BGIOSGA002074

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Revision as of 10:30, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA002074| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA002074, complete gene.| tag = P0485D0...")
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Gene Name

BGIOSGA002074

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002074, complete gene.

LocusTag

P0485D09.22

Ensembl Transcript ID

BGIOSGA002074-TA

Ensembl Protein ID

BGIOSGA002074-PA

Length

8017

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:7754111..7762127

Sequence Coding Region

7761796..7762127,7761134..7761491),complement(7760528..7760605,7760121..7760186),complement(7759334..7759399
,7758273..7758332),complement(7754985..7755044,7754111..7754299

Genome Context

<gbrowseImage1> name=IndicaChromosome01:7754111..7762127 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:7754111..7762127 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCTGAGTAGTGGAGGGGAGTTGAAGAGCTCCTCCTTGGTGCAGCAGATGGTGTGGGTTGGCACGGGCAACAGCAGCAGCAGCAGCATCATGGGCAGCTTGAGGCAGCTGCCTTGTTCTGAGGAGCAAGATGCAGCTTCGTCTCCAGCCTCCATGCTCTTCCTCCCCCAGCAGCTGCTGCTTCATGCATCTTCTAATTCATCGCCATGTCTGAACATTCCTGAGGTGAATCTCAGCACTGGTCTTCATCCTCTTGGGAGCTTCCATGGCGATGTGCAGCAGCAGGAGATCATCAGCGGCATGCCAGATCAGTCATGGAGACAACTGCTTCTTGGTGGATTAGTTGGAGATCACGAGAAATACGGTGTGGCCACAGCTCTCCTGTCCAAAGGGCTAGATGATGAGGCCTCTATGCCTCACGAGGCATCAGCTGCTGCTTATGATTTCTATGGACATGGCGGCGGCGCCGGCGATGAGATCCTGCAGGCATCGCCGGAGGCCAGCAGCTGCAAGTCGCAGCTGAGCCAGATGCTCCTGCAGGCGGCGGCATCCTCTCCTAGGTCATGCGTCACCACCAGCGGCCTCGGCAGCAGCATGATGGAGTTCTCCAACACCGCGGCGGTGGCGCCGGCGGCGGAGCCGGAGTTGACGAGGAAACACCATGCAGGCCAGTCAGATAACTCGTCGGAGTGTAACAGCACAGAGACAGGTTCAGCTCTTAAGAAGGCTAGGGTTCAAGCCTCTTCTTCAGCGCAATCTACCCTAAAGGTCAGGAAGGAGAGGCTTGGGGACAGAATAACAGCTCTTCACCAGATAGTTTCCCCATTTGGCAAGACTGACACTGCATCCGTACTGCAAGAGACCATTGGTTACATTAGATTCCTCCTGGGTCAAATTGAGGCTCTCAGCTACCCATACTTGGGGCAATGCTGCTCTGCGAACCCCATGCAACAGCAAACTGGAATAATGGCAGGAGAAAGGAGCACTGATGGCCTCTTCTCGGAGTTCCCAGCTGGCCAGGATGCAGAAAAGGATGGAAAGAAGCAACAGGCGAAGAAGGACGACGACCTGAGGAGCAGAGGGCTGTGCCTGGTCCCGGTCTCGTGCATGCCCCACCTGGCCGCCGACAACGACGTCGTCGTCGGCTCCGACTTCTGGGCCGGCGGCGGCGGCGGCGCGCCGCCCCTCGCCGGCATGAACCTGCGGTAG</cdnaseq>

Protein Sequence

<aaseq>MLSSGGELKSSSLVQQMVWVGTGNSSSSSIMGSLRQLPCSEEQDAASSPASMLFLPQQLLLHASSNSSPCLNIPEVNLSTGLHPLGSFHGDVQQQEIISGMPDQSWRQLLLGGLVGDHEKYGVATALLSKGLDDEASMPHEASAAAYDFYGHGGGAGDEILQASPEASSCKSQLSQMLLQAAASSPRSCVTTSGLGSSMMEFSNTAAVAPAAEPELTRKHHAGQSDNSSECNSTETGSALKKARVQASSSAQSTLKVRKERLGDRITALHQIVSPFGKTDTASVLQETIGYIRFLLGQIEALSYPYLGQCCSANPMQQQTGIMAGERSTDGLFSEFPAGQDAEKDGKKQQAKKDDDLRSRGLCLVPVSCMPHLAADNDVVVGSDFWAGGGGGAPPLAGMNLR</aaseq>

