BGIOSGA001682

From RiceWiki
Revision as of 10:24, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA001682| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA001682, complete gene.| tag = P0458A0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA001682

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA001682, complete gene.

LocusTag

P0458A05.31

Ensembl Transcript ID

BGIOSGA001682-TA

Ensembl Protein ID

BGIOSGA001682-PA

Length

3843

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:15904346..15908188

Sequence Coding Region

15907406..15908188,15906448..15906518,15906259..15906352,15906074..15906172,15905427..15905513
,15905222..15905341,15904800..15904903,15904533..15904605,15904346..15904408

Genome Context

<gbrowseImage1> name=IndicaChromosome01:15904346..15908188 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:15904346..15908188 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGCGCGCTCACCGACAGCCGCAAGCGCCTCTCCGCCGACCACCGCCTCCTCCCCTCCTTCCCTCCCTCCCCGCCGCCTCCCTCCAAGAAGCCCAAGCTCGCGCCCCTCCCCTCCTCCTCATCCCTCGCCGACGCCTCCTCTCCGCCTCCCTCTCCGCCGCCCCCTCATCCCTCCTCCTCCTCCGCCGCCGCGCAGGGCCCCTCCTCCTCGTACTCCGCCGCCGCCGCCGCCGCCGCCGGAGGTGCCTCCACCTCGTACGCTTCCTCCTTGCCCCCCAGCCGCCACCGCCGCCTGCCTCCGCCGCCGCCGCACCCGCGCCCAATCCACGGGCCCCAACGCGTCCTCCGCGCGTTCCGCCTCGGTTCCGCGCTCCCCCGCTCCAATCCGTCGTGCTTCACCCCGTCCCCTTCGTCGCCGCAGCATCCGCGGTCTCTCGGCCTCGAGCAGTATGTCGAGCTCGTCAACAGCGTCGCCCACCCGCCGCCGCTGCCGCCTTCTCCTTCCACCGCCGATGCGCCGTCGAGGGTGGAGGTGATCGCTGTCGACGATGCGGAGGAGAGGAAAGATGACGAGGAAGCGCGAGAAGAGGAGGAGGAGGAGGTGAAGGGTAGCGTTGTTGTGAGGAGGGTCCCCCTCTACAAGGAGCTCTATGAGGCTTCCAGCCGGCGACGGGACGCCAAGCTCAGGACACTCGAGTTTGAGGTGCGCCTCGCAGAGAAGGGCCGCCTTGGCCTTGAGCAGCTCGCCGATGTCCTCCCACGGTTCGGGCCCCGGAAGGAGGATGAACCTTTTGTTCCTTTTACGGATGAGGATGAGGATAGTGTTGATCATGCTCTTGGTGGCCGTAACAGACGTGAAAGGCTAGTGGTACATGAATCATCAAATATTGTCATAACAAGAGAGACCTTGCAGTGCTTGAACGAAACGGAGTGGCTAAATGATGAGGTCATAAATTTGTATCTTGAGCTGCTGAAAGAGAGGGAGCTGAGAGAACCTAACAAGTTTTTGAAATGCCACTTCTTCAATACCTTTTTCTACAAAAAGCTCATTACTGGTGGGTATGATTATAAGTCTGTCAGAAGATGGACAACTAAAAGGAAGTTAGGTTACAGCCTACTTGAATGTGATAAGATCTTTGTTCCTATACACAAGGAAGTGCATTGGTGTTTAGCAGTCATAAACATAAGGGACAAAAAGTTTCAATTTCTGGATTCACTTGGCAGCATGGACATGAAGGCATTGAGAACTTTAGCAAGGTATCTTGTAGATGAGGTGAAAGATAAGAGTGGCCAACATATTGATGCTCTTTCATGGAAGCAGGAGGGTGTAAAAAACCTTCCTTTGCAAGAGAATGGGTGGGATTGTGGCATGTTCATGCTCAAATACATAGATTTCTACAGCAGAGATATGGGCCTTACTTTTGGACAGAAACATATGCATTACTTTCGGAAGAGGACTGCCAAGGAAATTTTGAATTTGAGGGCTGAATAA</cdnaseq>

