BGIOSGA001975

From RiceWiki
Revision as of 10:29, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA001975| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA001975, complete gene.| tag = OS01G02...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA001975

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA001975, complete gene.

LocusTag

OS01G0254300

Ensembl Transcript ID

BGIOSGA001975-TA

Ensembl Protein ID

BGIOSGA001975-PA

Length

3300

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:9280678..9283977

Sequence Coding Region

9283600..9283977,9282818..9283520),complement(9280678..9281357

Genome Context

<gbrowseImage1> name=IndicaChromosome01:9280678..9283977 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:9280678..9283977 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTCCACCGGCGCGCTGCTTCTGTTGCTCTTGTTTGTGCTTGCGTGCGGCGGCAATGGCGGCGCGGCCGCCGCGGTGTTCTCCGGGTGTTCGTTCGAGAGCCAGGAGGAGGCCGAGGCGTTCGAGGCCGCGCTGCTGCAGCAGGCGTGCTTCAACGTGACGGCGTTCGGTGGAGGCGGAGGTGGAGGTGGGGGCGAGGGCGGCTGCGTGTCGCGGCTCGACACGGCGCGCGGCGGCGCGGGGAGTGGCCCCGTGCCGGTGCTCCGCGCGGCGGTCCGGGACACGCTCGGCGAGGCGGTGGGCGCCGAGGCGGACGTGGCGGGGCTCGCGTCGCTGTCCAACCACGCGCGGGAGGAGATGGGCGTGCGCGACTGCCGGCGGAGGAGGAGGAGGATGNAGACGGAGCCGGAGACGAGGCGCCGCCGCAGCCGCGGCGCGCGTGCCGAGGACGACATCCACGCCTGGCTCAGCGCGGCGATGGGCAACCAGGGCACCTGCCTCGACGGCTTCCACGGCACCGACGGCCGCCTCCTCCGCCGCGTCGAGTCGGCCGTGACGCAGCTCACTCAGCTCGTCAGCAACCTCCTCGCCATGCACAAGAAGCTCCGCGACATCACGCCGCAGCACCAACACCAACACCACCACCACCCCGGCAACAACAACAACAAGAACGGCACAGCCGACGGCGCCGCCGCCGGCGGGGATGACACCGGCCCGTCGTCGGATCTACCGCCATGGGTGACGGACGTCGTCGACGATGTCGAGGAGGAGGTCACGGCGACGCGCGGGCGAGGGAGGTCGTCGTCATCGGGAAGGAAGGCGATGCGCGTGGACGTGGTGGTGGCGCAGGACGGGAGCGGGCGGTGGCGGACGGTGAGCGAGGCGGTGGCGCGGGCGCCGAGCCACAGCAGGAGGAGGTACGTGATCTACGTGAAGCGAGGGGTGTACGAGGAGAACGTGGAGGTGAGGAAGAAGAAGACGAACATCGTCATCGTCGGCGAGGGGATGGGGGAGACGGTCATCACCGGCAGCCGGAGCATGGCCGCCGGCTGGACCACCTTCCGGAGCGCCACGTTTGCGGTGTCAGGGACGGGGTTCATCGCACGGGACATGACGATTCGGAACACGGCGGGGCCGGCGGCGCACCAGGCGGTGGCACTACGCGTCGACTCCGATCGCTCCGCCTTCTTCCGCATCGCCGTCGAGGGCCACCAGGACACGCTCTACGCGCACTCCCTCCGCCAGTTCTACCGCGACTGCCGCGTCTCCGGCACCGTCGACTTCATCTTCGGCAACGGCATCGCCGTCATCCAGCGCACCACCATCTCTACCCTCCCGCCCGCCGCCGGCCAGAACGCCGGCAGCGTCACGGCGCAGGGTCGGAGGGACCCCAACCAGAACACCGGCTTCGCCCTCCATGCTTGCGTCGTGGAGGCCAAGTACCCGACCTACCTCGGACGCCCATGGAAGCCCTTCTCCCGGGTGGTCGTCATGGAGTCCTACCTCGGCGCAGGTGTCCAGCCGCGCGGATGGCTGGAGTGGGACGGCGACGGCGGCGAGCTCGCCACGCTGTTCTATGGGGAGTACCGCAACTACGGGCCTGGCGCCAACATCGGCGGCCGGGTGCGGTGGCCCGGATACCACGTGATCATGGACGCCGCCGTCGCTGCGCGCTTCACCGTGCGGCGGTTCATCGACGGCCTCGCTTGGCTACCCTCCACCGGCGTCACCTTCACCGCTGACCTCAACAGGAAATGA</cdnaseq>

