
| Length |
5989 bp |
| Definition |
Oryza sativa Japonica Group Os11g0297800, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 11:11017212..11023200 |
| Sequence Coding Region |
11017266..11017703,11020168..11020449,11020536..11020705,11020822..11020919,11021529..11022889 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008404:11017212..11023200 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008404:11017212..11023200 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcggcggcggccttctcatgctgccatggcgccggcggcatggtggtgatcgtggtggtggtgatggcgatgttgggaggggtggtcgccggcggggagccgccgttctcgtgcggcggggcggcggcgggcggcgggcaggggtacgcgttctgcgacgcgacgctgccggcggagcagcgggcggcggacctggtggcgaggctgacggcggcggagaaggtggcgcagctcggggaccaggcggcgggcgtgccgcggctgggcgtcccggcgtacaagtggtggtcggaggcgctccacgggctggccacctccggcagagggctccacttcgacgcccccggctccgccgcgcgcgccgccaccagcttcccccaggtcctcctcaccgccgccgccttcgacgacgacctctggttccgcatcggccaggccatcggcacggaggcgagggcgctgtacaacattggccaggcagaggggctgaccatgtggtcccccaacgtgaacatcttcagggacccgcggtggggccgtggccaggagacccccggcgaggaccccaccatggcgagcaagtacgccgtcgcctttgtcaaggggatgcaggggaactcgtcggcgatcctccagacctccgcgtgctgtaagcacgtcaccgcgtatgacctcgaggattggaacggtgtccaacgctacaatttcaacgcaaaagtgacggcgcaggatctagaggacacatacaacccgccgttcaggagctgcgtggtggacgccaaggctacgtgcataatgtgcgcctacactggcatcaatggcgtcccggcctgcgcgaacgccgacctcctgaccaagaccgtcaggggagactggggcctggacgggtacatcgcctcggactgcgacgcggtcgccatcatgcgtgatgcgcagcgctacacacagacgccggaggacgccgtcgccgtcgccctcaaggccggattggacatgaactgtggcacctacatgcagcagcacgccacggcggcgatccagcaggggaagctgacggaggaggacatcgacaaggcgctcaagaacctcttcgccatccggatgcggctcgggcacttcgacggcgatcccaggagcaacagcgtgtacggcgggctcggggctgccgacatctgcacaccggagcacaggagcctcgcgctcgaggcggcgatggacggcattgtcttgctcaagaacgacgccggcatcctcccgctcgaccggacggcggtggcctccgcggcagtcattggccccaatgccaatgatggcctggccctcatcggcaactatttcggcccgccgtgtgaatcgacgacgccgctcaacggcatactggggtacatcaagaacgtgaggttcctcgctggttgcaattcggcggcctgcgacgtagccgccacggaccaagctgctgcggtagcgagctcttcggattatgtcttcctgttcatggggctcagccagaagcaggagagcgaagggcgcgacaggacaagcctgttgctccccggggagcagcaaagcctcatcaccgccgtagccgacgcggcgaagcgccctgtgatcctggtgctcctcaccggtggcccggtggacgtcacgttcgcgcagacgaacccaaagatcggcgccatcctgtgggctggttacccagggcaagctggtggtctcgccatcgccagggtgctcttcggtgaccacaaccccggtgggaggctgccagtgacatggtacccagaagagttcaccaaggtgcccatgacggacatgcggatgcgtgccgacccagccaccggctaccctggccggagctatcgcttctaccagggcaagaccgtctacaagttcggctacggtctcagctactccagctactcacgtcagctggtctctggtggtaagccagcagagtcctacaccaacctacttgctagtctgaggacaacaacaacatcagaaggtgatgagagctaccacattgaagagatcggcactgacggctgtgagcagctcaagttcccggcggttgtggaggtgcagaaccatggccccatggatggcaagcactctgtgctcatgtacctccggtggccgaatgctaagggcggccgcccgacaacccagctgatcggtttcaggagccagcatctcaaggtaggggagaaggccaacatcaggtttgacatcagcccatgtgagcacttcagcagggtaaggaaagacggcaagaaggtgatcgacagagggtctcactacctcatggttgacaaggatgagttagagattagattcgaggcctga</cdnaseq> |
| Protein Sequence |
<aaseq>MAAAAFSCCHGAGGMVVIVVVVMAMLGGVVAGGEPPFSCGGAAA GGGQGYAFCDATLPAEQRAADLVARLTAAEKVAQLGDQAAGVPRLGVPAYKWWSEALH GLATSGRGLHFDAPGSAARAATSFPQVLLTAAAFDDDLWFRIGQAIGTEARALYNIGQ AEGLTMWSPNVNIFRDPRWGRGQETPGEDPTMASKYAVAFVKGMQGNSSAILQTSACC KHVTAYDLEDWNGVQRYNFNAKVTAQDLEDTYNPPFRSCVVDAKATCIMCAYTGINGV PACANADLLTKTVRGDWGLDGYIASDCDAVAIMRDAQRYTQTPEDAVAVALKAGLDMN CGTYMQQHATAAIQQGKLTEEDIDKALKNLFAIRMRLGHFDGDPRSNSVYGGLGAADI CTPEHRSLALEAAMDGIVLLKNDAGILPLDRTAVASAAVIGPNANDGLALIGNYFGPP CESTTPLNGILGYIKNVRFLAGCNSAACDVAATDQAAAVASSSDYVFLFMGLSQKQES EGRDRTSLLLPGEQQSLITAVADAAKRPVILVLLTGGPVDVTFAQTNPKIGAILWAGY PGQAGGLAIARVLFGDHNPGGRLPVTWYPEEFTKVPMTDMRMRADPATGYPGRSYRFY QGKTVYKFGYGLSYSSYSRQLVSGGKPAESYTNLLASLRTTTTSEGDESYHIEEIGTD GCEQLKFPAVVEVQNHGPMDGKHSVLMYLRWPNAKGGRPTTQLIGFRSQHLKVGEKAN IRFDISPCEHFSRVRKDGKKVIDRGSHYLMVDKDELEIRFEA</aaseq> |
| Gene Sequence |
<dnaseqindica>55..492#2957..3238#3325..3494#3611..3708#4318..5678#ctgaacaccctcgccgccgcgacacacatcgccgtcgtcggaggaggagacaccatggcggcggcggccttctcatgctgccatggcgccggcggcatggtggtgatcgtggtggtggtgatggcgatgttgggaggggtggtcgccggcggggagccgccgttctcgtgcggcggggcggcggcgggcggcgggcaggggtacgcgttctgcgacgcgacgctgccggcggagcagcgggcggcggacctggtggcgaggctgacggcggcggagaaggtggcgcagctcggggaccaggcggcgggcgtgccgcggctgggcgtcccggcgtacaagtggtggtcggaggcgctccacgggctggccacctccggcagagggctccacttcgacgcccccggctccgccgcgcgcgccgccaccagcttcccccaggtcctcctcaccgccgccgccttcgacgacgacctctggttccgcatcggccaggtacgtacgttcgtatccgcaactgtgcgcgcctttcccggcccgcaccggcgatccgacggcgcggcggcgccgccgccgcggccattatgggtcgccgggcccgtggacgaaggcgcgcgagcgcgccatgcacgacgcatgagcattttgggggtgtttttttttggttttttttttagctcgttgcggtctcggggggttttgtgatccgtgacaaaaagggacaaagtggcgaggggttatgttaagaattactcgtcgacgtgactgtgggatctgggatcgatctgtcaacagtaattgtaaattagtgcaaattaatttattagctactccctccttgtttaaatttgattttgtttattcgaaattttagaatttaacaaccaatagctcttaaagtatggcagaatgtttctttgcaagtacttctacaatattagagttttgttacatattatcgttagtctaataaaaaaaatagtgatcaaaattgcaaaccaatgataagtaaaattaatagtatcatcatatatatgaaatagagatactagctaataaattctattgacatgtgcgcacagcgtatcaatgggtataaccgcttaagacacacgtgttagaaacaaatatgtgagaaacactcaggggtcttccggttagctccacaagttggtgggctagccgatctaagttcgaagtctcaccccttttaattattttgttaggaacaaatctgtctagtgagcgcacccacgtgtgtgtaaaatttgcctagcatttgaatccctggattggttgaattcacacacctatggctctatggtcacaccaaaagcatttctcccttaaatttaataaaatcgagtcgtggaacttggaagtgttgattgttcacacaacttaatttgtggaaacttgtaagtcaacctctgcgactattaagttgatcaacgtaactaagctagatgccaattgtgcttgttttttcttcatagaggtttggtggaagtgcacttaattaggttttggaccaaagacaaaataaggaatttgtcccgtttagaatgtatattcttacccaacattgatagggtgtgttcggaggtggtggtcgggaacttcgcctcagtattagctaaaataaacttgaaaataaattaatatgatattttaaaataactttcctataggcttttattttgaagtggaagcggcaaaagctttgccgattatattaggagatcagaaattaatgcagtctagctgttgcgcttatacatattgcgctaatacagaattacattgaaaccctttaggctagaaaagcttcaactagggattaaaggtagagaagatagcaatgatcctataggcatataaaaaatacaccgtgagtttggccttatatacttctttctgtagggagatttttcgcatataaaacagggctttaccaagtccaaatactactaattaatatattatcactactattattccatgtccaaaaaccttgggacaaactgctggggtcaactaggaattaaagatgtagcggccacaccacacgtgaatatgtgcggttcgtgccaaagacaagcagcagaatgtttctgcgagaaaagaggcgacttttttctcgtgttaggacgtcacatgtgactggtacatgcatccgtatgagtatgtagatcggacctttgcaactgtacctaccacctaatctttttgttgagtcctctccgtgggtatggagtgaccacatgctatgaatctttaaattctttcctaagagctggcaatggcttatttatggctttattaataagtaagcattaataagttttttttttaaaaaagtaagcattaaccaatgtgtcaacacatggcgtagaaaaactatatattagggtgggcatttgtcatcttccttacaaatcgatctaatcagttgagatacggttgataagccaatgtcatgtaaatggagcaactaaaaataacttatgggtgaaacttttgaagagaaatatttattagcattcgtacaattgaaactatgtcagacaaaatgaacatatgctcttcttttccgatttggccattaaagccatcccagcacttacacaaccagtacccttgggcctcacgttcttgccgcattggcaccttaaatatttcacaaagtttcatttcacctccatagcttcatcgatcaggtgtaggcaaaaagcgaacagggagcgcttcattattagcttcactaatactttcggtattctctttgcaaaaagggtctcaccatgtggtcaccaatcgtgtgttgcaagcatgcgtgcatataccagctcatatcactcactctggattattgcatttgcgtgccacgtgaaatgcacacatttggccgaaatataatcatcacgaaaaggcacattgtgtgtacaccatcatgtaggccatcggcacggaggcgagggcgctgtacaacattggccaggcagaggggctgaccatgtggtcccccaacgtgaacatcttcagggacccgcggtggggccgtggccaggagacccccggcgaggaccccaccatggcgagcaagtacgccgtcgcctttgtcaaggggatgcaggggaactcgtcggcgatcctccagacctccgcgtgctgtaagcacgtcaccgcgtatgacctcgaggattggaacggtgtccaacgctacaatttcaacgcaaaagtgagtcccgtcacactactatatatagacagacgggtcattagtgacggttcgaaaccgtgcattattggtattgttttttttaggtgacggcgcaggatctagaggacacatacaacccgccgttcaggagctgcgtggtggacgccaaggctacgtgcataatgtgcgcctacactggcatcaatggcgtcccggcctgcgcgaacgccgacctcctgaccaagaccgtcaggggagactggggcctggacgggtacgtgagtcaagtcatgtcttcgttgttgtttgattccgtgatgaatttagtcatgtcatcacgagtgctgatgcgtcttgggttttggttttggggctggttgcttgctgcaggtacatcgcctcggactgcgacgcggtcgccatcatgcgtgatgcgcagcgctacacacagacgccggaggacgccgtcgccgtcgccctcaaggccggtacgtgctggctcgtgatgacgatggtcaattcgtcactttctccaatagcatttacctaaagaaggaaactgttttaatccctcgaggggatatatatcccctcgttctttccatgtcacttaaatggttataaaaaaatttgaaaaaaattagaaaggtgtgttaacatgtgatataacactccacaaacatgcaagttcaaattcaacttctacatctcgtaacgaaaaaaacaaattgaaccgcagctagttaacgtatattcagagtcaaatttgtttttttcgttgcgagatatagaagttgaatttttacttgcatgtttgtggagtgatatatcacatattaatacatcttcttaaattttttcaaattttttcataaccatttgagtgacatgcaaacaacgaggggatatcccctcgagggatcaaaatcctcttcccctaaagaagacaagcttaagtattataaagtgaaagctggactgattcatttaaccaacgccaattggacagagaaacaattcggttcatcagaagcttaattgttccaaaaataacttggacagatttggattaattttaagtgatttgggaatttcaggattggacatgaactgtggcacctacatgcagcagcacgccacggcggcgatccagcaggggaagctgacggaggaggacatcgacaaggcgctcaagaacctcttcgccatccggatgcggctcgggcacttcgacggcgatcccaggagcaacagcgtgtacggcgggctcggggctgccgacatctgcacaccggagcacaggagcctcgcgctcgaggcggcgatggacggcattgtcttgctcaagaacgacgccggcatcctcccgctcgaccggacggcggtggcctccgcggcagtcattggccccaatgccaatgatggcctggccctcatcggcaactatttcggcccgccgtgtgaatcgacgacgccgctcaacggcatactggggtacatcaagaacgtgaggttcctcgctggttgcaattcggcggcctgcgacgtagccgccacggaccaagctgctgcggtagcgagctcttcggattatgtcttcctgttcatggggctcagccagaagcaggagagcgaagggcgcgacaggacaagcctgttgctccccggggagcagcaaagcctcatcaccgccgtagccgacgcggcgaagcgccctgtgatcctggtgctcctcaccggtggcccggtggacgtcacgttcgcgcagacgaacccaaagatcggcgccatcctgtgggctggttacccagggcaagctggtggtctcgccatcgccagggtgctcttcggtgaccacaaccccggtgggaggctgccagtgacatggtacccagaagagttcaccaaggtgcccatgacggacatgcggatgcgtgccgacccagccaccggctaccctggccggagctatcgcttctaccagggcaagaccgtctacaagttcggctacggtctcagctactccagctactcacgtcagctggtctctggtggtaagccagcagagtcctacaccaacctacttgctagtctgaggacaacaacaacatcagaaggtgatgagagctaccacattgaagagatcggcactgacggctgtgagcagctcaagttcccggcggttgtggaggtgcagaaccatggccccatggatggcaagcactctgtgctcatgtacctccggtggccgaatgctaagggcggccgcccgacaacccagctgatcggtttcaggagccagcatctcaaggtaggggagaaggccaacatcaggtttgacatcagcccatgtgagcacttcagcagggtaaggaaagacggcaagaaggtgatcgacagagggtctcactacctcatggttgacaaggatgagttagagattagattcgaggcctgagttttagatggagggaaggaattacaggtggtgcatacggtgcaattctttcactgtataatttatttgttgcagtggttatgattcagttgcctcggaaactgaggtttctaggctccaggagatgtgtttagcaccttttcaggtatagctcacacattattccagaccagaaatgtctcccagactcccggtatctttgaaatggatagtctggggaacatgtaaaatggattattgatttaccacctcacaattaacgagcaataatattttatacccttctctgtatttagagtgcaatgcaaact</dnaseqindica> 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| External Link(s) |
