BGIOSGA001685

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Revision as of 10:24, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA001685| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA001685, complete gene.| tag = B1157F0...")
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Gene Name

BGIOSGA001685

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA001685, complete gene.

LocusTag

B1157F09.8

Ensembl Transcript ID

BGIOSGA001685-TA

Ensembl Protein ID

BGIOSGA001685-PA

Length

4729

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:15841070..15845798

Sequence Coding Region

15845209..15845798,15842312..15844016,15842091..15842223,15841907..15842004,15841742..15841807
,15841180..15841269,15841070..15841132

Genome Context

<gbrowseImage1> name=IndicaChromosome01:15841070..15845798 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:15841070..15845798 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACGACTTCGTCCTCGTCGACGACTTCGGCCCGTTCAAGCCGCCGGCCGCCTCCGCCTCCACCACCTCCTTCTCCGCCTCTCACTACGACGACATGTTCGACTCCTACTTCAACCGCTCGGCGGAGCCCGCCGAGCCGTCCCCCTCGTCCTCCGCGCCGTCGCCGCCTCCGCCCGTGTTCGACAAGCCGGTGTTCGACGACGCCGACGCCGACGCCGCCGATCCCTTCGACGCGATTCCCTTGTTCGGAGATGGGGGCGGCGGTGGCGGCGAAGGGGAGGACTTCCTCGATAGCCTCGGGAAGGGCGCGAAGAAGCCAGATGTGAGCGAGCCGGAGGTGGTGGGGTTTGACGACGATTTAATCCCAGCTCTTGGGAACACCAAATCGAAGACGCCCGTGGGTGAGGAGGTGGAGCAGGAGGCGGAAGCGGTGGGGTTCGTCGACGACGTAATCCCCGAGTGGTTCGGTGGGAGCACGAGCACGACGCCGATAAAGCCGACACCGCAGGCGGGGCCCAAGGCGACGGGGTTTGAAGACGATGTGATTCCCGGGTTTGGTGAAAGCACAAGCCATCACGATTCACCATGGGAGGAGCCTAGAACTAGACCGGAAAACGAATCAATTTCATCCAGCAAAACGAGTGTGAGCATGCCAGGAGATGCTTTTGTTACTCTAGGTGCTACATCCAACTTGGGAAATTCAAATTTTGGGTTGTTTACTGATCATTTGGATTACATGGGCAAGTCAGAGAGCAAAAATATGGACCCCTGTTCTACTGCCAATGGGATGTTTGATAGTTCTAATATTTTTGTTGGGGTTCCAAAACCAATGTCCTCGTCTTCATTTGCATCTGAGAAAGAGAGTGTTTTTGGTGATAGTAAATCCTTGGATGGCATTTACAGCATAAGCCATTCCATTAAAATGCCTAAGGAGAAACCAGTCCAGCAAGCTTCAGCTGAAACAATGAGCAGTATATTGCCTGAGATGCATATCCATGAAGCTCCTGGAACCACTGGTTTCAATAATTCAGATCCACTTTCTACAAGTATGCAGGACCAGTTGCCAGAGGAGAATCAATGTTCCAAAATGTCCGACGACGTGTGGTTGACTGTTTCAGATGTTGTTTTAGTGACACAGCCTACGAGTGCTCCACCTCCTTCACGGCCTCCCCCTACGCTTGCCTCCAAGAAAGGACCAACGGAATCCAACACTAGTAATGCATATCCACATGATCATAATCAAGGTTACAATCCTTTTATAAGTTCAACAAATACTTCTAAAACACCCAAAATTGATGAATTAGAAGATTTTGTCATGGCAAAGCCTTCTAGCTTGGCTAATGGTTGTCTGCAAGATCTAAATCATAATGGAATTGGGATTGGACAAGATTCATCTACATCTGCTGCAGGTTTCATGGATTGGGCTGAGCTAAAACACTCTAAAGGGGTGAACCAAGGGAACTTTGATTCTTTGTTCGCTAGCAGTCAGTACCAAGAAAAAGAGAAAGCAGTGCTCTATGCTTCTGGAATGGAAAGCAGAGATGAGGAAGAACTATTAGAGTATGAGAAAAAACAAAGAGAAAAGGAAGAGGAACAGAGAAAACTAGAAAGGGACAGGGAGGAAGAGCTTGAGAGGGAAAGAGAAATGATGAGAAGAAGGGAACATGAGGAGCGGAAGAGGCGTGAAAAAGAGAGAGAGGCGAGACACATTGTGGAGAAGGCCATGCGAGAGGCACGTGAAAGGGCAGCTGCAGAGGCACGCATGCAAGCTGAGAGGGAGGCTCGTCAAAGAGCAGAGCGAGCTGCTGTACAGAAAGCAGCAGCAGAAGCACGGGAGAGAGCAGCAGCAGAAGCACGGGAGAGAGCTGCAAAGGCGGCTGCAGAAGCGAAGGAAAGGGTGGCTGAGGAGGCTAGGGAAAGGGCTGCTAAAGCTGCTGCAGAAGCCAGGGAAAGGGCTGCAGCAGAAGCAAGGGAAAGAGTAGCCAAAGCTGCTGCAGAAGCCAGGGAACGGGCAGCTACAGAAGCTAGGGAAAAGGCAGCAGCAGAAGCTCGGGCTAAAGCTGAGCGAGCTGCTGTTGATAAAGTTGCAGCAGAAGCACGAAGAAGGGCTGAAAGAGCAGCAGTTGAGAGGGCTGCTGCAGAAGCTCGACAAAGGGCTGCTAATGAAGCTAGAAAAAGGGCTGAAGCTCGAGCAAGAGAAAGTCAGCAGAAAACAGCTCAACCTGATCTTGACTCATTCTTTGGTATGCCTTCTAGATCAAGCAGTGTACCGAGGTCACAGACTGCAACAACGAATCCTTTTGATGTCCAACCTCAAGGTGGTTCAGATTTTGGTTCTATAAGGAGGACTTCTTCTGGTTCAGCTTCTCCCTTTGCACAACCTCCATCTACTAATCTTATGGATGACCTCTCTTCTATATTTGGAGCACCTTCATCATCTGCTGTGTTTCAAGAAGTGGATGGAGAGAGTGAAGAGAGAAGGAAGGCAAGATTGGAGCGTCACCAGAGGACAATGGAGCGTGCGGCAAAAGCTCTTGCTGAGAAAAATGAGCGTGATTTGCAAGTTCAGTGGGAGCAGGAAGAGAGACATAGAATTGGTGAAACACTTGATTTTGAGATAAAGAGGTGGGCCGCTGGGAAAGAAGGCAATTTGCGAGCCTTGTTGTCAACGTTGCAATATGCCTTGTTCGGTTCCATGGGATTTAATCCCCAAGTGGAATATATCCAGGGAGGGATTGAGTGA</cdnaseq>

