BGIOSGA002022

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Revision as of 10:30, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA002022| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA002022, complete gene.| tag = OS01G02...")
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Gene Name

BGIOSGA002022

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002022, complete gene.

LocusTag

OS01G0243200

Ensembl Transcript ID

BGIOSGA002022-TA

Ensembl Protein ID

BGIOSGA002022-PA

Length

4913

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:8551755..8556667

Sequence Coding Region

8556560..8556667,8555335..8555462),complement(8554112..8554333,8553569..8554021),complement(8553284..8553481
,8552634..8552771),complement(8551755..8552016

Genome Context

<gbrowseImage1> name=IndicaChromosome01:8551755..8556667 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:8551755..8556667 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGGCGGCGGCTTCGTCCTCCTCCTCGCCGTGGGCGGGGCGGATGGCGGCGGCGTTCGGGGCGCCGTTCCTGTGGCTCGTCTGCCTGATCTACTTCATCCAGGGTTTCAGGTCTTTTGTCTGGACAGCTGTCTCGTACCAAATGAAGGACATGATGAAACTGTCACCATCAACATCACAGTTTTTGGTCTCAGTTGCATATTTCCCTTGGAGTATAAAGCCTGTATATGGGATTTTGTCAGACTGTATTCCCATCAAGCAGAGGAAGCGTACGCCCTATTTGATCATTTCTAGCTGTCTATCTCTATTTCCGTGGCTAATCCTTGGGATGTCAGAACCTTTGAGGAGCTCAAGCAATTTTCTTACTGCTTTGCTGATAGTACAGAACTTGGGATCTGCCATGGCAGATGTTGTTATAGATGCAATGATTGCAGAAGCAGTTCGATCAGCTGGGCCAGAATTTGCTGGTGATCTCCAGTCACTATCTTGGTCATCAATGGCAGTAGGGGGGATTTTTGGGAGCTTATTGGGGGGATATGCACTGTCCAATCTCCCTATACATGTTATATACATTATTTTCTCGGCGCTTCCATTGTTTCAACTAATTTCCTGCATATTTGTTGAGGAATCTCCAAAAGGATTTGAGAGTAGAATGGATAATGCTGCACCTAAACATGTCGAGGATCAAACTATTGATGCTTCTCCCGGAAAAAGCTCTAGTGAATCATATAAATATGAAGATACTAGAAGGCGAAAAGGAGCTAGGAGAAATAATAAAAGGAAATCATTGTCCAAACGACCTGAGGACCATGACAAGAACAAGTCAACTAACTTAAGGCCATACTTGTCTCTGAAATCAGCATTCTTCAGTTTATGCACAGCATTCAAACAACCAACTATTTTACGACCTATGGCGTGGTTTTTCTTTTCGAATGTAGCAATTCCAAATATCTCAACAGTCATGTTCTACTATCAAACAGAGGTCCTACATTTGGAGGCATCCTTTCTGGGGACTGCACGTGTAATTGGGTGGTTCAGTCTAATGCTTGGCACATATATCTACAACCGCTATTTTAAACACAAGAAACTCAGGAATATTCTCATGTTTGCACATGTTGGTCTTGCCATAATTGGCGTACTGGACATTCTTTTGGTGTTGCGGTTACATGTTCACTATGGAATTACAGACAAATACATGGTCTTGTGGGGTTCTGCTTTGGCTGATGCAATTAACCAGTTCAAGATGATGCCGTTCCTCATCCTCTCTGGGCAGCTTTGCCCTCCTGGAATCGAGGGAACACTGTTCGCTCTGTTCATGTCCATCAACAACTTTGGTTCGACTTTAGGCTCATTCTTGGGAGCGGCTCTGGCGTCAGCTTTAAGCATCTCATCAGCACAATTCGACAATCTGGCGCTCGGCTTAGGTGTACAGCTGATTGGCACTCTCCTACCGGTTGGATTTTTGTTTCTGATACCAAAGGAAGTTACAGGGCTAACGTCATAG</cdnaseq>

