BGIOSGA002060

From RiceWiki
Revision as of 10:30, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA002060| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA002060, complete gene.| tag = P0702F0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA002060

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002060, complete gene.

LocusTag

P0702F03.25

Ensembl Transcript ID

BGIOSGA002060-TA

Ensembl Protein ID

BGIOSGA002060-PA

Length

2438

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:8078774..8081211

Sequence Coding Region

8081024..8081211,8080309..8080469),complement(8080076..8080226,8079500..8079596),complement(8078774..8078857

Genome Context

<gbrowseImage1> name=IndicaChromosome01:8078774..8081211 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:8078774..8081211 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTGAAGCTGACAATGATAGCACGTGTTACTGATAACCTTCCGTTAGTGGAGGGATTAGATGATGGTCGGGATCTGAAGGATGCTGACTTCTACAAGCAGCAAGCTAAACTGTTGTTCAAGAACTTATCGAAAGGGCAACATGAAGCATCAAGGATGTCAATTGAGACTGGGCCATACCTTTTCCATTACATCATCGAGGGCCGTGTGTGCTATTTGACAATGTGTGACTGCTCTTATCCGAAGAAACTTGCTTTCCAGTACTTAGAAGATCTCAAAAATGAATTTGAGAGGGTCAATGGCAACCAAATTGAAACTGCTGCAAGACCATATGCTTTTATTAAGTTTGACACTTTCATACAGAAGACGAAGAAGTTGTATTTGGATACCAGAACCCAAAGGAACCTGGCCAAGTTGAATGATGAGCTTTATGAGGTGCACCAGATTATGACTCGCAATTTTCAAGAAGTTCTCGGTGTTGGTGAAAAACTAGATCATGATGAAAGTTTTCTGTTTGCAGAGGTGAGTGAAATGTCCAATAGGTTGATCTCTGATACTAGAATTTATGCGGAGAAGGCGAAGGATCTCAATCGTCAGGCCCTTATTCGCAAGTATGCCCCTGTTGCCATTGTGATTGGAATAGTACTGATGCTCTTTTGGGTCAAGAACAAGATATGGTGA</cdnaseq>

Protein Sequence

<aaseq>MVKLTMIARVTDNLPLVEGLDDGRDLKDADFYKQQAKLLFKNLSKGQHEASRMSIETGPYLFHYIIEGRVCYLTMCDCSYPKKLAFQYLEDLKNEFERVNGNQIETAARPYAFIKFDTFIQKTKKLYLDTRTQRNLAKLNDELYEVHQIMTRNFQEVLGVGEKLDHDESFLFAEVSEMSNRLISDTRIYAEKAKDLNRQALIRKYAPVAIVIGIVLMLFWVKNKIW</aaseq>

