Os09g0328600

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Revision as of 07:21, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0328600| Description = Ankyrin repeat containing protein| Version = NM_001188850.1 GI:297726830 GeneID:9267675| Length = 3458 bp| Definiti...")
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Gene Name

Os09g0328600

Description

Ankyrin repeat containing protein

Version

NM_001188850.1 GI:297726830 GeneID:9267675

Length

3458 bp

Definition

Oryza sativa Japonica Group Os09g0328600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:10308612..10312069

Sequence Coding Region

10308612..10309364,10309453..10309985,10310764..10311338,10312038..10312069

Expression

GEO Profiles:Os09g0328600

Genome Context

<gbrowseImage1> name=NC_008402:10308612..10312069 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:10308612..10312069 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatggatcaatccctccaaaaccaccgagttgccgccagcctcaaagggaaactcacaataactctgagaacacgggtgccactggtaacgatcaggctcaggatgagggttttctactccatgtcgtagcagccaatggggatggtgaaaactacaggaaatgcgcgacattgctctctgggatggataaaacacgtctcttcgcacgcaacagcgagaataagaccgctctagagtgtgcagcaaatgctgggtacaccaatatggtttttcatctccttgacatggagcgaaaacacaatttttgtggactgaacactaaaccaaatgagatcttgaagaagacaagtggacgctcagagacaccgttgcacgaggcagtgaggcagcgttgtgaacgtaagattgaagagttgaagggcaaggacagtggtttagcgcgtgtcccggacataaacggcatgtctccgctctacctcgccatccccttgggatacagagacatcgttgataagctaaccttaacctttggtgatgcgaatctgtcctacgatggaccaaatggacaaaatgtgctacatgctgcggctcttcagagtgcaggaaggagaggagatctcatgaataaagctgattggtctggaagtacacctcttcactttgcagcatcagtaggagttcagggcgtaacaactgcgctgcttgatggcatagaccaagatcgcagaacggactacacccaacggcccgacaacaatgggatgttccccatacacatagctgcttctgttggttcaatggacacaatcacctcattggtcaatgccgatcaagactgtgccactcttcgtgataatgttaaaggtagaacattgcttcatatcgccattgagaatcggaagtacaaagtagtcaaattggtgtgcaaagatccgaggttcaaggaaactctgaatttggaggacaacgacggtaatactgcattacatcttgctgtaaagaaaagagacgagtacatcttcacgtatctcctacagaataaggccgtggagctcaaccatgtcaacctagaaggctatacaccactcgatcttgcaaaagtgataaggatggaagactactttgcctctccccagaacccaacagaatggatggtgagggtattggctcattctggagccgtcttcagtcctcgtaggcgtgatgaactgatccgtggtggtagctctcaagaacaagaaaagcacgggaaaaccctttcagagtcgactgaaagcgtgttggtcgcatcggcgcttatcgcgacactgactttcgctgcagcattcaccatgccagggtcctacagaacgacaggcccaaaggaaggcacgccagcactgggtgccctctacggtttcaaggttttcctcgtcgccgacatcttggctttcttctgttccgttgcggccaccttcagccttgccgagtacgggaaccgcgggacggtggatccccttgtccgctgtcggtactcacagcgtgccgtgtggctcttccatgtcgccctcaggagcatcatagtagccttcgcgttcggggtctcggtggtgatgtggaacatttctctcagtgccatcagcatcggtggtgtagccactatcgctgtcgtgttctacgggaacgttcctcttggtcaagatttcaggcttatgttgctgatgcaccgcaggtttggcttctcacgttcttggaacctgtatccttctacggcctctcatctcaactggacatcctggcagctcaaaagcttttccgcgacgctggtttggaatctgatgaatcttttttggacttatgtcctcatatttgcacttgctggcttcgctcaactgaagcagaaacattaa</cdnaseq>

Protein Sequence

<aaseq>MDGSIPPKPPSCRQPQRETHNNSENTGATGNDQAQDEGFLLHVV AANGDGENYRKCATLLSGMDKTRLFARNSENKTALECAANAGYTNMVFHLLDMERKHN FCGLNTKPNEILKKTSGRSETPLHEAVRQRCERKIEELKGKDSGLARVPDINGMSPLY LAIPLGYRDIVDKLTLTFGDANLSYDGPNGQNVLHAAALQSAGRRGDLMNKADWSGST PLHFAASVGVQGVTTALLDGIDQDRRTDYTQRPDNNGMFPIHIAASVGSMDTITSLVN ADQDCATLRDNVKGRTLLHIAIENRKYKVVKLVCKDPRFKETLNLEDNDGNTALHLAV KKRDEYIFTYLLQNKAVELNHVNLEGYTPLDLAKVIRMEDYFASPQNPTEWMVRVLAH SGAVFSPRRRDELIRGGSSQEQEKHGKTLSESTESVLVASALIATLTFAAAFTMPGSY RTTGPKEGTPALGALYGFKVFLVADILAFFCSVAATFSLAEYGNRGTVDPLVRCRYSQ RAVWLFHVALRSIIVAFAFGVSVVMWNISLSAISIGGVATIAVVFYGNVPLGQDFRLM LLMHRRFGFSRSWNLYPSTASHLNWTSWQLKSFSATLVWNLMNLFWTYVLIFALAGFA QLKQKH</aaseq>

Gene Sequence

<dnaseqindica>2706..3458#2085..2617#732..1306#1..32#atggatggatcaatccctccaaaaccaccgaggtatactgcttccttaggcacatgcaagccatgcaaccgcacggggcccctaatttttaggtggcccaaaattttatggttcaatataattaggatctctagattctttttttttttcaaatttcacttcttcagttccactgaaccagctagaacgagttatttttgggtaccatttcatatcttttagttaaaaatattagactagtaaaatataaataaaactaaagtttagactgaaaccaaatcaactttttatatatcagttatgtatttaaaagttattttgtcggaaagaaaatttggattctatatcaagtacaactctacatttcttaaatattacaactccacctcacttacgagttgctaattagtaattcaatatttcaggaaatattaatttaaaataaaatttgggctctagaactagtacgactcaatacttgttaatttcaagtttttcgaattattaaattatggaaaacttgacccaatacctattgagtttgtattcattgattccaaattttagaaataatatttaatcgatggaaaacttaaattaataatccatgacaattacaattttgtatatttattaatgtaacaaaatggtgttaattctatatatatgcgtgcaaatctcctactttggtatatactaaataattataactatgtatgtttataacccagttgccgccagcctcaaagggaaactcacaataactctgagaacacgggtgccactggtaacgatcaggctcaggatgagggttttctactccatgtcgtagcagccaatggggatggtgaaaactacaggaaatgcgcgacattgctctctgggatggataaaacacgtctcttcgcacgcaacagcgagaataagaccgctctagagtgtgcagcaaatgctgggtacaccaatatggtttttcatctccttgacatggagcgaaaacacaatttttgtggactgaacactaaaccaaatgagatcttgaagaagacaagtggacgctcagagacaccgttgcacgaggcagtgaggcagcgttgtgaacgtaagattgaagagttgaagggcaaggacagtggtttagcgcgtgtcccggacataaacggcatgtctccgctctacctcgccatccccttgggatacagagacatcgttgataagctaaccttaacctttggtgatgcgaatctgtcctacgatggaccaaatggacaaaatgtgctacatgctgcggctcttcagagtgcaggtaagggatgtataccctgcttaacgctggcgtggcattacacacgtataagttgtttttgttttctatataattatgcagagttggtttatatttagtcgattctgcctgatatctttcaaaacggttcaataagccagtggttttatgagaatgtctacaataatgcctgcacttgctttgcttcctctctgaaccctgcatcaacatttactttcgcatagccttcaggtggtgcttgtatttctcctgaatatcacattagtacttgcttgttatgctttcgcccttgactcattatacatagcacctttccccttggcatcatctggttgttgtcagatagtcaacaatgtgctttcataattgatcaaatcattgatcaacactatacattatttactgctttccttctcttgttacaaactcttttatgggcttgtgtgtgttttggttatgtgcatttatgcagaagccggaagttttcttagtatggttctattaacttgttgtaatcgtctgagattaataaaagctcctttatcaaaaaaaaaattataatcttgaggtagtctcctagcaacagtaaaaggctcacgtacgtgttaatggctgtgcatcctccagaatctttttgagtgcttattttggaatgaaagtttgatttgttctttgccatagaatttaggttgtacattctttgacacaattggtatcataactagctaggtactaattaacggaaatactcgatggcagaactctgaattgattctaggaaggagaggagatctcatgaataaagctgattggtctggaagtacacctcttcactttgcagcatcagtaggagttcagggcgtaacaactgcgctgcttgatggcatagaccaagatcgcagaacggactacacccaacggcccgacaacaatgggatgttccccatacacatagctgcttctgttggttcaatggacacaatcacctcattggtcaatgccgatcaagactgtgccactcttcgtgataatgttaaaggtagaacattgcttcatatcgccattgagaatcggaagtacaaagtagtcaaattggtgtgcaaagatccgaggttcaaggaaactctgaatttggaggacaacgacggtaatactgcattacatcttgctgtaaagaaaagagacgagtacatcttcacgtatctcctacagaataaggccgtggagctcaaccatgtcaacctagaaggctatacaccactcgatcttgcaaaagtgataaggatggaagactactttgcctctccccaggtatatgcataaaaccatcaaaattttggcataaattaaaatacatacaaaacagatctcctgacatttcaagtctccttccctgcagaacccaacagaatggatggtgagggtattggctcattctggagccgtcttcagtcctcgtaggcgtgatgaactgatccgtggtggtagctctcaagaacaagaaaagcacgggaaaaccctttcagagtcgactgaaagcgtgttggtcgcatcggcgcttatcgcgacactgactttcgctgcagcattcaccatgccagggtcctacagaacgacaggcccaaaggaaggcacgccagcactgggtgccctctacggtttcaaggttttcctcgtcgccgacatcttggctttcttctgttccgttgcggccaccttcagccttgccgagtacgggaaccgcgggacggtggatccccttgtccgctgtcggtactcacagcgtgccgtgtggctcttccatgtcgccctcaggagcatcatagtagccttcgcgttcggggtctcggtggtgatgtggaacatttctctcagtgccatcagcatcggtggtgtagccactatcgctgtcgtgttctacgggaacgttcctcttggtcaagatttcaggcttatgttgctgatgcaccgcaggtttggcttctcacgttcttggaacctgtatccttctacggcctctcatctcaactggacatcctggcagctcaaaagcttttccgcgacgctggtttggaatctgatgaatcttttttggacttatgtcctcatatttgcacttgctggcttcgctcaactgaagcagaaacattaa</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0328600, RefSeq:Os09g0328600