Protein Sequence

<aaseq>MAAAAASSSSSPWAGRMAAAFGAPFLWLVCLIYFIQGFRSFVWTAVSYQMKDMMKLSPSTSQFLVSVAYFPWSIKPVYGILSDCIPIKQRKRTPYLIISSCLSLFPWLILGMSEPLRSSSNFLTALLIVQNLGSAMADVVIDAMIAEAVRSAGPEFAGDLQSLSWSSMAVGGIFGSLLGGYALSNLPIHVIYIIFSALPLFQLISCIFVEESPKGFESRMDNAAPKHVEDQTIDASPGKSSSESYKYEDTRRRKGARRNNKRKSLSKRPEDHDKNKSTNLRPYLSLKSAFFSLCTAFKQPTILRPMAWFFFSNVAIPNISTVMFYYQTEVLHLEASFLGTARVIGWFSLMLGTYIYNRYFKHKKLRNILMFAHVGLAIIGVLDILLVLRLHVHYGITDKYMVLWGSALADAINQFKMMPFLILSGQLCPPGIEGTLFALFMSINNFGSTLGSFLGAALASALSISSAQFDNLALGLGVQLIGTLLPVGFLFLIPKEVTGLTS</aaseq>

Gene Sequence

<dnaseqindica>1..108#1206..1333#2335..2556#2647..3099#3187..3384#3897..4034#4652..4913#ATGGCGGCGGCGGCGGCTTCGTCCTCCTCCTCGCCGTGGGCGGGGCGGATGGCGGCGGCGTTCGGGGCGCCGTTCCTGTGGCTCGTCTGCCTGATCTACTTCATCCAGGTTCCGCTTCCCCCTCCCCCTCTCCGCGCCCACCATTTCCTGCGACGCGATTGATCCCCGATTCTTTTGGAACGCTCTCCGTTCGTTCGATCGTTCGTTAGATAAGAGTTACGCGGCTTCCTGGGAGGAGTGACGACAGCTGTCCGAAAACCTCGCGTTTGGATCCATCAGCAAACGCGGAGCGGAGGCGAGATGCCAGACGAGTTTGAGATCGACATGTGGTAGTGTGGTACATCCGTGTGCAAGAGGCCGAACTGGTCGCTGTCTGTATAGAGATCGAGGAGTGCTTATAGGAATTTGGGTTCGGATGATTACATGGTCCTTTTGCTTCCTTCGCTTTTGTAAGGCAATCTTGGATTGTTTTTGCCAGGTCAAATCGTGCTCTCTGTGTAGGATGATATTATGGATTGCTTCTTGTGTCTTGGGTTTGCCTAAATAAGTAATTATGTCATTCATTTTAAGAATTGGAGGTCTGATGGCTGCATGAACACATTTTTCTTTTAAATATGAAATCGAAGGTAGTTCATTTGTGATCCGTTGTAAGGATTGGAACTCATTTAGGGCATTAGGAGGGTAGAGTTATTTCTATGATAGATGACTCAATATGTTTCATACTAGATTTAACTGGTTGGTTGGTGTGCAGACTTAGGTAGTGAAAGTTTCTCTAAAAAGAGCTTAATGTTGATGGAGAATCTCAGATTTGTGAAACTATGGAATGCTATACGAGTTCAGCTTCGGACTGTAATGTCTGAAAACAGCCTAGTGTGATAATTTCACAATTATAGCAAGGATTGGTGGTATGTCATATGTCTTAGCATGACATGCAATGGGATGGGGACCAAATTTGTTTATTTGTGTTGTGAGCTCATGTGCCATGCTTTGGTGATATGTCAAATGTTAGCATGTTCAATTAGTTGTAAATTCCTTGTCTCAATCAGAACTCTTCAAGATAAACTGTATTTTGTAGTAGAGCTAACTAAATATAAAGAAGGCAGTTTTGGTTTACCGAAGCTTATTTTCGCCATTAGTTGAAAGCTTAACAAAGCACTACACCTTTTACTTTGATAGATTTTAATATTTATTCTGCAATTCTTTAGGGTTTCAGGTCTTTTGTCTGGACAGCTGTCTCGTACCAAATGAAGGACATGATGAAACTGTCACCATCAACATCACAGTTTTTGGTCTCAGTTGCATATTTCCCTTGGAGTATAAAGCCTGTATATGGGTAATGTTACTTCTGTTTGCTTCTGCTGTGAACTGAAATTTAATCATGTTCCCTACAACCTAATTATGTTTTTTTTGCTACAGAGTAGTTTTTGTAATGTACTGTTTCAAACATCATATGCCTTACACAGTTACACCTTAGTTTCAGAAATCTTACATGTAATTATACTTCTTACAACAACAGAGTTTCCCTGACATGTTTACTGTGGCTTATCTCTATTGCAAGTGATTAAAGTGTAGTTGCTTACAAACAGATGGGTGCTCAATATTTCCTGAGCAAGCAACAATTATTACTTACTGCCTTTGGACAATTTGTCAATTATGACAATTATAAATATTCTTTTGTAGCATAAGAGCTAAACAATTTGTCAATTTTATATTTACTGCCTTCACACAGATTAACACGATTAATTCTAAAGGATGTTTCTGAATAGGGTATATATCAACTAATTTTGGAAATTATTTTACTTTAGTGGAAAATGGATTAATATGTGCACTGCATTTGGAGACCCGACAGTAAATGTGAAAAGGCAAAAGGAAGTGCTGCAAGCACTCCAACATCGATGGGTATTTTTTTCTGTTGGATCGCTTAGTTTTCCTCATGCATTTATACCCACTCAAATGTTTGCTGCATACTTGCTGTGGAGCTGTGCATTATGGCATTATGTAACAGATAGTCCTGTGTAACATTAAAATCACAGGTCTTAGAAATTTCTTCTATGTTGAATTGCACGGCTTGTCGGCTTCTGAGCACTGGCTGCCCATTACTGTAAAACATCTATATGCGTTTGTGTATAACTATAATGAGTTTCAGATTGTACTGTACAAAATCCAGATACTCGTTACTTACGGATGAGTCTCCTCTGACTACGTCAGAGGGACTTTGTCACTGACATGTGGGACCCACAAAGGTTGGGCCCACACGTCAGTGACCCACGTCCCTCTGACTTTACGTCAGAGGAGCGCGATCCGTTACTTACACATGCATCTTTGTGCCTGCAGGATTTTGTCAGACTGTATTCCCATCAAGCAGAGGAAGCGTACGCCCTATTTGATCATTTCTAGCTGTCTATCTCTATTTCCGTGGCTAATCCTTGGGATGTCAGAACCTTTGAGGAGCTCAAGCAATTTTCTTACTGCTTTGCTGATAGTACAGAACTTGGGATCTGCCATGGCAGATGTTGTTATAGATGCAATGATTGCAGAAGCAGTTCGATCAGCTGGGTGAGTATCTTAGTGTAATATTTTCACTGGTTAGCAACTACTATATGATTACAGATTATCTGAACTCAAAACTTGACTATATTTTTCCAGGCCAGAATTTGCTGGTGATCTCCAGTCACTATCTTGGTCATCAATGGCAGTAGGGGGGATTTTTGGGAGCTTATTGGGGGGATATGCACTGTCCAATCTCCCTATACATGTTATATACATTATTTTCTCGGCGCTTCCATTGTTTCAACTAATTTCCTGCATATTTGTTGAGGAATCTCCAAAAGGATTTGAGAGTAGAATGGATAATGCTGCACCTAAACATGTCGAGGATCAAACTATTGATGCTTCTCCCGGAAAAAGCTCTAGTGAATCATATAAATATGAAGATACTAGAAGGCGAAAAGGAGCTAGGAGAAATAATAAAAGGAAATCATTGTCCAAACGACCTGAGGACCATGACAAGAACAAGTCAACTAACTTAAGGCCATACTTGTCTCTGAAATCAGCATTCTTCAGTTTATGCACAGCATTCAAACAACCAACTATTTTACGGTAACTAATCATGTTATGATTTCATTTCCTCTTATGTTTACCCCTGTCACTGAAGAGACTAATTGATATCTTCTTTTTACCTGCCAGACCTATGGCGTGGTTTTTCTTTTCGAATGTAGCAATTCCAAATATCTCAACAGTCATGTTCTACTATCAAACAGAGGTCCTACATTTGGAGGCATCCTTTCTGGGGACTGCACGTGTAATTGGGTGGTTCAGTCTAATGCTTGGCACATATATCTACAACCGCTATTTTAAACACAAGAAACTCAGGAATATTCTCATGTAAGTTATTTTTTATATAAATGCAAAACCATATGCATTACTGGCACGTGTTAGGAAGTTGAAATGTTGACATATATATGCTTAGTGTACTCACTGAGAATTGCTATTGGATAACTTGCTAAGTTTATCGAAGGAAGAATTACCAACCTCCTCCCTAAAATCTGATACCCTCTTTGTTTGCTTTCTCCAAACAATGTGCACCTTAAATAACCCCAGGAGAGAGAAGTGTTTAAGGTGCACCAAACATATGAAAACAGAATGCATGCTGGATTATTTCCATTTGCGTGAGCATCAGAATTCATGAGGGATACATTATGCCATTGTCAGTTACCTTTTGTTCTGTGCTTTGGCCCAGTTAACAACTACGTGAGCACATGCTGTATGATCTTTTATCCTGTTACAAAATGCATATATAATTCTTTATGAGCCATTAGCTACAATACAAATATGTTTTTACTTACTTAAAGCCTTCATATTTATTACTTTTAACATTTGCTGTTCTTATCCCCCAGGTTTGCACATGTTGGTCTTGCCATAATTGGCGTACTGGACATTCTTTTGGTGTTGCGGTTACATGTTCACTATGGAATTACAGACAAATACATGGTCTTGTGGGGTTCTGCTTTGGCTGATGCAATTAACCAGTTCAAGTATATACTTTGGCCTCCATTTTTTTAATCACAATATCTATTGCTTAATTGATAACAAGCCCTTGCAGTGTTTTGAGAACCAGTTGTAGATAGGTTTCTGCTATTTGACTTGGGTCTCATTGTGCTTTGGTTAGGCACCATTCTGAAACTAGCCTATTTCCACAATATCTGGATAAGAAATTACATAACCTTAATAATATTCAGATGAACATATTAGTAAAATGGCAGGTCATGAACTTCATATGACTAACTGTGACCTCATCATTAATTGTCCTCCATCTGTGCATTTTACTTCAAATTGAGAAAAATGCTCTTTATTATCTAGTAAGATCACACCTATTACCATAAATAGTTAGTACTGGTTTAGTCACATCGAAATATTGTTGTTTTATTACCAAGTCAACACTAAAACAAACATGTGAAATTAATCTTTCAATTTAGGGCTTGTGATACAATTATGGGCATCACTATTGGTGTTTACCGTTTGTTGTCTTCAGTTTTGTAAATTACAATCTCATCTGACTCTCTTTATTTCCATCTGTTATTCTTGTGCCCCTCCTTTTATGAAAAATATAAATCAGAATACAATTTCTGAAAAGAATATTCTCATTTGTCAGGATGATGCCGTTCCTCATCCTCTCTGGGCAGCTTTGCCCTCCTGGAATCGAGGGAACACTGTTCGCTCTGTTCATGTCCATCAACAACTTTGGTTCGACTTTAGGCTCATTCTTGGGAGCGGCTCTGGCGTCAGCTTTAAGCATCTCATCAGCACAATTCGACAATCTGGCGCTCGGCTTAGGTGTACAGCTGATTGGCACTCTCCTACCGGTTGGATTTTTGTTTCTGATACCAAAGGAAGTTACAGGGCTAACGTCATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002022