BGIOSGA002003

From RiceWiki
Revision as of 10:29, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA002003| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA002003, complete gene.| tag = P0034C1...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA002003

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002003, complete gene.

LocusTag

P0034C11.11

Ensembl Transcript ID

BGIOSGA002003-TA

Ensembl Protein ID

BGIOSGA002003-PA

Length

1812

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:8848114..8849925

Sequence Coding Region

8849793..8849925,8849360..8849698),complement(8849027..8849281,8848795..8848928),complement(8848114..8848305

Genome Context

<gbrowseImage1> name=IndicaChromosome01:8848114..8849925 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:8848114..8849925 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCATATTACCATGGTTGCACTCTACATTACAATCTGCTCTATCCTGTTCATCGTGTCCAAGATGCTCATCTCCTTCCTGCTCTACAAGAAGTGGGCTCGCAAGAAACGGATCATCGAGAACAGCCTGACAGGTGGCAAGATGGTGATGTTCAGGTCGGCGGCGATGCAGTCGCTGAGCCCCAAGTCGTTCCTGACCATGATCATGGGGCTCTCGAACAAGGACATCATCGGCTCTGGCGGGTACGGCACGGTGTACAGGCTAAGCGTCGGCGAGAAGGCGGCGTTCGCGGTGAAGAAGCTGAGCCGCGGCAGCGTCGAGATGGACCGGGGGTTCGAGCGCGAGCTGGACACCATGGGCGACATCAAGCACCGCAACATCGTCCCGCTCTGCGGCTACTACGCCGCCCCGCACTTCAACCTCCTCATCTACGAGCTCATGCCCAACGGCAGCCTCGACACCATCCTCCACGGGAAGGAGGAGACGAGGAGGGCGCTGGGGTGGGAGGCGAGGCACAAGATCGCGGCGGGGGTGGCGAGGGGGCTCGCGTACCTGCACCACGACTGCATCCCGCACGTGATCCACCGCGACATCAAGTCCAGCAACATCCTCCTCGACCACAACATGGAGGCCAGGGTCTCCGACTTCGGCCTCGCCACGCTCATGAAGCCCAACCATAGCCACGTCACCACCGTCGTCGCCGGCACCTTCGGCTACCTCGCCCCAGAGTACTTCGAGACCGGGAGGGCGACGACGAAGGGCGACGTGTACAGCTACGGCGTGGTGCTGCTGGAGCTCCTCACCGGGAAGAGGCCGACGGACGAGTCGTTTCTTGAGAACGGCACGAGGCTAGTGACCTGGGTGAAGGAGACGATGGAGGAGAAGAGGGAGGAGCACGCGGTCGACAGCGCGCTGGAGTCGTCGTTCCCGGTGGAGGAGGTGAAGCTGGTGTTCAAAGTGGCAGACAAGTGCCTCGAGTCTGAGCCCTGCAACAGGCCAACCATGGCTGAAGTTGTCAAGCTGCTGGAGCTAGCCAAGAACACTACTGCATGA</cdnaseq>

Protein Sequence

<aaseq>MHITMVALYITICSILFIVSKMLISFLLYKKWARKKRIIENSLTGGKMVMFRSAAMQSLSPKSFLTMIMGLSNKDIIGSGGYGTVYRLSVGEKAAFAVKKLSRGSVEMDRGFERELDTMGDIKHRNIVPLCGYYAAPHFNLLIYELMPNGSLDTILHGKEETRRALGWEARHKIAAGVARGLAYLHHDCIPHVIHRDIKSSNILLDHNMEARVSDFGLATLMKPNHSHVTTVVAGTFGYLAPEYFETGRATTKGDVYSYGVVLLELLTGKRPTDESFLENGTRLVTWVKETMEEKREEHAVDSALESSFPVEEVKLVFKVADKCLESEPCNRPTMAEVVKLLELAKNTTA</aaseq>

