BGIOSGA001879

From RiceWiki
Revision as of 10:27, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA001879| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA001879, complete gene.| tag = OS01G02...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA001879

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA001879, complete gene.

LocusTag

OS01G0282800

Ensembl Transcript ID

BGIOSGA001879-TA

Ensembl Protein ID

BGIOSGA001879-PA

Length

2616

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:11041552..11044167

Sequence Coding Region

11043774..11044167,11042765..11043034,11041552..11042231

Genome Context

<gbrowseImage1> name=IndicaChromosome01:11041552..11044167 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:11041552..11044167 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGGGAGATCCTGCACATCCAGGGCGGGCAGTGTGGCAACCAGATCGGCTCCAAGTTCTGGGAGGTGGTCTGCGACGAGCACGGCATCGACCCCACCGGCCGCTACGTCGGCACCTCCGACCTCCAGCTCGAGCGCGTCAACGTCTACTACAATGAGGCCTCCTGCGGCCGCTTCGTGCCCCGCGCCGTGCTCATGGACCTCGAGCCGGGTACCATGGACAGCGTCCGCACCGGCCCCTATGGCCAGATCTTCCGCCCCGACAACTTCGTCTTCGGCCAGTCCGGCGCCGGCAACAACTGGGCCAAGGGGCACTACACCGAGGGCGCGGAGCTCATCGACTCTGTGCTCGATGTCGTCAGGAAGGAGGCTGAGAACTGCGACTGCCTCCAAGGTTTCCAAGTTTGCCATTCCCTTGGAGGAGGCACTGGATCTGGAATGGGCACACTCCTGATCTCCAAGATCAGAGAGGAGTACCCTGACCGGATGATGCTCACATTTTCTGTCTTCCCTTCACCAAAGGTCTCAGACACAGTTGTTGAGCCTTACAATGCAACTCTCTCTGTCCATCAGTTGGTGGAGAATGCTGATGAGTGCATGGTTCTTGACAATGAGGCACTTTATGACATCTGCTTCCGCACCCTCAAGCTGACCACTCCTAGCTTTGGCGACCTGAACCACTTGATCAGTGCTACAATGAGTGGAGTTACTTGCTGCCTTCGCTTCCCTGGTCAATTGAACTCTGACCTCCGCAAGCTGGCCGTGAACTTGATCCCTTTCCCTCGCCTGCACTTCTTCATGGTGGGCTTTGCGCCACTCACCTCGCGTGGCTCGCAGCAGTATCGCGCCCTCACTGTCCCTGAGCTCACCCAGCAAATGTGGGACGCCAAGAACATGATGTGCGCCGCTGACCCGCGCCATGGCCGCTACCTCACGGCCTCCGCCATGTTCCGCGGCAAGATGAGCACCAAGGAGGTGGACGAGCAGATGATCAACGTCCAGAACAAGAACTCGTCCTACTTCGTCGAGTGGATCCCCAACAACGTGAAGTCCAGCGTGTGCGACATCCCGCCGCGCGGCCTCTCCATGGCGTCCACCTTCATCGGCAACTCCACCTCCATCCAGGAGATGTTCCGCCGCGTGAGCGAGCAGTTCACCGCCATGTTCAGGAGGAAGGCCTTCTTGCATTGGTACACCGGCGAGGGCATGGACGAGATGGAGTTCACCGAGGCCGAGAGCAACATGAACGACCTTGTCTCCGAGTACCAGCAGTACCAGGATGCCACCGCCGACGAGGAGGGCGACTACGAGGACGAAGAGGAGCAGGTCCCCGAAGACGAGTAA</cdnaseq>

Protein Sequence

<aaseq>MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGTSDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADEEGDYEDEEEQVPEDE</aaseq>