Protein Sequence

<aaseq>MDDFVLVDDFGPFKPPAASASTTSFSASHYDDMFDSYFNRSAEPAEPSPSSSAPSPPPPVFDKPVFDDADADAADPFDAIPLFGDGGGGGGEGEDFLDSLGKGAKKPDVSEPEVVGFDDDLIPALGNTKSKTPVGEEVEQEAEAVGFVDDVIPEWFGGSTSTTPIKPTPQAGPKATGFEDDVIPGFGESTSHHDSPWEEPRTRPENESISSSKTSVSMPGDAFVTLGATSNLGNSNFGLFTDHLDYMGKSESKNMDPCSTANGMFDSSNIFVGVPKPMSSSSFASEKESVFGDSKSLDGIYSISHSIKMPKEKPVQQASAETMSSILPEMHIHEAPGTTGFNNSDPLSTSMQDQLPEENQCSKMSDDVWLTVSDVVLVTQPTSAPPPSRPPPTLASKKGPTESNTSNAYPHDHNQGYNPFISSTNTSKTPKIDELEDFVMAKPSSLANGCLQDLNHNGIGIGQDSSTSAAGFMDWAELKHSKGVNQGNFDSLFASSQYQEKEKAVLYASGMESRDEEELLEYEKKQREKEEEQRKLERDREEELEREREMMRRREHEERKRREKEREARHIVEKAMREARERAAAEARMQAEREARQRAERAAVQKAAAEARERAAAEARERAAKAAAEAKERVAEEARERAAKAAAEARERAAAEARERVAKAAAEARERAATEAREKAAAEARAKAERAAVDKVAAEARRRAERAAVERAAAEARQRAANEARKRAEARARESQQKTAQPDLDSFFGMPSRSSSVPRSQTATTNPFDVQPQGGSDFGSIRRTSSGSASPFAQPPSTNLMDDLSSIFGAPSSSAVFQEVDGESEERRKARLERHQRTMERAAKALAEKNERDLQVQWEQEERHRIGETLDFEIKRWAAGKEGNLRALLSTLQYALFGSMGFNPQVEYIQGGIE</aaseq>

