BGIOSGA001658

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Revision as of 10:24, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA001658| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA001658, complete gene.| tag = OsI_019...")
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Gene Name

BGIOSGA001658

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA001658, complete gene.

LocusTag

OsI_01905

Ensembl Transcript ID

BGIOSGA001658-TA

Ensembl Protein ID

BGIOSGA001658-PA

Length

2950

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:16333411..16336360

Sequence Coding Region

16336268..16336360,16335652..16335773,16335432..16335540,16335164..16335372,16334694..16335063
,16334397..16334510,16333965..16334050,16333411..16333711

Genome Context

<gbrowseImage1> name=IndicaChromosome01:16333411..16336360 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:16333411..16336360 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTATGGTCAGCGTTGAGAACAACCTTTCTCCTCCAAAAACTCTGCAGAAGTTGTCAGATAGTCTCACTTCCATGCTGCCTTTGCTTTCAGAATTGGCAGATATCATACCAAGGGATACTCTTTTCTGGAAACTCAAGCTGCTGAAGTCAGGAGCAGCCTACGCTAACTCTCGTCTTCATGCTGTACAAGCTGAAGTTCTACTTCTTGCTAGTGGCAATGATAATCTTCTGCCAAGTGGAGAAGAGGCAGATAGACTCTTCAAATCACTGAAAAACTGCAGAGTTCGGTACTTCAAAGACAATGGCCATACACTACTGTTGATCCTTAGGAAACAGAATCTACAAAAATACCAAAGGAATCTCCTCATGCAAGCACTACCTAACTATTTTGGACAGGAGGACGGTGTTAATCTTTTATCAGTCATAAAAGGAGTAAATATGTACCGCCGTGGCAGACAACGGGATCCTGTGACGGATTACATTCCCCCGACATTGAGTGAGTTCAAGAAAACATTCGATGAAGATCACAAATTGTTTCACCTTGCATTGAGCCCAGTCATGCTGTCTACCCTGAAGAATGGGAAGATTGTTCGTGGCCTTACTGGTGTTCCTGACCAAGGTCCTGTCTTGTTTGTGGGTTATCATGCACTGATGGGGATCGAGTTGAGTCCATTGTACGAGGAGTTCTTGAGAGAGAAGAGAACAAGTTTCCGTGGTATGGCTCACCCAATTTTATTTGGAGGAAAACATGAGAGTTCGCGACAGGAGCTGTCTCGGTTCGATACAATTTCTATGTACGGTGGATTACCAGTCACTGCGATCAATATGTATAGGTTGTTTGAGAGAAATCAATTTGTTTTGCTCTATCCAGGCGGTGTGCGGGAAGCTCTTCACAGGAAGGGTGAAGCATACAAGTTGTTTTGGCCAGACCAACCAGAATTTGTAAGAATGGCAGCACGTTTTGGTGTTACTATCATACCATTTGGTTTTGTAGGAGAAGATGATGTTTTAGAGTTGGTCGCCGACTACAATGATCAAAAGAACATTCCCTACCTTCGGGAATGGATTGAGTCGATTAACCGAGAAGCCCAAAGAGTAAGGGATAGCGTCAAAGGAGAGGATGGAAATCAAGACGTTCACATACCTGCTTTGCTCCCCAAAGTGCCAGGCCGGTTCTACTACCTATTTGGCAAACCAATCGAAATGAAAGGTATGGATAATGTCGTCAGAGATAGGAAAAGTGCAAACGAAGTGTATTTGCATATCAAATCCGAAGTAGAGAGCTTAATGTCATATCTGAAGAGGAAGAGGGAGGAAGATCCTTACAGAAGCATAGCGCAGCGTGCAGTGTACCAGGCATCTTGGGGTGCTTCTGCAGAGGTCCCAACATTTGAACCATGA</cdnaseq>

Protein Sequence

<aaseq>MAMVSVENNLSPPKTLQKLSDSLTSMLPLLSELADIIPRDTLFWKLKLLKSGAAYANSRLHAVQAEVLLLASGNDNLLPSGEEADRLFKSLKNCRVRYFKDNGHTLLLILRKQNLQKYQRNLLMQALPNYFGQEDGVNLLSVIKGVNMYRRGRQRDPVTDYIPPTLSEFKKTFDEDHKLFHLALSPVMLSTLKNGKIVRGLTGVPDQGPVLFVGYHALMGIELSPLYEEFLREKRTSFRGMAHPILFGGKHESSRQELSRFDTISMYGGLPVTAINMYRLFERNQFVLLYPGGVREALHRKGEAYKLFWPDQPEFVRMAARFGVTIIPFGFVGEDDVLELVADYNDQKNIPYLREWIESINREAQRVRDSVKGEDGNQDVHIPALLPKVPGRFYYLFGKPIEMKGMDNVVRDRKSANEVYLHIKSEVESLMSYLKRKREEDPYRSIAQRAVYQASWGASAEVPTFEP</aaseq>

