Os11g0303300

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Revision as of 09:08, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0303300| Description = Winged helix repressor DNA-binding domain containing protein| Version = NM_001074271.2 GI:297611681 GeneID:4350334| ...")
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Gene Name

Os11g0303300

Description

Winged helix repressor DNA-binding domain containing protein

Version

NM_001074271.2 GI:297611681 GeneID:4350334

Length

1337 bp

Definition

Oryza sativa Japonica Group Os11g0303300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:11447513..11448849

Sequence Coding Region

11447513..11447592,11448048..11448849

Expression

GEO Profiles:Os11g0303300

Genome Context

<gbrowseImage1> name=NC_008404:11447513..11448849 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:11447513..11448849 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcagcatccgatcaggctccaagcatgttggtcccgaccgacgacgagatgctgcaaacgcaggccgagctgtggcgccacaccctctcctacctcacctccatgactctccggtgcgccgtccacctcggcatccccaccgccatccaccgccacggcggcgccgcctcgctgcccgacctcgtcaccgcgctgtccctccccacggccaagctccccttcctccgccgcctcatgcggctgctggtccactccggcatcttcgcctccgacgatgcagggacgacgtaccgtctcaccccggtctccttcttcctcgtggacggcgccgccgccgccgtgcccgtcgtcgacggccacctcagccaggtgccccacgtgctcgcctcgacgtcgaggcactgcctcgacaccgtggcggggctcgccggctggttcagggaggacttcccggctccgtcgccgccgtcgccgttcgagcacgtccacggcgtgacacctctcgagagcacagcgaggcttggcccggaggatgcggcgctgttccaggaaggcctgagggtgtacgacgcctccgggttcgccgtggttctccgggagtgccgcgacgtgttcgacggcgtcgagtcgctgaccgactgcggcggcggcgacggcacggcggcgagggccatcgccgaggccttcccgcacgtcaagtgctggacctcgcccgtgtggtcggcgacgtcccggccgacggtgttgttgagtacgtggcaggtgacatgttcgacttcatcccaccgagtcaagcaagtaattgacctttttccccatgaattcagaggattgcattgctggtttactgcaagggccttcttgttgatgtgtaaatag</cdnaseq>

Protein Sequence

<aaseq>MAASDQAPSMLVPTDDEMLQTQAELWRHTLSYLTSMTLRCAVHL GIPTAIHRHGGAASLPDLVTALSLPTAKLPFLRRLMRLLVHSGIFASDDAGTTYRLTP VSFFLVDGAAAAVPVVDGHLSQVPHVLASTSRHCLDTVAGLAGWFREDFPAPSPPSPF EHVHGVTPLESTARLGPEDAALFQEGLRVYDASGFAVVLRECRDVFDGVESLTDCGGG DGTAARAIAEAFPHVKCWTSPVWSATSRPTVLLSTWQVTCSTSSHRVKQVIDLFPHEF RGLHCWFTARAFLLMCK</aaseq>

Gene Sequence

<dnaseqindica>1258..1337#1..802#atggcagcatccgatcaggctccaagcatgttggtcccgaccgacgacgagatgctgcaaacgcaggccgagctgtggcgccacaccctctcctacctcacctccatgactctccggtgcgccgtccacctcggcatccccaccgccatccaccgccacggcggcgccgcctcgctgcccgacctcgtcaccgcgctgtccctccccacggccaagctccccttcctccgccgcctcatgcggctgctggtccactccggcatcttcgcctccgacgatgcagggacgacgtaccgtctcaccccggtctccttcttcctcgtggacggcgccgccgccgccgtgcccgtcgtcgacggccacctcagccaggtgccccacgtgctcgcctcgacgtcgaggcactgcctcgacaccgtggcggggctcgccggctggttcagggaggacttcccggctccgtcgccgccgtcgccgttcgagcacgtccacggcgtgacacctctcgagagcacagcgaggcttggcccggaggatgcggcgctgttccaggaaggcctgagggtgtacgacgcctccgggttcgccgtggttctccgggagtgccgcgacgtgttcgacggcgtcgagtcgctgaccgactgcggcggcggcgacggcacggcggcgagggccatcgccgaggccttcccgcacgtcaagtgctggacctcgcccgtgtggtcggcgacgtcccggccgacggtgttgttgagtacgtggcaggtgacatgttcgacttcatcccaccgagtcaagcaaggtaattaattaattaattaacaacatgagtgagtaattcgtaatccattttgtatatatatcttacacgaaaagaaacctgcactagttctgaatcggtgaaacctttaatttaatctgaacacatgaaagtttttaatataacttgaggcgaacgcgtgcttcgcacgctgcaccagtggtgccatttaggagaatcagtgattacataagttgaggtaggcagttgaaacaatgttctttgtaagttcaatgaaggacatgtataagtataactaaatgatgtatacagattgaggacagtaaatacataacaaaacttgccatgtgtacgatgacaggatatacagtacatagtagctttatagcagtagcattgcaacagttctgctagatgagcacatacgactatattacagatggctaaattctaatgtggtttggatgcctttgcagtaattgacctttttccccatgaattcagaggattgcattgctggtttactgcaagggccttcttgttgatgtgtaaatag</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0303300, RefSeq:Os11g0303300