BGIOSGA001640

From RiceWiki
Revision as of 10:24, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA001640| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA001640, complete gene.| tag = B1329D0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA001640

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA001640, complete gene.

LocusTag

B1329D01.2

Ensembl Transcript ID

BGIOSGA001640-TA

Ensembl Protein ID

BGIOSGA001640-PA

Length

1746

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:16610429..16612174

Sequence Coding Region

16611991..16612174,16611717..16611832,16611276..16611448,16610732..16610825,16610429..16610527

Genome Context

<gbrowseImage1> name=IndicaChromosome01:16610429..16612174 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:16610429..16612174 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGCGGCGCCGCCGTCTCCAGCCTGCTTGCCACCCCAACACCGACCTCTCGACCTCGACCCGTCTCCACCACCACCGCCCCCTTCTCCGTCAACCTCTCCACCGCAGCTGCCCGCGCACCTCGCCTCCTCCTCCTCTCGCGCCGCCCTCGCCCTCGCCCTCGCCCCGCCGCCGCGGTTCTCGGGGTGTCTGATGATACAGGGGTCAAGATGGCTGGCTCCGACATTGTTGGCAAGAACGATTTGCTGATTGTTGGCCCTGGAGTGCTTGGTCGACTGGTAGCTGAGAAATGGCAGGAGGAACATCCAGGATGCAAAGTTTTTGGCCAGACCACAAGCACAGATCACCACAACGAATTGTCGAATATTGGCATCATTCCCTCCTTGAAGGGATCCACTTTTCCTCAGAAGGTTCCATATGTTATTTTCTGTGCTCCCCCATCTCGTTCGGATGATTACCCTGGGGATGTGAGAGTAGCTGCCTCAAATTGGACTGGTGAAGGCTCTTTTGTTTTTACATCAAGTACTGCTCTGTACGATTGTAGTGACAACGAATTGTGCAATGAGGATTGCCCATCTGTGCCAATTGGCAGAAGCCCTCGTACTGACGTCCTTCTAAAAGCAGAGAATGTTGTTCTTGAGGCAGGAGGCTGTGTCTCAGGCTAG</cdnaseq>

Protein Sequence

<aaseq>MGGAAVSSLLATPTPTSRPRPVSTTTAPFSVNLSTAAARAPRLLLLSRRPRPRPRPAAAVLGVSDDTGVKMAGSDIVGKNDLLIVGPGVLGRLVAEKWQEEHPGCKVFGQTTSTDHHNELSNIGIIPSLKGSTFPQKVPYVIFCAPPSRSDDYPGDVRVAASNWTGEGSFVFTSSTALYDCSDNELCNEDCPSVPIGRSPRTDVLLKAENVVLEAGGCVSG</aaseq>

Gene Sequence

<dnaseqindica>1..184#343..458#727..899#1350..1443#1648..1746#ATGGGCGGCGCCGCCGTCTCCAGCCTGCTTGCCACCCCAACACCGACCTCTCGACCTCGACCCGTCTCCACCACCACCGCCCCCTTCTCCGTCAACCTCTCCACCGCAGCTGCCCGCGCACCTCGCCTCCTCCTCCTCTCGCGCCGCCCTCGCCCTCGCCCTCGCCCCGCCGCCGCGGTTCTCGGTAACCACATCTCTCTCTTTCTCTCTCCACCTCGGATTATCTTGTTCTCCTATGTTTGCGGTACCATGTACCATTGTGAGGGTGAGGGTGCATGGGAACGAGATGGGCTTGCAATTGGATGACTCTTTGTTACTTGGGTTTTGGTGCTTCCAATCCAGGGGTGTCTGATGATACAGGGGTCAAGATGGCTGGCTCCGACATTGTTGGCAAGAACGATTTGCTGATTGTTGGCCCTGGAGTGCTTGGTCGACTGGTAGCTGAGAAATGGCAGGAGGTATTATTATCAGATTGCCCGCTTGTTATACTCTCTCAGTTATTTACCTTGTGTCCCCTATTGGTTTAAACTTCGAAAACCATATTCCTCTTTCATCGTGTGGAGCATAATATTTTTTTTTGGTTCAAAATGGCGTATCTACTTTTGTTGCTTCTGTAATACTAGGATTTTTAATATTTAATCTTCTGATTAACATAAAAAAATGATGCCGCACTGTTAATTCGTTTAATTGAGTACAATAATAATGTACACTGTCCATACTCTGTAGGAACATCCAGGATGCAAAGTTTTTGGCCAGACCACAAGCACAGATCACCACAACGAATTGTCGAATATTGGCATCATTCCCTCCTTGAAGGGATCCACTTTTCCTCAGAAGGTTCCATATGTTATTTTCTGTGCTCCCCCATCTCGTTCGGATGATTACCCTGGGGATGTGAGGTAAATGAGTACGATTATAATGATGAATCCATGATTATATTATTGTTAACAGTATCATCCTACCTTCTGGTATCATGTGAGTTCCTAATGGCTAAGGTCCATTGGTTACTCCTAAACATTTATTTTCTTTTTAACACATAAACTATCCAAATTTGTGTTTATAGTGTATAGTGGTATTTTGCTAATGAATATGCCTCTGGCAACATTTGCTTGTGGGTGTAAGTTTCTTTTTTGAGAGGAGGGGTTTGAATTATTTTCCTTGAAGGCCAGAACCATGATACGCAACTCTCTTGCGTATTCAAGAAAAAAAGAACCATTCCAGAACAAAATATTATTGAATCATTGTTGTAATAGTTCCATTCCAATGATATGAACCATTCATCTATCTTGCACTAATCGAAACGCATACATGGACATGTGATGTATTCTTATTTCAGAAAATGCGTGCAGAGTAGCTGCCTCAAATTGGACTGGTGAAGGCTCTTTTGTTTTTACATCAAGTACTGCTCTGTACGATTGTAGTGACAACGAATTGTGCAATGAGGTATCCCCACAAGCCTGCAGATTGTAGCTGTGAAGTCTTCCATACTTTTCTTTTTGGCTCTTTTCATTTATAGAAGTTCTAGTGACATTAAAAAAAAAACAATGTATCCACAAGCCATATTATGCAACTCTAAATATTTTTTCTTGACGGTTGAAAAACTTTATTGTTTTTGTTTTAACCATAATTATTCCTCCCATTATGTAGGATTGCCCATCTGTGCCAATTGGCAGAAGCCCTCGTACTGACGTCCTTCTAAAAGCAGAGAATGTTGTTCTTGAGGCAGGAGGCTGTGTCTCAGGCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA001640