Gene Sequence

<dnaseqindica>1..93#588..709#821..929#989..1197#1298..1667#1851..1964#2311..2396#2650..2950#ATGGCTATGGTCAGCGTTGAGAACAACCTTTCTCCTCCAAAAACTCTGCAGAAGTTGTCAGATAGTCTCACTTCCATGCTGCCTTTGCTTTCAGTATGTTATTATCATACCTTATTTTCATTTCCTCATCTGGTTCTATCTATTACTCATTTTTACATAAACAACAACATGTGCATGAGGAATATCTACATTTTTATGCTTTTAAACTTAAAAGTAATGACTAAATTTTAAAACATTACTAGCTAAATGTTGCCACTTTTATCTATGGATCCAGATAAGCATTTTCAAATAACTAAGTTTTTTGTAATTTGAAACTTTTGCTCCAATGGCAGAATACATGTATTGAAAGAAATGCTTTTACAAAGTAATGCTTTTTCAGATCACATCGTGAAATGTTGGGGCAGCATGTATTTCTTTTAGCTCTTTTTGTTTTTTTAAAAAAAAAACCAAATTAGCTCTTTCTTTTAGCCGTAGTGCAGCTGAAATCAGCTACAATTTGGGCATTCTCAAGGAGATACATAATACTTCGTACTATTTGAGAAAACATTTCATCTAATTATTTTTCATTCCTTTTTGTTATTTCTCAGGAATTGGCAGATATCATACCAAGGGATACTCTTTTCTGGAAACTCAAGCTGCTGAAGTCAGGAGCAGCCTACGCTAACTCTCGTCTTCATGCTGTACAAGCTGAAGTTCTACTTCTTGCTAGGTAGCCTGAATGCCTGATACATGACACTACAGCATGTATTCTGTAGTTCTATAATCTGGATTAATCCTATAAATTCGGTCTTATGCTGAAACACTAAATACTTTTATTCAGTGGCAATGATAATCTTCTGCCAAGTGGAGAAGAGGCAGATAGACTCTTCAAATCACTGAAAAACTGCAGAGTTCGGTACTTCAAAGACAATGGCCATACACTACTGTTGGTATGACGCATCACACTTCAATTTTATAGTAACCTGTTTTATTGGGGAATTGGCTTCAGATCCTTAGGAAACAGAATCTACAAAAATACCAAAGGAATCTCCTCATGCAAGCACTACCTAACTATTTTGGACAGGAGGACGGTGTTAATCTTTTATCAGTCATAAAAGGAGTAAATATGTACCGCCGTGGCAGACAACGGGATCCTGTGACGGATTACATTCCCCCGACATTGAGTGAGTTCAAGAAAACATTCGATGAAGATCACAAGTATGTTAACGCACTATGAGAATTCAAAATTCTATTTTACTTTTGCATGTAATTTTGCCATATAAATGAATCAGTAATTAGCGAACTAAAACTTCTGCAGATTGTTTCACCTTGCATTGAGCCCAGTCATGCTGTCTACCCTGAAGAATGGGAAGATTGTTCGTGGCCTTACTGGTGTTCCTGACCAAGGTCCTGTCTTGTTTGTGGGTTATCATGCACTGATGGGGATCGAGTTGAGTCCATTGTACGAGGAGTTCTTGAGAGAGAAGAGAACAAGTTTCCGTGGTATGGCTCACCCAATTTTATTTGGAGGAAAACATGAGAGTTCGCGACAGGAGCTGTCTCGGTTCGATACAATTTCTATGTACGGTGGATTACCAGTCACTGCGATCAATATGTATAGGTTGTTTGAGAGAAATCAATTTGTTTTGCTCTATCCAGGCGGTGTGCGGGAAGCTCTTCACAGGAAGGTGCGTTTAATATCTCTAATTTGCATCGACAAATATGAAATATATGGTCATAAATATATCAAGTCAGAATTAACTAAATCGCACATGTACTGATCTTGTCAGTCATGAAAAAATGTCAGTGTTCTGCATAGAAAAAAAAAACATCTTTTGCCCTTACTGTAATGATTCTGTTGTACTTTGCAGGGTGAAGCATACAAGTTGTTTTGGCCAGACCAACCAGAATTTGTAAGAATGGCAGCACGTTTTGGTGTTACTATCATACCATTTGGTTTTGTAGGAGAAGATGATGTTTTAGAGGTAAACTTCCATCTATTTCTCCTCCACCATATATCTAAAATTTTCAGATGTGCGACTAATTCTTTTTCAGAAGAAAATTTTGATTCTCTCTCTAAAAAAGGAGAAATGTTGCAAATATGCCTGTGATTTTTGCTGACCTCCTGCAAAATACCACTCTATCAGTTCTTGTGTGAAAAACAAGGATGCCATGCATCTTAGCACTGTTTCCTTTTTTTTCTTCAAGAAGCAGAGTCATCAAATAACCACACATGCATGATTGCTCTATATCTTGTGTGGTGGTGATGCAGTTTCTGTTTGTGGTTATCCATCTTGTTTCTATGACGAGTAAACATTCTTGTTTCTGCAGTTGGTCGCCGACTACAATGATCAAAAGAACATTCCCTACCTTCGGGAATGGATTGAGTCGATTAACCGAGAAGCCCAAAGAGTAAGGTAAGATTTCTATCATCCCTTCGTATTTTGGCTTTCTCAACAGGGGTAATCGCCCCATATCACGATGACTTTAGAACTTCGGCTAAATACTACAAAATTCAAAGCTTGACAAAAACATCACTCAGTTTGCCACAACTTAACCTCATGATAGTGCAAGTAAGAATATTACTACAAGAATCTTGCCACAAAGTGATGGGATTGCAAAAGAGCACACTTTTATTTGTTCATTATGTGTTCACATAATTTGTTTCAGGGATAGCGTCAAAGGAGAGGATGGAAATCAAGACGTTCACATACCTGCTTTGCTCCCCAAAGTGCCAGGCCGGTTCTACTACCTATTTGGCAAACCAATCGAAATGAAAGGTATGGATAATGTCGTCAGAGATAGGAAAAGTGCAAACGAAGTGTATTTGCATATCAAATCCGAAGTAGAGAGCTTAATGTCATATCTGAAGAGGAAGAGGGAGGAAGATCCTTACAGAAGCATAGCGCAGCGTGCAGTGTACCAGGCATCTTGGGGTGCTTCTGCAGAGGTCCCAACATTTGAACCATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA001658