Gene Sequence

<dnaseqindica>1..133#228..566#645..899#998..1131#1621..1812#ATGCATATTACCATGGTTGCACTCTACATTACAATCTGCTCTATCCTGTTCATCGTGTCCAAGATGCTCATCTCCTTCCTGCTCTACAAGAAGTGGGCTCGCAAGAAACGGATCATCGAGAACAGCCTGACAGGTTAAAAAAAAAACAGAGATTAATTCTGACTTGTTTTTCTTGCTGAATTCTTCTCTGTTGATGCGAATGATCAATTGATCATCACGTACTGTAGGTGGCAAGATGGTGATGTTCAGGTCGGCGGCGATGCAGTCGCTGAGCCCCAAGTCGTTCCTGACCATGATCATGGGGCTCTCGAACAAGGACATCATCGGCTCTGGCGGGTACGGCACGGTGTACAGGCTAAGCGTCGGCGAGAAGGCGGCGTTCGCGGTGAAGAAGCTGAGCCGCGGCAGCGTCGAGATGGACCGGGGGTTCGAGCGCGAGCTGGACACCATGGGCGACATCAAGCACCGCAACATCGTCCCGCTCTGCGGCTACTACGCCGCCCCGCACTTCAACCTCCTCATCTACGAGCTCATGCCCAACGGCAGCCTCGACACCATCCTCCACGGTACATATACACATCAGAACTCGAAGCAGCTATGGCGATTTTGTCCATGGAAATCCTGAGTTCTTGATGTGGTTGCAGGGAAGGAGGAGACGAGGAGGGCGCTGGGGTGGGAGGCGAGGCACAAGATCGCGGCGGGGGTGGCGAGGGGGCTCGCGTACCTGCACCACGACTGCATCCCGCACGTGATCCACCGCGACATCAAGTCCAGCAACATCCTCCTCGACCACAACATGGAGGCCAGGGTCTCCGACTTCGGCCTCGCCACGCTCATGAAGCCCAACCATAGCCACGTCACCACCGTCGTCGCCGGCACCTTCGGCTACCTCGCCCCAGGTCCGTCTCCGTCCGACCACCACACCTCACCTCGCCTCACCACCAGCTTCTCTGAACCACTGTCACTCATTTGATCGAACATGTTGTGTGCGTCCCAGAGTACTTCGAGACCGGGAGGGCGACGACGAAGGGCGACGTGTACAGCTACGGCGTGGTGCTGCTGGAGCTCCTCACCGGGAAGAGGCCGACGGACGAGTCGTTTCTTGAGAACGGCACGAGGCTAGTGACCTGGGTAAGATCACACAGCTCCAGATTCTATATCCGCGTTAGATTTAAAGTTTGTTTGTTAAGTTATAAAGTTTAAAATCTTATATTTCATTTAAAATGAAACAAAATGATTTTATCTAAATATTATCAACGTAATCACATACTCGAATTCATATATTTGTGAAGTTAAAAATACCCAGTTTAAAAGATTTTAGATCCAGAGCCGTGTCAAACAGAACTTAAAAGCTTTCCATCCATTTCATTTCATGTCGTACACACATCATCTACAGTGTTTTGTTGCTGAGACTGATCATTCATTAGCAGTGACCAATCATCACCAGGTGCTACAAACCACAAAGTCATGCATGATCAATGAATAATTAAATACGCGTATACTAATTATCTGTCAAACGTACTACTATTGGGCCTAATCAACGAATCATTAAAACAAGATAATAACGTGATTAATTAAGTTTGTAACATACCAACATGGGTAATCGGTGTGTACGTGCAGGTGAAGGAGACGATGGAGGAGAAGAGGGAGGAGCACGCGGTCGACAGCGCGCTGGAGTCGTCGTTCCCGGTGGAGGAGGTGAAGCTGGTGTTCAAAGTGGCAGACAAGTGCCTCGAGTCTGAGCCCTGCAACAGGCCAACCATGGCTGAAGTTGTCAAGCTGCTGGAGCTAGCCAAGAACACTACTGCATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002003