Gene Sequence

<dnaseqindica>1..590#1783..3487#3576..3708#3795..3892#3992..4057#4530..4619#4667..4729#ATGGACGACTTCGTCCTCGTCGACGACTTCGGCCCGTTCAAGCCGCCGGCCGCCTCCGCCTCCACCACCTCCTTCTCCGCCTCTCACTACGACGACATGTTCGACTCCTACTTCAACCGCTCGGCGGAGCCCGCCGAGCCGTCCCCCTCGTCCTCCGCGCCGTCGCCGCCTCCGCCCGTGTTCGACAAGCCGGTGTTCGACGACGCCGACGCCGACGCCGCCGATCCCTTCGACGCGATTCCCTTGTTCGGAGATGGGGGCGGCGGTGGCGGCGAAGGGGAGGACTTCCTCGATAGCCTCGGGAAGGGCGCGAAGAAGCCAGATGTGAGCGAGCCGGAGGTGGTGGGGTTTGACGACGATTTAATCCCAGCTCTTGGGAACACCAAATCGAAGACGCCCGTGGGTGAGGAGGTGGAGCAGGAGGCGGAAGCGGTGGGGTTCGTCGACGACGTAATCCCCGAGTGGTTCGGTGGGAGCACGAGCACGACGCCGATAAAGCCGACACCGCAGGCGGGGCCCAAGGCGACGGGGTTTGAAGACGATGTGATTCCCGGGTTTGGTGAAAGCACAAGCCATCACGATTCACCATGGTATGAGAAGGCCTTTGATCCTGGAATTTCCAGTTTTGCTTCTGTTACTACTTCATTTACACAGTTTCTGTAGCTTAATCCATTATTGTGAAGTGCGGTTGACCAAGTAAATTTCATTTATATAAGGATTAAGGATAAAACTATAGCCCATTATGGATGCTAAAATTCCCTGAGGTTGAAGCCTGGTCCATGCATTTTTAGGTTTGGTTCGTTGGAGCTTGCATATTATGACGCGGTGTAATAGCATTTTATAGATTTCAGGACCAATTGGAGCTGGTGTTGTTGCTAGTTTTAACTATGTGAGATAAGTGGGTAAAGTAGTGCAAAGCTATATGGACTGGATTTCACAGTACCGCTGCTATCTGAATGACTTCACTGATTAAGGTGTGCAAGAAAGGGGCAACTTCTTATTAAATCACTGCCTCTGGTTGAATGATAAATCCTTGCTAGTTATTGAAAATGATTATATTACATAGTGGGTTTTGAGTTCTATGTTTGAAACATGTATATACATTACATGTTGCATGTTGGGGGGGGGGGTTGTGAATATCCTAATAAAAAAGTGTGTTATTTTCTGCATGGTTTTCTTTATACCGGTTATCTTATACTACAACCTGCAGGCATCTGATGGGTGCATACTTTCTGTCATAGGAATTATGTCTTGATGTTTCTCTATGTTTTTTTAACCCATTTAAGAACTTTTAGGATTAATTCCTTTAAATGCTCACCTTTTTTAGAAGCACCGAGCATTGTTATTTCTGATCCCTAGGATCAACTTGAACTTGGGATACTCAACCAAAATCAGCACGAATTGTAGGCAACTTGCTGTATTTTGTCATTACTGTGTATTTTTTTTTGGTCAATTGGGGGGCTTTTTTTTTTTTACCTAGGTAGGTGATAAAACACACAGTTTTGTTTGTTTATTATAATGTCAAATCTTCAAAATGATGCCTTCTAGGTCACATCTATTGGAAGATATTCCAATGCCTGCAATTTTGTGCATAGTTGATTAATGTGTTCAATTGACACATGTACCATTTGCTAGTTCAGTGTTTAATTATGGACAGTATAGACGGTCAATTGTTGGTAATTGGAGGTTTTAAAATTTTCGATTCAAAATAGTTGTTTATCTGCTAACTGCATAAGCTATTCTTCTCTTGATTGTTGTTCATTTGCGAACAAATCTGTACAGGGAGGAGCCTAGAACTAGACCGGAAAACGAATCAATTTCATCCAGCAAAACGAGTGTGAGCATGCCAGGAGATGCTTTTGTTACTCTAGGTGCTACATCCAACTTGGGAAATTCAAATTTTGGGTTGTTTACTGATCATTTGGATTACATGGGCAAGTCAGAGAGCAAAAATATGGACCCCTGTTCTACTGCCAATGGGATGTTTGATAGTTCTAATATTTTTGTTGGGGTTCCAAAACCAATGTCCTCGTCTTCATTTGCATCTGAGAAAGAGAGTGTTTTTGGTGATAGTAAATCCTTGGATGGCATTTACAGCATAAGCCATTCCATTAAAATGCCTAAGGAGAAACCAGTCCAGCAAGCTTCAGCTGAAACAATGAGCAGTATATTGCCTGAGATGCATATCCATGAAGCTCCTGGAACCACTGGTTTCAATAATTCAGATCCACTTTCTACAAGTATGCAGGACCAGTTGCCAGAGGAGAATCAATGTTCCAAAATGTCCGACGACGTGTGGTTGACTGTTTCAGATGTTGTTTTAGTGACACAGCCTACGAGTGCTCCACCTCCTTCACGGCCTCCCCCTACGCTTGCCTCCAAGAAAGGACCAACGGAATCCAACACTAGTAATGCATATCCACATGATCATAATCAAGGTTACAATCCTTTTATAAGTTCAACAAATACTTCTAAAACACCCAAAATTGATGAATTAGAAGATTTTGTCATGGCAAAGCCTTCTAGCTTGGCTAATGGTTGTCTGCAAGATCTAAATCATAATGGAATTGGGATTGGACAAGATTCATCTACATCTGCTGCAGGTTTCATGGATTGGGCTGAGCTAAAACACTCTAAAGGGGTGAACCAAGGGAACTTTGATTCTTTGTTCGCTAGCAGTCAGTACCAAGAAAAAGAGAAAGCAGTGCTCTATGCTTCTGGAATGGAAAGCAGAGATGAGGAAGAACTATTAGAGTATGAGAAAAAACAAAGAGAAAAGGAAGAGGAACAGAGAAAACTAGAAAGGGACAGGGAGGAAGAGCTTGAGAGGGAAAGAGAAATGATGAGAAGAAGGGAACATGAGGAGCGGAAGAGGCGTGAAAAAGAGAGAGAGGCGAGACACATTGTGGAGAAGGCCATGCGAGAGGCACGTGAAAGGGCAGCTGCAGAGGCACGCATGCAAGCTGAGAGGGAGGCTCGTCAAAGAGCAGAGCGAGCTGCTGTACAGAAAGCAGCAGCAGAAGCACGGGAGAGAGCAGCAGCAGAAGCACGGGAGAGAGCTGCAAAGGCGGCTGCAGAAGCGAAGGAAAGGGTGGCTGAGGAGGCTAGGGAAAGGGCTGCTAAAGCTGCTGCAGAAGCCAGGGAAAGGGCTGCAGCAGAAGCAAGGGAAAGAGTAGCCAAAGCTGCTGCAGAAGCCAGGGAACGGGCAGCTACAGAAGCTAGGGAAAAGGCAGCAGCAGAAGCTCGGGCTAAAGCTGAGCGAGCTGCTGTTGATAAAGTTGCAGCAGAAGCACGAAGAAGGGCTGAAAGAGCAGCAGTTGAGAGGGCTGCTGCAGAAGCTCGACAAAGGGCTGCTAATGAAGCTAGAAAAAGGGCTGAAGCTCGAGCAAGAGAAAGTCAGCAGAAAACAGCTCAACCTGATCTTGACTCATTCTTTGGTATGCCTTCTAGATCAAGCAGTGTACCGAGGTCACAGACTGCAACAACGGTAAGCAGCTATGCAAATTGTTTTGGCACAAAATTGGGGGGGGGGGATCCTAATTTATGTTTGTCTTATCACCTTTTCATCTTTTCAGAATCCTTTTGATGTCCAACCTCAAGGTGGTTCAGATTTTGGTTCTATAAGGAGGACTTCTTCTGGTTCAGCTTCTCCCTTTGCACAACCTCCATCTACTAATCTTATGGATGACCTCTCTTCTATATTTGGAGGTATGATTATAGTAGATTTTGAACAGTGCCTTGTTTTGAACATCTCAAGTTACCACTGATCATTTGTTGAATGTTCTTCATAATAGCACCTTCATCATCTGCTGTGTTTCAAGAAGTGGATGGAGAGAGTGAAGAGAGAAGGAAGGCAAGATTGGAGCGTCACCAGAGGACAATGGAGCGTGCGGTATGCTGACATATAATTTATTAGCTCATAATTTCTGAAAGCAGCATTTATTGAAGATAGTTCTGCTGCATCATATTGCCATCAATATGACATTTGCAGGCAAAAGCTCTTGCTGAGAAAAATGAGCGTGATTTGCAAGTTCAGTGGGAGCAGGAAGAGAGACATGTAAGTCTATATGATTTTAGCCATACTGTTAGAACCCAGTGTGACTGGGCAATATTTGAATTTCAGCTTATCAGCCGCAGCCAAAATTTAAATTTTAGAACTTAATTTTAGAGTTGATTTTGTTGTTTTTTCCAAGCGTAGTTTATTTTTCAACATTGGCTTTTAAGTCGCTAAGAACACATATATAACGTTCTACCCATAAATTAAGTTCTTTGTCACTAATAAGCGTTACGGCTTATAATCGGTTGTAGACGAAACGATGGGACTGTTAATGGCTATTTCTTTTGTCAGCACAAAAGAAACACCAATTTTAGTTTAGCAGTGAAATGCCAATTTTAGTTTCTGGCAATCACTATCAATCGTAGTTTAGCTGTGAAATGGCAATTTCTTTTGTGTTCTTCTTTCCTTCTTTTTTTTTTCCTTTTCCAATTGCGCATCTTCATTTTATCAGTGATGTGGTCTTTCTTTTCAGAGAATTGGTGAAACACTTGATTTTGAGATAAAGAGGTGGGCCGCTGGGAAAGAAGGCAATTTGCGAGCCTTGTTGTCAACGTTGCAATATGTAAGTATGCTGTTTCCAGTATCTGTATCCTCCTTTGGTTCTTTTAGGCCTTGTTCGGTTCCATGGGATTTAATCCCCAAGTGGAATATATCCAGGGAGGGATTGAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA001685