Gene Sequence

<dnaseqindica>1..188#743..903#986..1136#1616..1712#2355..2438#ATGGTGAAGCTGACAATGATAGCACGTGTTACTGATAACCTTCCGTTAGTGGAGGGATTAGATGATGGTCGGGATCTGAAGGATGCTGACTTCTACAAGCAGCAAGCTAAACTGTTGTTCAAGAACTTATCGAAAGGGCAACATGAAGCATCAAGGATGTCAATTGAGACTGGGCCATACCTTTTCCAGTATCCTTAATTCTTATGCTATCTGCAGATTTAGAGTTCCTGTTGAAAAAGATTATTCCCTCATGATTTTTTTTATAGGTGTTCCGTGCCAATTCCCAAAAGATTAACTCATGGTTACCCTTTTTGTGGTTTTAGGCTCAAATTTGAATTGCAGCAGCAAAGACAATGATTCCAACTAGATATGTTGGTTGATACATACACTCTGTTTAGTTTTCCTCTTTATTTTAAATTTAACTGCTCATTCCATTGACAACATATTCTTGCTGCTTATGGGGGAGTGAGTGAATTGGTGAGTAATAAGTATTGTATTAGACATTTTACTTGGTCTACCACTCTCCCAATTTTTGCATCAGCAAGAACTTGTATATTCTATGCCCTATATGCATCATCTGCCTTTCGTCATATACTTGGATGTTAATGGCACCAAGATGCCAGGAAAGTTGTGTTACTAATGCCGTATGTTAAGAAACTAAATCATTTCTTGAATTTTCATCCTGTTTGCCTTGTGAAAATCATTTGTGGTACACTTGTTGCACCTTGATTTAACCAAACAGTTACATCATCGAGGGCCGTGTGTGCTATTTGACAATGTGTGACTGCTCTTATCCGAAGAAACTTGCTTTCCAGTACTTAGAAGATCTCAAAAATGAATTTGAGAGGGTCAATGGCAACCAAATTGAAACTGCTGCAAGACCATATGCTTTTATTAAGTTTGGTATGGTTCTTACATTCATGATATTTTTCTTTATACTCATTCTCTTTATTCTACTAGTTAATGGCTTATATTTCCTGTTTAGACACTTTCATACAGAAGACGAAGAAGTTGTATTTGGATACCAGAACCCAAAGGAACCTGGCCAAGTTGAATGATGAGCTTTATGAGGTGCACCAGATTATGACTCGCAATTTTCAAGAAGTTCTCGGTGTTGGTGAAAAACTAGATCATGAGTTTGCCTTTGCACCTTATCTGTGTTATGCTGCATCGTTCATCATAGTTTTTAGCACGATGGACTTGTCAATGATTTCTGTGCATATGAGATTAACTTGAGTTTACGTATTTCCTTGAAAGATTATCAGTGAATAGGTGAGCAGTCAAATTCGCAAAATCAATTTGGTTTCAGCAGACTATCTTGCCCTAAAATTACTTGAGTTGTGTTTTCATTCCGCACTATATTGTTGTTATATTTTGTGTTTTCCTTCAATAGGCCATTTTGTTGTTTCACATCTTATTAATATTTCTTAGACTCATGCTTCCTTTTGAATTGTTTGCTCCAGTACACACCAAAGCTGTTTCTTTCTTTGTGTTGCCTGTAATCCCACGCTTTGACAGTTTTGCATGAGTGCTTCACTTTTGGCAAGACTTGTTGCAGTCTCATCTCACATTTCGTTTCATGCTTAGAGGTTTACATTTCCCAGCTGTTGCTCAGTGAAAGTTTTCTGTTTGCAGAGGTGAGTGAAATGTCCAATAGGTTGATCTCTGATACTAGAATTTATGCGGAGAAGGCGAAGGATCTCAATCGTCAGGTGTGATCCCTTATTCCCTTTACTGCATTTGCCATCTGGCAATCTCAATCTCCAAGCAACTAATATGAAATTAATATTTCAATAAATTGTGAATTAATATTGGACATGTGATAAATCGTGACTGCTGTTTATTCATGGAAGTCTTAAGGGAGTCTACTCATTTGCTTTCTAGAATTGTGACACTTTACTTTTCTCAAAATTATACATCGACAGTCCATTGTTTCCTAGAATGATCGATGGGCAATTGCAATTTATTTTCAAAAACCGTAAAATTGTATTGCTTAGTTCCAGCAACTCCACTTCAAATTTCCTTACCTTCATTGCTCTTTGAGGAGAAAAGGGGGGGAATTTGTGCTCAAGTAGTCAACAACTAAGTTGGTCCTTTTGCGATCAATTTGACACAGTAATGCTTAGAACATGTCTACATCCTTTATTTGTTAAACATATGAATTCCTGCCATACCCCCAAATTATGTTCACCAATGCACGTGAGGGATATGGGAATCTCTCATGCGTTACTATGTCCTATCTATGTCATATCACTGGTGGACTGTTAAGCATAACAAACACCTGATCTGCATTACCAGTTTACCACTTCACCTGTTTTCACGTCTGTGACAAGGCTTTCCTTCATGGTTTTCAGGCCCTTATTCGCAAGTATGCCCCTGTTGCCATTGTGATTGGAATAGTACTGATGCTCTTTTGGGTCAAGAACAAGATATGGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002060