Os11g0305400

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Revision as of 09:08, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0305400| Description = Winged helix repressor DNA-binding domain containing protein| Version = NM_001074278.2 GI:297611688 GeneID:4350342| ...")
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Gene Name

Os11g0305400

Description

Winged helix repressor DNA-binding domain containing protein

Version

NM_001074278.2 GI:297611688 GeneID:4350342

Length

2407 bp

Definition

Oryza sativa Japonica Group Os11g0305400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:11582991..11585397

Sequence Coding Region

11582991..11583287,11584588..11585397

Expression

GEO Profiles:Os11g0305400

Genome Context

<gbrowseImage1> name=NC_008404:11582991..11585397 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:11582991..11585397 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcagcacaagctcctaccatgttggcaccaaccaacgaggagctgctgcaagcacaggccgatctatggcgccacagcctctgctacatcacgtctctgagtctccaatgtgtcatcaagcttggcatccccaccgccatccaccgcgccggcggcgccgcgtcgctgcccgacctggttaccgctctgtccctcccgccgtccaagctaccgttcctccgccgcctcatgcggctgctggtccactccggcgtcttcgccgccgacgacaccaccgataccggaacgtaccgtctcaccccgctgtcatgcctcctggtggacggcgacgacgacggcgccgccatcgtcgacggccaccccagccaggtgcccacggtgctcgccatggggtcgaggcactgcgtcgaggccgccatggggctcgcggattggatcaagaaggattcgccgtcgctgctgttcgaagacgtgcatggcgcgacgcccttcgacgagagcatggcggatttggacccggagacacacgggctgctcaacgaaggtctggcggcgcacgacggctcgggattcgccgccgttctgcgggagtgtcgtgaggtgttccaggggctggagtcgctgacagactgcggcggcggcgacggcgcgacggcgaggaccatcgtcgaggccttcccacacgtcaagtgcactgtgctggaccttcctcgcgtgattggcgacaaaacgactgatggggttgtgagctatgtggccggtgacatgctcagcttcatcccacctgcacaagctgtgatgctaaaggttgtacttcaccattggagtgaccaggattgcgtgaaaatcctagctcattgcaagaaagctattccatcacgagaggcaggaggtaaagtgatcatcattgatgtagtgattagttctacctccggaccattgctggaagccgagctccttatggatgtgggcatgatactgatcggcaaaggccaacagcgagatgaaaacaagtggtgtgatctcttcaaaaaagcgggcttcagtgattacaagattgtgaagaagctaggaattcgaggcatctttgaggtctatccatag</cdnaseq>

Protein Sequence

<aaseq>MAAQAPTMLAPTNEELLQAQADLWRHSLCYITSLSLQCVIKLGI PTAIHRAGGAASLPDLVTALSLPPSKLPFLRRLMRLLVHSGVFAADDTTDTGTYRLTP LSCLLVDGDDDGAAIVDGHPSQVPTVLAMGSRHCVEAAMGLADWIKKDSPSLLFEDVH GATPFDESMADLDPETHGLLNEGLAAHDGSGFAAVLRECREVFQGLESLTDCGGGDGA TARTIVEAFPHVKCTVLDLPRVIGDKTTDGVVSYVAGDMLSFIPPAQAVMLKVVLHHW SDQDCVKILAHCKKAIPSREAGGKVIIIDVVISSTSGPLLEAELLMDVGMILIGKGQQ RDENKWCDLFKKAGFSDYKIVKKLGIRGIFEVYP</aaseq>

Gene Sequence

<dnaseqindica>2111..2407#1..810#atggcagcacaagctcctaccatgttggcaccaaccaacgaggagctgctgcaagcacaggccgatctatggcgccacagcctctgctacatcacgtctctgagtctccaatgtgtcatcaagcttggcatccccaccgccatccaccgcgccggcggcgccgcgtcgctgcccgacctggttaccgctctgtccctcccgccgtccaagctaccgttcctccgccgcctcatgcggctgctggtccactccggcgtcttcgccgccgacgacaccaccgataccggaacgtaccgtctcaccccgctgtcatgcctcctggtggacggcgacgacgacggcgccgccatcgtcgacggccaccccagccaggtgcccacggtgctcgccatggggtcgaggcactgcgtcgaggccgccatggggctcgcggattggatcaagaaggattcgccgtcgctgctgttcgaagacgtgcatggcgcgacgcccttcgacgagagcatggcggatttggacccggagacacacgggctgctcaacgaaggtctggcggcgcacgacggctcgggattcgccgccgttctgcgggagtgtcgtgaggtgttccaggggctggagtcgctgacagactgcggcggcggcgacggcgcgacggcgaggaccatcgtcgaggccttcccacacgtcaagtgcactgtgctggaccttcctcgcgtgattggcgacaaaacgactgatggggttgtgagctatgtggccggtgacatgctcagcttcatcccacctgcacaagctgtgatgctaaaggtaatattcaaatgaaaattttcaatatgttttgagaaattgtatggtacttcttgggttgagatctctggccaccgagccagatggaggcgtgtggtgtggtctgcccagagccagcactctccgtaacaaaaatggcactgctacagaaatggttttttagacggcccaaaacacattttcgtgtgcggaaggttggcccgtccgccctaaatggtatgtgaaaatcgctattttcttttgcataatcggattttcgcgtgcgggtgcttacgttatccgcttgcaaaaaaaaatgtgaaaaataaaatctcggagccctagctaggtcgtcgacagcgaagtcgtcatcgtctctgtcgctgtcatcgcagctcgtcgtcatcgtcgccgtcacccctccccgtgtctccactgccctccaccgtcggatccgcacgagggagcacgggaaaggtcgccgccgctaggggagcatgtgggaaacgatgccggctctggatagtgggcctccactgcgggatctgggcgggaaaggggcgctgccatagggggagaacggggacggccgccagcgcttccgtagttgggggctgcgctgccatatgaatacgccgccgctcctggccgccatgctgccgccacccgccccaaccagtgcttgcgagtgcttgagtgagagaggtgaggaggtgagagggatgagaggagaggctaaggatgacatgatgagtggaagtgagagagatggagagaatgactttaggcggatccttaagaggcccgctggcaaaaatatattttcgcgtgcagcccctaaagaggtccgcttgcaaaaacaggcttattgtgaacccttaagaggcctgcctacggaaatcgatttttgtgtgtgattcccttaaggagccgtatgtaaaagtggagatcgatttttgcataggcgcccagttacggtccgtctacaatctaaagagtgtcccgcacagaaaaaaaaacatttatttagtagtgtgcatgagtttatgggctcgtgcgcacgttcaaaatcgcgtgtgttgaacatataacatgcaactaactccaatggactcgtccccggctcccatgcggtatactaaaattttcaatgtatagtttgagatctctcattgatatgtaccaatatttacattaaaatatgatatcacctcgaggactactttagtacctagccatatcgatttgcagattaactctatataaaacgagtgtaatttgatggattggttaacttttatgccactttcgtttgtggtaggttgtacttcaccattggagtgaccaggattgcgtgaaaatcctagctcattgcaagaaagctattccatcacgagaggcaggaggtaaagtgatcatcattgatgtagtgattagttctacctccggaccattgctggaagccgagctccttatggatgtgggcatgatactgatcggcaaaggccaacagcgagatgaaaacaagtggtgtgatctcttcaaaaaagcgggcttcagtgattacaagattgtgaagaagctaggaattcgaggcatctttgaggtctatccatag</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0305400, RefSeq:Os11g0305400