Gene Sequence

<dnaseqindica>1..394#1134..1403#1937..2616#ATGAGGGAGATCCTGCACATCCAGGGCGGGCAGTGTGGCAACCAGATCGGCTCCAAGTTCTGGGAGGTGGTCTGCGACGAGCACGGCATCGACCCCACCGGCCGCTACGTCGGCACCTCCGACCTCCAGCTCGAGCGCGTCAACGTCTACTACAATGAGGCCTCCTGCGGCCGCTTCGTGCCCCGCGCCGTGCTCATGGACCTCGAGCCGGGTACCATGGACAGCGTCCGCACCGGCCCCTATGGCCAGATCTTCCGCCCCGACAACTTCGTCTTCGGCCAGTCCGGCGCCGGCAACAACTGGGCCAAGGGGCACTACACCGAGGGCGCGGAGCTCATCGACTCTGTGCTCGATGTCGTCAGGAAGGAGGCTGAGAACTGCGACTGCCTCCAAGGTCGATTCCTTGCTCCACTGTTAAAATGTTGCTTGTTAATTATGTTCGCGTGATTCCCGTGATGCGTGTTAGTTCAGATCTGGGTGAAAATAGTTCCAGATTTGGTAGTGTCGGCTGCTTTTTTTTCTTTTCTTTTATAAGCATATAATTTATCATGCGACGCTTTAGCTTTTTAGTAGAGTATTTTATTTCCTGTAGTAGCTTTTTGTTAGCTAGTACGTGTCACCCTGATATAATGGAACTTTAATAATCTATAATGTAGATTCCAAAGTGCTAATTATTTAGTCTTTGCTAAACTTGTTGTGCGGTATTATTGACCATTGTGATTTACCCACCTTGTGCTGTTTACAGCGAGTGAGGTCTTTACTCTTGGTTTAGTGTTTGGTTTCTAATAAGACTACTTGTTGCTATGATTAGCTTCTGTTGTAGTTCAATCCAGTGTAATTTTGTTGTCATGTAACATAAGTGCGGATAGTTTTAAGCTGGCAAACTTGATTGTTGTGGTTACAGTTTTTTATGTTTAAAGCTCTGTTCAAATGATTTAGCCTGGGATTGTTTTATTGTTGTCAGTCTCTTATTAAGCTGTAAATCTTATTGCTAGCTTGTTATTCTGAAATATGGAGTAGTTTTTAATCCTTGCCATAAAACCCTACCATGAAATCTATTTCAGCAATCCTATGGCTATTATGTTAGCTAGCACTGCATCACCTTATATATGTTTTGTCTTTTGTGTAATCAGGTTTCCAAGTTTGCCATTCCCTTGGAGGAGGCACTGGATCTGGAATGGGCACACTCCTGATCTCCAAGATCAGAGAGGAGTACCCTGACCGGATGATGCTCACATTTTCTGTCTTCCCTTCACCAAAGGTCTCAGACACAGTTGTTGAGCCTTACAATGCAACTCTCTCTGTCCATCAGTTGGTGGAGAATGCTGATGAGTGCATGGTTCTTGACAATGAGGCACTTTATGACATCTGCTTCCGCACCCTCAAGCTGACCACTCCTAGCTGTAAGTTAATTCTTACTCTGGTTCTAACTAGTGGCATATGCTGTTCAGATTTTCAGAGATGTATTTGGTAGCTTAGTTTCATTCCAATGTCAATGCTTGCTTTGGTAGATCCATGTATCTTGTGTGGATCTTGCTATCCATTATTTGCAGTCCAATTTGCATGGTCCCAAGCCCAGCATGATCTACCTTGCCTTGTTTAATTATGAGGCCAGTTACATCTGAATCCCCTTGCTGGTTCGGTGGTTTAATTTATTTGCACCCATCGTACAGATCAAGCATGTTTCCTGTACACATTATTGCATCATAATTCAGTAGCTGGCATGATAGTGCCACCTACTCCTACATAAGGGCATCAACTTTTCTTAGGAATGTTGTTGAGTGCATCATGTACTACTATCTTTATTTAACCATAATTATTTTTGATTCATGTTAAAAACTTGCATCTAGTTTCTGTCTGTACTACAGTCTCTGCCTGTAAAGTTGCTATAGTGTTTTTATCCAGTTTGGCTAACCTAAATTTTTCATATGAACAGTTGGCGACCTGAACCACTTGATCAGTGCTACAATGAGTGGAGTTACTTGCTGCCTTCGCTTCCCTGGTCAATTGAACTCTGACCTCCGCAAGCTGGCCGTGAACTTGATCCCTTTCCCTCGCCTGCACTTCTTCATGGTGGGCTTTGCGCCACTCACCTCGCGTGGCTCGCAGCAGTATCGCGCCCTCACTGTCCCTGAGCTCACCCAGCAAATGTGGGACGCCAAGAACATGATGTGCGCCGCTGACCCGCGCCATGGCCGCTACCTCACGGCCTCCGCCATGTTCCGCGGCAAGATGAGCACCAAGGAGGTGGACGAGCAGATGATCAACGTCCAGAACAAGAACTCGTCCTACTTCGTCGAGTGGATCCCCAACAACGTGAAGTCCAGCGTGTGCGACATCCCGCCGCGCGGCCTCTCCATGGCGTCCACCTTCATCGGCAACTCCACCTCCATCCAGGAGATGTTCCGCCGCGTGAGCGAGCAGTTCACCGCCATGTTCAGGAGGAAGGCCTTCTTGCATTGGTACACCGGCGAGGGCATGGACGAGATGGAGTTCACCGAGGCCGAGAGCAACATGAACGACCTTGTCTCCGAGTACCAGCAGTACCAGGATGCCACCGCCGACGAGGAGGGCGACTACGAGGACGAAGAGGAGCAGGTCCCCGAAGACGAGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA001879