BGIOSGA001776

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Revision as of 10:26, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA001776| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA001776, complete gene.| tag = P0426D0...")
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Gene Name

BGIOSGA001776

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA001776, complete gene.

LocusTag

P0426D06.40

Ensembl Transcript ID

BGIOSGA001776-TA

Ensembl Protein ID

BGIOSGA001776-PA

Length

5817

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:13398842..13404658

Sequence Coding Region

13404618..13404658,13403949..13404312,13403800..13403848,13403589..13403672,13403380..13403483
,13402029..13402115,13401899..13401952,13401622..13401717,13401007..13401134
,13400299..13400425,13400130..13400189,13399925..13400032,13399197..13399297
,13399058..13399109,13398842..13398940

Genome Context

<gbrowseImage1> name=IndicaChromosome01:13398842..13404658 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:13398842..13404658 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTCGTCGGCGTCCACCCTCGAGATCGAGGCCCGCGACGTGGTGAAGATAGTGCTGCAGTTCTGCAAGGAGAACTCGCTGCAGCAGACGTTCCAGACGCTGCAGAACGAGTGCCAGGTCTCGCTCAACACCGTCGACAGCATCGACACCTTCATCGCCGACATCAATGCCGGGCGCTGGGACGCTGTGCTGCCCCAGGTTGCGCAGCTCAAGCTGCCGCGCAAGAAGCTCGAGGACCTGTACGAGCAGATTGTGCTCGAGATGGCTGAGCTCCGTGAGCTGGACACGGCGCGCGCCATCCTCCGCCAGACCCAGGTCATGGGCGTCATGAAGCAGGAGCAGCCCGAGCGGTACCTCAGGCTTGAGCATCTCCTTGTCCGGACATACTTTGACCCCAATGAGGCCTACCAAGAATCCACCAAGGAGAAACGACGTGCACAGATTTCCCAAGCTATTGCTTCTGAAGTTTCAGTAGTTCCACCTTCTCGGCTAATGGCACTGATTGGTCAGGCTTTGAAATGGCAACAGCACCAAGGATTGTTACCACCTGGCACACAGTTTGATTTATTTAGAGGAACTGCTGCAATGAAGCAAGATGAAGAGGAAACATATCCTACTACTTTATCACATCAAACAAAGTTCGGGAAGAAAACTCACCCTGAATGTGCTCGATTTTCACCTGATGGCCAGTACCTTGTATCATGCTCAGTGGATGGAATCATTGAGGTTTGGGATTATATCAGCGGGAAGCTTAAAAAGGATCTTCAATATCAAGCTGACGAAAGCTTCATGATGCACGATGATGCGGTGCTTTCTGTTGATTTCAGTAGAGATTCTGAGATGCTGGCATCTGGATCACAGGATGGAAAGATTAAGGTTTGGCGTATACGAACTGGCCAGTGTTTGCGTCGCCTCGAGCGTGCACATGCAAAAGGTGTTACAAGTGTTACATTCTCACGTGATGGAACTCAGATATTGAGTTCATCCTTTGACACTACTGCAAGAGTACATGGCCTCAAGTCCGGAAAGATGCTGAAGGAATTCCGAGGCCATAACTCATATGTGAATTGTGCCATCTTTTCTACAGATGGTAGCCGTGTTATTACAGCTTCCAGTGATTGTACTGTTAAGGTGTGGGATACGAAAACAACAGATTGTTTGCAAACATTCAAGCCACCACCTCCTTTGAGGGGAGGAGATGCAACTGTTAACTCTGTCCATTTATCTCCAAAGAATAGTGATCACATTATTGTGTGCAATAAGACATCTTCAATATACATAATGACTCTACAAGGACAGGTTGTAAAAAGTTTTTCATCTGGTAAACGGGAAGGGGGAGATTTCCTTGCAGCTTCCGTTTCACCAAAAGGAGAATGGATATATTGTGTTGGTGAAGACATGAACATGTATTGCTTTAGCTACCAGTCCGGTAAACTGGAGCATCTAATGAAGGTCCACGACAAGGATGTGATAGGCATCACTCACCACCCTCATAGGAACTTGATTGCTACTTATGCTGAAGATTGCACGATGAAAACATGGAAGCCTTGA</cdnaseq>

