BGIOSGA001684

From RiceWiki
Revision as of 10:24, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA001684| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA001684, complete gene.| tag = OsI_018...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA001684

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA001684, complete gene.

LocusTag

OsI_01858

Ensembl Transcript ID

BGIOSGA001684-TA

Ensembl Protein ID

BGIOSGA001684-PA

Length

1517

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:15870998..15872514

Sequence Coding Region

15871770..15872514,15870998..15871701

Genome Context

<gbrowseImage1> name=IndicaChromosome01:15870998..15872514 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:15870998..15872514 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGTGATTGTTTCTACTATTATGGGCGAATTTGCCAACAGAACCATATCTTTCCTTATCCAAAAATACTCAGAAAGAGTGACAACAACAACAGAAGAGGAGAGATTGGACAACCTGCAACGGCTACTACTACGAGTCTGTATCATTATTGAAGATGCAGAAGAGCGCCACGTCACGAACCAAGCGATGCTGCATCAGCTCAACATACTGAGAAAGGAAATGTACAGAGGCTACTATACGTTGGACACCTTCAGGTTCCGAGCCCATGACGTTAAGAAGGAGAAAGATCATGAAGTGAGTTACTCCTTTGTCTTGTCTAAATTCAATCATGCCAAACGTGTTTGCTTCTGCAGTGACAGTGATGAGAGGGTGAAGGAGCTCGAGAAGGTTGTTGTAAGCCTAGAAACTATCATTGGAGATGCCAATGAGTTCATAAAATTATCAAGCACATACCCTCGTCTCTCCCGTCAGCCGTACAGCATGTACTTGCTTCTGGACAAGTGCATGTTTGGCCGGCAGATGGAGATGGAACGTGTGATCAACTTCCTGTTGCAGGAAGAGATCACCTATGGCGCTGACCATCTTGGCGTCCTGCCCATCATCGGCCCAGGAAAAGTGGGCAAGAGCACCCTTGTCGAGCATGCCTGCATCGACGAGCGAGTGCGCAGCCACTTCTCGCAAATTGTGTTCTTCAGCAAAGATGGTCTTACAGATGGAAACATAGTGACTCTCAAAGATTGTGACGGTGAGATCGACCAGGTTTTATGGGAAAGATTCTACTCAGCTTCAAAGAGTTGCTTCGCATATGGAAGTAAGATCATAATCACAAGCCGATCTGACAAGATTGCGAGCTTCGGAACCACTCAGCCACTTAAGTTACAGTTCCTGACTCATGAGGCATTCTGGTACTTATTCAGAGTGCGTGCATTTGGAAGCTCAGATCCAGCAGAGAACCCCAAGCTGGCATCATTGGCGATGGACATGGCCAGCGAGGTGAGTGGATGTTTCACAAGTGTAAACATGTTCAATGGCCCACTGAGATCGAACACCACCACTCGTTTTTGGAGCTTTGTTCTTGCAACCATCCGAGGATTCAAGCAGAAGAACCTAAGTATTTATAGCAGCACAAATCCACTTGATCCCTGGGCAGTGGTGGCGCCACTGTATATCCCTAGGGCAAATAAAAATTTGGATCCAGTTGCAATTCTCAATAATTATCAGAGAAATTGTAACGATCCTGATTACGGCCTCAGTCCTAGTGCAGCTTCGCAGATAATGGTGCAAGATATCATGTTTGGAACCGCTACGCCTCCGGGGAAATTTGAGGTTCTTGCATGGAGATCTCACATACCACCATACTACAGTTGTGTATTTGACTGTGAGATAAAGAGGCCACCAACGTGTATGGTCTCTAGGAAGAAGAAGACCAAGAAGATTGGCATCTGA</cdnaseq>