Protein Sequence

<aaseq>MASTGALLLLLLFVLACGGNGGAAAAVFSGCSFESQEEAEAFEAALLQQACFNVTAFGGGGGGGGGEGGCVSRLDTARGGAGSGPVPVLRAAVRDTLGEAVGAEADVAGLASLSNHAREEMGVRDCRRRRRRMXTEPETRRRRSRGARAEDDIHAWLSAAMGNQGTCLDGFHGTDGRLLRRVESAVTQLTQLVSNLLAMHKKLRDITPQHQHQHHHHPGNNNNKNGTADGAAAGGDDTGPSSDLPPWVTDVVDDVEEEVTATRGRGRSSSSGRKAMRVDVVVAQDGSGRWRTVSEAVARAPSHSRRRYVIYVKRGVYEENVEVRKKKTNIVIVGEGMGETVITGSRSMAAGWTTFRSATFAVSGTGFIARDMTIRNTAGPAAHQAVALRVDSDRSAFFRIAVEGHQDTLYAHSLRQFYRDCRVSGTVDFIFGNGIAVIQRTTISTLPPAAGQNAGSVTAQGRRDPNQNTGFALHACVVEAKYPTYLGRPWKPFSRVVVMESYLGAGVQPRGWLEWDGDGGELATLFYGEYRNYGPGANIGGRVRWPGYHVIMDAAVAARFTVRRFIDGLAWLPSTGVTFTADLNRK</aaseq>

Gene Sequence

<dnaseqindica>1..378#458..1160#2621..3300#ATGGCGTCCACCGGCGCGCTGCTTCTGTTGCTCTTGTTTGTGCTTGCGTGCGGCGGCAATGGCGGCGCGGCCGCCGCGGTGTTCTCCGGGTGTTCGTTCGAGAGCCAGGAGGAGGCCGAGGCGTTCGAGGCCGCGCTGCTGCAGCAGGCGTGCTTCAACGTGACGGCGTTCGGTGGAGGCGGAGGTGGAGGTGGGGGCGAGGGCGGCTGCGTGTCGCGGCTCGACACGGCGCGCGGCGGCGCGGGGAGTGGCCCCGTGCCGGTGCTCCGCGCGGCGGTCCGGGACACGCTCGGCGAGGCGGTGGGCGCCGAGGCGGACGTGGCGGGGCTCGCGTCGCTGTCCAACCACGCGCGGGAGGAGATGGGCGTGCGCGACTGCGTGAGCTGGTGGGGTACTCCGCTCGACGAGCTCGGGTGGGCGCTCGACGCCATGGCCGACCCCGACGGCGGCGTCGCAGCGGCGGAGGAGGAGGAGGATGNAGACGGAGCCGGAGACGAGGCGCCGCCGCAGCCGCGGCGCGCGTGCCGAGGACGACATCCACGCCTGGCTCAGCGCGGCGATGGGCAACCAGGGCACCTGCCTCGACGGCTTCCACGGCACCGACGGCCGCCTCCTCCGCCGCGTCGAGTCGGCCGTGACGCAGCTCACTCAGCTCGTCAGCAACCTCCTCGCCATGCACAAGAAGCTCCGCGACATCACGCCGCAGCACCAACACCAACACCACCACCACCCCGGCAACAACAACAACAAGAACGGCACAGCCGACGGCGCCGCCGCCGGCGGGGATGACACCGGCCCGTCGTCGGATCTACCGCCATGGGTGACGGACGTCGTCGACGATGTCGAGGAGGAGGTCACGGCGACGCGCGGGCGAGGGAGGTCGTCGTCATCGGGAAGGAAGGCGATGCGCGTGGACGTGGTGGTGGCGCAGGACGGGAGCGGGCGGTGGCGGACGGTGAGCGAGGCGGTGGCGCGGGCGCCGAGCCACAGCAGGAGGAGGTACGTGATCTACGTGAAGCGAGGGGTGTACGAGGAGAACGTGGAGGTGAGGAAGAAGAAGACGAACATCGTCATCGTCGGCGAGGGGATGGGGGAGACGGTCATCACCGGCAGCCGGAGCATGGCCGCCGGCTGGACCACCTTCCGGAGCGCCACGTTTGGTAAATTCTAGTGCACCGCAGTGATTTAATTTGTCTTTTTGCTAATTACTCCTACTTTTGCTACTCATTTTGGTTACACACTCGTTACTTCGTTAGTGTTCATATACGAATACCAGCTGCGTTGCTGCAGAAAATTAAGATGCATATACTATATACAAATAAAATATAATTTGATTAAAAACTAAAACAATTTGATACAATTGAGCTAAAAATAATTGAGATTGTAGATTTTTTTTAGAGAAGAAAAAAGAGACAATTTAGACTATAGATCTATCATCCAAATGCTAGAAATAATTTAAGTGATGTGGTTTAATAAGAGAAGAGAGAAATATCATTAACTATACTTAGTGCAATGAACTATATGAGTATATAGGATTAGACCAACATGATCGCCAAATATATAGTTTTGAAAGGCTGCATATATCCAGTTGGATATTAAGGCTGGGTAAAAAAATATCATTCTCTAAAAAAATAAAAATATAGTTTTGAAATTATTTTTGTTATTTAAACATGTTTGCAAAACATATAGCCAAATACCTATGAATGTATATCAACCAAAAGTCATTGATTCGAGAGTATTGTATAGAACCATGATATTTGTGGTCTCAAGGTTTTACTAAACCCTTCACTTTTAGCAAGAAAATACGGAGTTCTCTAAAAAAATTAGTGATAAGGAACATCCTTTATACTCTAGAACAATCATAAAAGCGATCATACGTGCTTATACCTTTCCAGCCTATTATCTACTCCTATAGATCGAACCGACCGACCACAATCGTGACCGCATGCAAAAGTGCGCGGCGGCACCCAGTAAATTAGCCGCACACGAACCATTATGACAGCAAGATTCACGTGTGCTTTGCTTGCATCAAGCCCTCATCTAGGCTGGCAGATAAACCGGCTCGTGCATATGCATGCGCGCTAAGAAAAGAATATCCTTAGATGTCCTCTTGCAAAAAGTTTTCCATCCTCCACATATCTAGGGTTTGTTTGTTCGGTTTATTCCGGACTATTGACTATTATGATGTAGTAGAATTAATTATTCCCCTTTCAAACCCCCTCTAATTCATGCTATTTAGGGATTAACCGAGCAATGCCTTAGAGTTGATGTTGTACTTAAATTTAAACCGCGGCACAATGGAATCAAAACATAAATTTGAATGAGATTTTAAGTGGAGTTAAATTTGTACTTCATCCGTTTAAATTATTTGACCTTTTCTTAGTCAAACTTTTTTTTAGATTTGATCAAGTTTGCAAAAAATATAATAACATTTTTAATACAAAATAAACATATTATCAGAATATATCTAATGTTAAATTTAATTAAACTAATTTGGTATTATAGATGTTATTGTTTTTTCTTATAAATTTGATCGAACCTAAATTTTGACTAACTCAAATGTTTTATAATATAAAACGGAGGGAGTAACTGAATTTGGTTTGTGTGTGCGTGCGTGCAGCGGTGTCAGGGACGGGGTTCATCGCACGGGACATGACGATTCGGAACACGGCGGGGCCGGCGGCGCACCAGGCGGTGGCACTACGCGTCGACTCCGATCGCTCCGCCTTCTTCCGCATCGCCGTCGAGGGCCACCAGGACACGCTCTACGCGCACTCCCTCCGCCAGTTCTACCGCGACTGCCGCGTCTCCGGCACCGTCGACTTCATCTTCGGCAACGGCATCGCCGTCATCCAGCGCACCACCATCTCTACCCTCCCGCCCGCCGCCGGCCAGAACGCCGGCAGCGTCACGGCGCAGGGTCGGAGGGACCCCAACCAGAACACCGGCTTCGCCCTCCATGCTTGCGTCGTGGAGGCCAAGTACCCGACCTACCTCGGACGCCCATGGAAGCCCTTCTCCCGGGTGGTCGTCATGGAGTCCTACCTCGGCGCAGGTGTCCAGCCGCGCGGATGGCTGGAGTGGGACGGCGACGGCGGCGAGCTCGCCACGCTGTTCTATGGGGAGTACCGCAACTACGGGCCTGGCGCCAACATCGGCGGCCGGGTGCGGTGGCCCGGATACCACGTGATCATGGACGCCGCCGTCGCTGCGCGCTTCACCGTGCGGCGGTTCATCGACGGCCTCGCTTGGCTACCCTCCACCGGCGTCACCTTCACCGCTGACCTCAACAGGAAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA001975