Protein Sequence

<aaseq>MGALTDSRKRLSADHRLLPSFPPSPPPPSKKPKLAPLPSSSSLADASSPPPSPPPPHPSSSSAAAQGPSSSYSAAAAAAAGGASTSYASSLPPSRHRRLPPPPPHPRPIHGPQRVLRAFRLGSALPRSNPSCFTPSPSSPQHPRSLGLEQYVELVNSVAHPPPLPPSPSTADAPSRVEVIAVDDAEERKDDEEAREEEEEEVKGSVVVRRVPLYKELYEASSRRRDAKLRTLEFEVRLAEKGRLGLEQLADVLPRFGPRKEDEPFVPFTDEDEDSVDHALGGRNRRERLVVHESSNIVITRETLQCLNETEWLNDEVINLYLELLKERELREPNKFLKCHFFNTFFYKKLITGGYDYKSVRRWTTKRKLGYSLLECDKIFVPIHKEVHWCLAVINIRDKKFQFLDSLGSMDMKALRTLARYLVDEVKDKSGQHIDALSWKQEGVKNLPLQENGWDCGMFMLKYIDFYSRDMGLTFGQKHMHYFRKRTAKEILNLRAE</aaseq>

Gene Sequence

<dnaseqindica>1..783#1671..1741#1837..1930#2017..2115#2676..2762#2848..2967#3286..3389#3584..3656#3781..3843#ATGGGCGCGCTCACCGACAGCCGCAAGCGCCTCTCCGCCGACCACCGCCTCCTCCCCTCCTTCCCTCCCTCCCCGCCGCCTCCCTCCAAGAAGCCCAAGCTCGCGCCCCTCCCCTCCTCCTCATCCCTCGCCGACGCCTCCTCTCCGCCTCCCTCTCCGCCGCCCCCTCATCCCTCCTCCTCCTCCGCCGCCGCGCAGGGCCCCTCCTCCTCGTACTCCGCCGCCGCCGCCGCCGCCGCCGGAGGTGCCTCCACCTCGTACGCTTCCTCCTTGCCCCCCAGCCGCCACCGCCGCCTGCCTCCGCCGCCGCCGCACCCGCGCCCAATCCACGGGCCCCAACGCGTCCTCCGCGCGTTCCGCCTCGGTTCCGCGCTCCCCCGCTCCAATCCGTCGTGCTTCACCCCGTCCCCTTCGTCGCCGCAGCATCCGCGGTCTCTCGGCCTCGAGCAGTATGTCGAGCTCGTCAACAGCGTCGCCCACCCGCCGCCGCTGCCGCCTTCTCCTTCCACCGCCGATGCGCCGTCGAGGGTGGAGGTGATCGCTGTCGACGATGCGGAGGAGAGGAAAGATGACGAGGAAGCGCGAGAAGAGGAGGAGGAGGAGGTGAAGGGTAGCGTTGTTGTGAGGAGGGTCCCCCTCTACAAGGAGCTCTATGAGGCTTCCAGCCGGCGACGGGACGCCAAGCTCAGGACACTCGAGTTTGAGGTGCGCCTCGCAGAGAAGGGCCGCCTTGGCCTTGAGCAGCTCGCCGATGTCCTCCCACGGTTCGGGCCCCGGAAGGAGGTAACTCCATTTTGCAACTTCTGTTGCTTATCTTCTGATAGATAGTTTATGAATTTGTTAAGCGCTCGCTTTAATCGAACATAAATGCTACAATTTTGCGGAAATGTATGGGTTGTCTATACAAATAGCTATTACTTAGCCATAATATATATACCCTGGCATGCCCATAATATACTGCAGCATATTTTATTTTATGAACCATAGTGTACTTATTGCAACAATGAAATGGGTAGAGGAGAGAGGCATTTTTAGAAAACAATGATGACGATAAAAGGGAACTTTTGTTTGTTTCCGTCACCAACATGGATAACATTATTAACTTGTTCATAACGCTAGTACACTTCAGTTATAGCGTGATACTTTTAGTGTGTCATAGGTTAACACAATCTTGTAGCATAGTGCCAACTTGCTCGTTGCCATGGCATGTGGCTTTTCAGTTGCTTAATCTTACTAGAAATATCATGAAGACTAGAAAGATCGTGAAGAAAGAAAATTGAAGTTAGAAATTCCATGTGTCCTATTTGGTTGAGAAAGAAAATGATGAGTCCATTCCTGGATATGTGTCAATCGAGTCTTTTATACAAAGGGGTAGAAAATTTTGGTACTATTTTTTTACTTCCCATAATTTATGGCCTTCCAAAAGGACAGTAAACTAATTATGATCCAAGCATTTTGTTGATATACCTAGGGATATGAACTTGCAGGTTAGCAATTGCATTAATACTGAAAAGTGAAAAAGAAATACTGTAATTTTATGTTTTTTAAATATTGAAAATTGCATTTGCAGTAAAACAAAGCTTGTGAAATTAGCACATGATCTTACTGAAGAGTATGCTATTTCATTTCTCGTTTTTAAATGTCTGGTCCACTTCTTGCATATGTTTCAGGATGAACCTTTTGTTCCTTTTACGGATGAGGATGAGGATAGTGTTGATCATGCTCTTGGTGGCCGTAACAGGTTTGGTTCCTTGTCTTCTCTTCATAAACAGTAAACAGTAGAACATTTCTTGAGCAAATATGTCGCTTAATTCGCGGCATCTTTTTTTTTTCCAGACGTGAAAGGCTAGTGGTACATGAATCATCAAATATTGTCATAACAAGAGAGACCTTGCAGTGCTTGAACGAAACGGAGTGGCTAAATGATGAGGTATTTTATTGCTTGTGCTGTTTTCTTCTGTTTGAACTCAAAAGGTGAGCATATGGGATTTGACATGAGCTCCTTGACATTTTCAGGTCATAAATTTGTATCTTGAGCTGCTGAAAGAGAGGGAGCTGAGAGAACCTAACAAGTTTTTGAAATGCCACTTCTTCAATACCTTTTTCTACAAAAAGGTCAGCTTCTGTTTCTATAATTCAGTTTCCCTGATATTTCCTCCGTTTCATATTAGAAGACTTTTTAGCATTGCCCACATTCATATATATGTTAATGAATCTAGACATATCTGTGTGCCTAGATTCAACATCTATATGAATGTGGCAATGCTAGAAAGTCTTATAACCTGAAACGGAGGTAGTACCATTTTGATATTGCTTTACCTTAACATGATTAGTGTAGAGAGAGTTATGAAGGTTTTGCTTGTGCCATGTTTCCAAGGACTAGACAAAAAATTTCTTATTTTGCTGAGTTTGTTTTTGTTTGTTTATTCCTTTTTTATATCTTTACAAGAAAGTTGCACTTGTGCATGCTATTCAACTAGTATGTTTCTATTTCTATATTCATGGTATCAACTGTTTGCACAGCCTTTATTGGCAAAGTTAGTTAGGAACTAATGATGCTGATCAATATTATATTTGAGTTGAGTATTCCACTAATCCTAACTCGTATGATATATGTTCTAACAAAACTCAACAGATACAAACTAACTAGCCATGTATTTTTCCCCTGTGATCAGCTCATTACTGGTGGGTATGATTATAAGTCTGTCAGAAGATGGACAACTAAAAGGAAGTTAGGTTACAGCCTACTTGAATGTGATAAGGTAAAATGCTATTTTCTTTCTCTTTTCAAGCTGAATTCTCCTGGGATTTTACTATTATCTGACTGAACCAGTTATTTCTGTCCAGATCTTTGTTCCTATACACAAGGAAGTGCATTGGTGTTTAGCAGTCATAAACATAAGGGACAAAAAGTTTCAATTTCTGGATTCACTTGGCAGCATGGACATGAAGGCATTGAGAACTTTAGTAAGTAGTATAATCTGACTGTCTGATTAGTTGCTTGGTTTGTGTCTATACATGAGAAAATCTGATGGCTTTTGAAATTCCTTTCTTAATTTCTACTGAAGTGATGGTATGAGTCACGGAAAGACCATGTAAACATAGAACTATAGAAGTTTAGAATTTAATTTTGAGGAAAACATCACAAAATCCAATTGTATTATAATACATTTCTTCATTCTAGAATCCAGGATCTATTCAGTTCACGTTTTACATGCATTTGCTGGAGATTCTTGAACATTGTAGTGCCATGTGATCCTAAATTATTTTTTCCCACTTAACCAGGCAAGGTATCTTGTAGATGAGGTGAAAGATAAGAGTGGCCAACATATTGATGCTCTTTCATGGAAGCAGGAGGGTGTAAAAAACCTTCCTTTGCAAGAGAATGGGTATTTTTCTCAATTTTTTTTTCTAGTATGTGTATCAGTCTTGCTAACCAACATTATACAATAGTAGAACTTGTTTTTTCCTTTAAAGGAGGTGCAATTCTAAGAACATTATATAGTTCACCACAGGCATATCGCATTACTATGCCTTCGAAAATTTGCGTAATGTACTCATTACTTGGTTGCCTTCCATTTAGGTGGGATTGTGGCATGTTCATGCTCAAATACATAGATTTCTACAGCAGAGATATGGGCCTTACTTTTGGACAGGTACCAAATTGGATCTTGCGCTTCCTGCCAATTTATATGCTCTACTTGGAAGAAGTTAAAATGGAATTTATGATTTTTTTTTCAAGTGAAATTAACTGGTTTTGAAATTGGTTGTCTTTCATAGAAACATATGCATTACTTTCGGAAGAGGACTGCCAAGGAAATTTTGAATTTGAGGGCTGAATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA001682

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA001682&oldid=39406"