Protein Sequence

<aaseq>MEVIVSTIMGEFANRTISFLIQKYSERVTTTTEEERLDNLQRLLLRVCIIIEDAEERHVTNQAMLHQLNILRKEMYRGYYTLDTFRFRAHDVKKEKDHEVSYSFVLSKFNHAKRVCFCSDSDERVKELEKVVVSLETIIGDANEFIKLSSTYPRLSRQPYSMYLLLDKCMFGRQMEMERVINFLLQEEITYGADHLGVLPIIGPGKVGKSTLVEHACIDERVRSHFSQIVFFSKDGLTDGNIVTLKDCDGEIDQVLWERFYSASKSCFAYGSKIIITSRSDKIASFGTTQPLKLQFLTHEAFWYLFRVRAFGSSDPAENPKLASLAMDMASEVSGCFTSVNMFNGPLRSNTTTRFWSFVLATIRGFKQKNLSIYSSTNPLDPWAVVAPLYIPRANKNLDPVAILNNYQRNCNDPDYGLSPSAASQIMVQDIMFGTATPPGKFEVLAWRSHIPPYYSCVFDCEIKRPPTCMVSRKKKTKKIGI</aaseq>

Gene Sequence

<dnaseqindica>1..745#814..1517#ATGGAGGTGATTGTTTCTACTATTATGGGCGAATTTGCCAACAGAACCATATCTTTCCTTATCCAAAAATACTCAGAAAGAGTGACAACAACAACAGAAGAGGAGAGATTGGACAACCTGCAACGGCTACTACTACGAGTCTGTATCATTATTGAAGATGCAGAAGAGCGCCACGTCACGAACCAAGCGATGCTGCATCAGCTCAACATACTGAGAAAGGAAATGTACAGAGGCTACTATACGTTGGACACCTTCAGGTTCCGAGCCCATGACGTTAAGAAGGAGAAAGATCATGAAGTGAGTTACTCCTTTGTCTTGTCTAAATTCAATCATGCCAAACGTGTTTGCTTCTGCAGTGACAGTGATGAGAGGGTGAAGGAGCTCGAGAAGGTTGTTGTAAGCCTAGAAACTATCATTGGAGATGCCAATGAGTTCATAAAATTATCAAGCACATACCCTCGTCTCTCCCGTCAGCCGTACAGCATGTACTTGCTTCTGGACAAGTGCATGTTTGGCCGGCAGATGGAGATGGAACGTGTGATCAACTTCCTGTTGCAGGAAGAGATCACCTATGGCGCTGACCATCTTGGCGTCCTGCCCATCATCGGCCCAGGAAAAGTGGGCAAGAGCACCCTTGTCGAGCATGCCTGCATCGACGAGCGAGTGCGCAGCCACTTCTCGCAAATTGTGTTCTTCAGCAAAGATGGTCTTACAGATGGAAACATAGTGACTCTCAAAGATTGTGGTACAACCAAGCACCAGACCGATGATGCCCTGGGTGAATCAGAAAGGAGTCTGCTTATTGTTGACTAGACGGTGAGATCGACCAGGTTTTATGGGAAAGATTCTACTCAGCTTCAAAGAGTTGCTTCGCATATGGAAGTAAGATCATAATCACAAGCCGATCTGACAAGATTGCGAGCTTCGGAACCACTCAGCCACTTAAGTTACAGTTCCTGACTCATGAGGCATTCTGGTACTTATTCAGAGTGCGTGCATTTGGAAGCTCAGATCCAGCAGAGAACCCCAAGCTGGCATCATTGGCGATGGACATGGCCAGCGAGGTGAGTGGATGTTTCACAAGTGTAAACATGTTCAATGGCCCACTGAGATCGAACACCACCACTCGTTTTTGGAGCTTTGTTCTTGCAACCATCCGAGGATTCAAGCAGAAGAACCTAAGTATTTATAGCAGCACAAATCCACTTGATCCCTGGGCAGTGGTGGCGCCACTGTATATCCCTAGGGCAAATAAAAATTTGGATCCAGTTGCAATTCTCAATAATTATCAGAGAAATTGTAACGATCCTGATTACGGCCTCAGTCCTAGTGCAGCTTCGCAGATAATGGTGCAAGATATCATGTTTGGAACCGCTACGCCTCCGGGGAAATTTGAGGTTCTTGCATGGAGATCTCACATACCACCATACTACAGTTGTGTATTTGACTGTGAGATAAAGAGGCCACCAACGTGTATGGTCTCTAGGAAGAAGAAGACCAAGAAGATTGGCATCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA001684