Protein Sequence

<aaseq>MASSASTLEIEARDVVKIVLQFCKENSLQQTFQTLQNECQVSLNTVDSIDTFIADINAGRWDAVLPQVAQLKLPRKKLEDLYEQIVLEMAELRELDTARAILRQTQVMGVMKQEQPERYLRLEHLLVRTYFDPNEAYQESTKEKRRAQISQAIASEVSVVPPSRLMALIGQALKWQQHQGLLPPGTQFDLFRGTAAMKQDEEETYPTTLSHQTKFGKKTHPECARFSPDGQYLVSCSVDGIIEVWDYISGKLKKDLQYQADESFMMHDDAVLSVDFSRDSEMLASGSQDGKIKVWRIRTGQCLRRLERAHAKGVTSVTFSRDGTQILSSSFDTTARVHGLKSGKMLKEFRGHNSYVNCAIFSTDGSRVITASSDCTVKVWDTKTTDCLQTFKPPPPLRGGDATVNSVHLSPKNSDHIIVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFLAASVSPKGEWIYCVGEDMNMYCFSYQSGKLEHLMKVHDKDVIGITHHPHRNLIATYAEDCTMKTWKP</aaseq>

Gene Sequence

<dnaseqindica>1..41#347..710#811..859#987..1070#1176..1279#2544..2630#2707..2760#2942..3037#3525..3652#4234..4360#4470..4529#4627..4734#5362..5462#5550..5601#5719..5817#ATGGCGTCGTCGGCGTCCACCCTCGAGATCGAGGCCCGCGAGTACGTATTCACTCCCCCCTCCTCTCTCCACCTCTGCTAGTCCACAGCTGAGAACCTTGCGGCGACGGAAGAACCAGCCCTGCAATCCCTAAACCCTACGTTCTGCTCCCTCGAATCCCTACAAGTTTAGTCCATGGATTGAAGGGGAATCGACGAGCGAATTTCATATGCTGTTTCTTGGATCTCTCTGTGTCTCTCGCTCTCTAAGAACCCCCCCTCCCATTGGGTAGTGCTATAGCTTAGGAAATTATTACGCAAGGTTGCTAGGTTTGATAGTGTTTCTTGCGTGATGTCCATGGATGCAGCGTGGTGAAGATAGTGCTGCAGTTCTGCAAGGAGAACTCGCTGCAGCAGACGTTCCAGACGCTGCAGAACGAGTGCCAGGTCTCGCTCAACACCGTCGACAGCATCGACACCTTCATCGCCGACATCAATGCCGGGCGCTGGGACGCTGTGCTGCCCCAGGTTGCGCAGCTCAAGCTGCCGCGCAAGAAGCTCGAGGACCTGTACGAGCAGATTGTGCTCGAGATGGCTGAGCTCCGTGAGCTGGACACGGCGCGCGCCATCCTCCGCCAGACCCAGGTCATGGGCGTCATGAAGCAGGAGCAGCCCGAGCGGTACCTCAGGCTTGAGCATCTCCTTGTCCGGACATACTTTGACCCCAATGAGGTTGGTAACTTGCTCTCCATGTATATAGTTTTTTGTAGCGTTCTTTTTCTTGTTTTAGCTATCTAAATTGTGAATTTCTGGTATGCCACTCCATCGCTAGGCCTACCAAGAATCCACCAAGGAGAAACGACGTGCACAGATTTCCCAAGGTGAGCTTGCTGATCATTTTTCTTCTTCCTTACTAAAAGGTTCTCTTAACTCCATATAATACAGGAGCTGGAGCTATTCTTATTTCTAATCCTAATAATAGTTGTCCCTCTGCCATGCCAATTTCAGCTATTGCTTCTGAAGTTTCAGTAGTTCCACCTTCTCGGCTAATGGCACTGATTGGTCAGGCTTTGAAATGGCAACAGCACCAAGGTACTTTCCTGGTTGCACGTTATTAACTTATGATACTATACTATAATGATCTCAGCACGACTAGTATGAACTCATCTTGAGGTCCTTCCCCCACTTTTGTCACAGGATTGTTACCACCTGGCACACAGTTTGATTTATTTAGAGGAACTGCTGCAATGAAGCAAGATGAAGAGGAAACATATCCTACTACTTTATCACATCAAACAAAGGTGATTCTTTTGCTGTAGTCTCTTTATTACATTGGCACTTTTATTTATACCAAGGAACTTAATTAAGTTAAATTTTCTGATTAAATTTTAAAATCAATGAGCTCAAAAGTCTAAAAGAACTGATTTCTGACATGATTGGATAATGGAGGAATTCTGACAAATATTTAATTACGTTAGCTTAATTAGCTAGCTTTAACATATGCTGATACCTATCTTTTGAACTAAGGTTCTGCAATTAACCAGGGTAAGAATGCTAAAGATCACTGAACGTGTGCTATTACTCTCTGCTAGTTACTTGTTAGAATTGATGAGAGACAAACCTGTTCTAAGATGTAGCTCAGGTGTTCTGTCATGCATTCTTAATGAGCATGAGTTTGTCAAGAGAATATATTGTATATGATACTCTGCTTCTCCATTGCGGCATTGCCACTAACTTACCTTGCACGGCTGATGCAATCTTGGGTTTCCGCATATAGGTCCCCTGTGGCTGGTTCTGGTACCAGATGTTGTAGATCTTAGTCGGGAGATTTTGTAAAGCCGGGAGCTTTTGAGAAGCGAGTTAGCTCTCACACTTGACTGGTCAGCCATTATAGCCACCTAGTGTTAAGGTAGGCCTGGTTGAGATATAGGGAGAAAGTGACATACTAGAGCTTTTGGTTAACTCTTTGCTTGACCTGTGAGCTAAATGATGGTATCATTACTAAGAACCTATATCCAATATTAAAGAATCAGTTTATTTGATACTCAAATTGGATCTTATCCGTAACACAACTAATCCAGATTTTTTTTTGCTGCATCATGAACAATAATATTCTTCTTTGTTTTGTTTATATTATGACTTTATAAGAAGAAAGCAGAGTATTATGTACATGATGGCGTGAAGTGCACCTCAAAAAAGCTAAACAGGACAGATAGAAAGGCATTGGGGGGTTACTAGCAGACCCAAGAAAAAACTAAAGGGGATTACTAAGCTTCTTTGCTCCCGCCATTTTCCAGCACCCCTTTTGCTCTGATATTCTGTCAATTAGCCGTTCACTAGAGAGCTCCTCTAGATGGGAGACTCGCTTATTTCATTCGCATCAAATTTACCATTAGACAGATTACCAGCGATCTAGTAATCATGCTTACTGTAACGGCGTGTGCTGCTCATGTGCTACACAGAGTGCACGATGCCTTGTGTGCAGGCCTTGGGGCCATAAGTCAATAACATAATTTTGCATTGTGTACTATCAACTATAACTAGATGTTATTTTCTTTATTGCAGTTCGGGAAGAAAACTCACCCTGAATGTGCTCGATTTTCACCTGATGGCCAGTACCTTGTATCATGCTCAGTGGATGGAATCATTGAGGTAAGTCTCTTTCAAGTCTGTTCTGCAGGTCAGTTCTTTTAATGTAACTTGGCTGAAATTTCACTAAAACTTTCAGGTTTGGGATTATATCAGCGGGAAGCTTAAAAAGGATCTTCAATATCAAGCTGACGTAAGGCCATAGGATTGATGTTTTCTCAAATTGAACAACGAATTAAGTTATTAACACGATTACTGTACTGGTGCATGTGGAAAGCAACATCTTCAAGTTCAGCAGCTTTATGGGGACATGCATATGTTCTTTTTTTTAGTTTAAATATAAATTTCAATAATGTTCAAAAACCACTTTACAGGAAAGCTTCATGATGCACGATGATGCGGTGCTTTCTGTTGATTTCAGTAGAGATTCTGAGATGCTGGCATCTGGATCACAGGATGGAAAGATTAAGGTACCCCCATTATTCTGCATGTATATTTTACGCTTATTTGTTCTTGTCAAGTAGTTAACTTGATATCAGCACTTCTCATCATTGTAATTTTTTTATATGAAGCTATTTATGGATTCAATGTTTAGACTTTAGAGTGGTTACAGCATTCACTATGAATTAAAATGCTTATATTTTATTAAGAGAAAAGCAGGCATAGTTGCAGTTATAGTATGGTCCCCTTTGTAATATTCCTAATATGCAGCTTTTAGAGTGAAAAAAATAATAGGCAGCTTTTACACATGGTTGGCTACTCTCTACTTGAACAAATACATTATTGGTCATATTTGATTACAATCATTCATTCATTTGGTAAAACCATATAAATACATTAATAGAGCGCACAGACCAAAGTTATTTGCTCAAATATCTAATTTCTAATTGTTATGCCAAAAATGTTCTTATTATGAACTAAATTGCCATACTAAACTATTTCTTACTTGATTTTAAGGTTTGGCGTATACGAACTGGCCAGTGTTTGCGTCGCCTCGAGCGTGCACATGCAAAAGGTGTTACAAGTGTTACATTCTCACGTGATGGAACTCAGATATTGAGTTCATCCTTTGACACTACTGCAAGGTTTCTTACAATCATAATCCAACTTGAATTTGTTATCAGAATATCTCTCTACATTTCTGTTTTCAATTTCTAAAAAAAGAGCATTGTTGAAGGCAATATTTTGGTGCTTTGAGCTAGTGTATATTATTTGGGCAAAATTTCATGCTTTTCTCCATTCTAGTATTTGTGGACTTGACATTTGCATCATAGTGCAGCAATTCTGCTTGCAACTGCTCATGTGGTCCTCTTTTTTTTTTTTTTGAGTCTTTGCCTCTTTGGTACAATCCAGTTAATTGACGGAGTAATTTAGGTGCTCTTCATTGATGTATTGTGTTTGCTTGAATATGGGGTTAGTTTGATGGTAAGTCAGAATAAAAGCCTGATTGGAGTCTGCAAACCACGTGTGAATTTTTTTCATCTACCAGACATCTGAGCCATGATCTGTATCTGTGAAATCCTGCCAACTGCTAATTTAAAAATATTGTTTTTCTTCTTATACCTTTGGTTCTGTTGATTTCAGTGTGGTTTTGCATATTCTGAAATTACAGTTTCTGCTATTTTAATCTCTGGAAAGAAATAGGCTTATTCTTTCACTTTTGCAGAGTACATGGCCTCAAGTCCGGAAAGATGCTGAAGGAATTCCGAGGCCATAACTCATATGTGAATTGTGCCATCTTTTCTACAGATGGTAGCCGTGTTATTACAGCTTCCAGTGATTGTACTGTTAAGGTATAGATCTCTTGTATACAATTAATCTTTATGTTTTTTTCTACTTCTGTATATATTATTCTGCATGTTGTATAAATGTCTCATATTCATGTATTATTTCTTGATGTAGGTGTGGGATACGAAAACAACAGATTGTTTGCAAACATTCAAGCCACCACCTCCTTTGAGGGTAATAACTAGCTTGTCTTTCCATCTGATCTCTTCTATTAACATTGGTTTAGGCCCTCAATCATGCTTCTTACCTTATGGTGGTGCGCCATTTCCAGGGAGGAGATGCAACTGTTAACTCTGTCCATTTATCTCCAAAGAATAGTGATCACATTATTGTGTGCAATAAGACATCTTCAATATACATAATGACTCTACAAGGACAGGTATAATGTGATTCTTCACATTCCATCGTCTTAGTTATCGTTTTCTTTGTGTTCAAAATTCAGGTGTCCATCGCCATGTACTTTACTTCTTCCTCAGCAGTCAATAAGCCCGAAACATGTACTCCTATATATATTACATGTTTCGGGCTTCTAGTTCTGGGCATTTGATTCCTTTAGTAAGCCTGGTGGCTGTTTGATCAAGTGTTGTTATATATATCAAGATCATACATGAATATTTCATGTGGTTGCAGTGCTAATATACTGTATTATTGTTGCAGTGATTTTTACACTGCACCTTTATTATTATTTCCTGAGTGCAGAATAGAAGTACCTAAATCATGGTTTTGTCTGGTTTATGCCTACTGATGCACAGTTTGCGGTGATTAGAGCTAAATCTATTGGGATTTTGGGACATGACATCACATAAAAAATCCCAACTATCATAGCACAAAGAACCCATAGAGTGTGCTGGGATTCTAAGTTTAGGATCTATCTCAAAGAGTATGCTAGGTTCTTAATCGAAAGGCATAAAGTGGCTATTGAGCATCGAAGTGCATTGCTTTTTTTCATTTTGATGGTTATTTATGAATTCTATTATGGTTATTCTTGACTGGAAACTTGTTACAGGTTGTAAAAAGTTTTTCATCTGGTAAACGGGAAGGGGGAGATTTCCTTGCAGCTTCCGTTTCACCAAAAGGAGAATGGATATATTGTGTTGGTGAAGACATGTAAGGATACTGTGATAAAGTTCTTCATTGCATTTTCATCATCTTAGTTTATTTTGAGTGCCATCATGACTCGTACTTATTTTGCAGGAACATGTATTGCTTTAGCTACCAGTCCGGTAAACTGGAGCATCTAATGAAGGTTTGTATGACATAAAATGAAGTTCTGTTGGCTTGTGCAAATTTATAATGTATTTGTATAACGTTATATTAATGCTTTCTAAATGATAACCCCTTTCTGTATTCATGAATTTCACAGGTCCACGACAAGGATGTGATAGGCATCACTCACCACCCTCATAGGAACTTGATTGCTACTTATGCTGAAGATTGCACGATGAAAACATGGAAGCCTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA001776

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA001776&oldid=39500"