Gene Sequence

<dnaseqindica>1..332#637..994#1523..1600#1942..2007#2729..2794#3796..3855#7084..7143#7829..8017#ATGCTGAGTAGTGGAGGGGAGTTGAAGAGCTCCTCCTTGGTGCAGCAGATGGTGTGGGTTGGCACGGGCAACAGCAGCAGCAGCAGCATCATGGGCAGCTTGAGGCAGCTGCCTTGTTCTGAGGAGCAAGATGCAGCTTCGTCTCCAGCCTCCATGCTCTTCCTCCCCCAGCAGCTGCTGCTTCATGCATCTTCTAATTCATCGCCATGTCTGAACATTCCTGAGGTGAATCTCAGCACTGGTCTTCATCCTCTTGGGAGCTTCCATGGCGATGTGCAGCAGCAGGAGATCATCAGCGGCATGCCAGATCAGTCATGGAGACAACTGCTTCTGTAATTAATTACCCTCTCTCCATGCATCTCTGAATTAATTCTCTGTGGTCTAGTCATGAAATTTTAGGTGCACTAGCTAATTTGATTGTTAAAGTAATTGTAGGTTAATTACTTCAGGCGAGGAAAGTAGTTAAAGCAGTTGTCTGCTGCTTTTATTCCGCTTTTGGGTGCTTTGCTAATCAGCAATTAATCACATGTACATCTCACACATGCATGGCACTAACTTGACACTAATTGTTTCTTCCTGCATATGTGTGTATACATGTACTCCTACTTGCCTTGGGAAACTACAAATCATAAGCAGTGGTGGATTAGTTGGAGATCACGAGAAATACGGTGTGGCCACAGCTCTCCTGTCCAAAGGGCTAGATGATGAGGCCTCTATGCCTCACGAGGCATCAGCTGCTGCTTATGATTTCTATGGACATGGCGGCGGCGCCGGCGATGAGATCCTGCAGGCATCGCCGGAGGCCAGCAGCTGCAAGTCGCAGCTGAGCCAGATGCTCCTGCAGGCGGCGGCATCCTCTCCTAGGTCATGCGTCACCACCAGCGGCCTCGGCAGCAGCATGATGGAGTTCTCCAACACCGCGGCGGTGGCGCCGGCGGCGGAGCCGGAGTTGACGAGGAAACACCATGCAGGCCAGTCAGATAACTCGTCGGAGGTGAGAAAAAAAACTAATCAAGACTGTACTGTGAAAATTCATTTTGTAAATTTGTATGGAAATTTCTTCTTTCTTTCTACATTCTCACAGATGTGATCTCCTTGGTAATTGTGCAGAATGACTCAATTGAGCTTTGCTATAATTTCCCTCCTTTGGTGAAAAGCTACTACATTTTCCATGTCTCTTAGGGAAAAAAAATCACTTTTTGTTTGCTGCTTATGCATGTACATGTGCCAAACCTGATCCCATGTTTCAAACTTTTCATTTGGGATCTTGCTTTCATGATGATCCCTTGCTAAGGTTGTAGAGAGATGGATACACTTTAATTGCATCATGCCACACGGGCAAAGTTATTTATTTTTACATCCATAAAGTCAGTGTGTACTGAGCTAGCTAAGCTATATATATTTTCGACCTTATTAGCTAGCTATATATAGTTGCTCATCTTGGGACAAGGATGGAATGGCCTCATGATGGTTCTTGCTTTTGCATTGGCTTGTTTAATTTGTTGTTTCTCTGCTGCTGCAGTGTAACAGCACAGAGACAGGTTCAGCTCTTAAGAAGGCTAGGGTTCAAGCCTCTTCTTCAGCGCAATCTACCCTAAAGGTTTCTTCACGCACTCCTTTTCATATCTCACTTTATCATCTTTGGAGTATATGTTCATCTTGTGCCTAGCTAACCGCATTTTGGAATCTGTCTCGTATATACAATCTAGCCTGTAAAACAAAAGATGTAAGGGAAATTAACATTAACACTTTAAGATTCTCTGGTTTCTGATGGATTTAATTTTGTCGTAGGTCTTGTGTATGTGGTCACGTTTACATTTAGAAAGTGTACGTGTCCTCGCAGAACAAATACATCAATGGAATTGAAGATCGTAGCTTGCTACATTGCATGCATTACAATACATAATTTGTATCTCTTCTATACCAAACATTTTATTTCAGGTCAGGAAGGAGAGGCTTGGGGACAGAATAACAGCTCTTCACCAGATAGTTTCCCCATTTGGCAAGGTACTACAGCAACTTAATTAACCACACATCACTAGTTAATGTAATACTACCTCTGTCACACAATATAATTATATTCAAATTTGTCTTAAAATAATTGTCACTGTACAGTACTAATTGTTCCATATCATTTTTTATTCAGATTTATTCCTATTTTATCCTCAACTACCTTTCCACTCTTACATATACATCATTTAATGAGAAGTACCATAGTCTTTCATCTTAAACCTTAATATATGCTAAATAAATTAGGATTACAATTATTTTGAAATGGATGTAGTAGTGCACTGCATTATATTTGTAAACTGCACACAAAGAGGCTAGCCTAGCTAGCACCAAATATATCTACTACCAGTAGATTTTATACTTTGCATGTGCATGCATATATTCTAGTACCTAGGTAGTTCTAGTTCATGCACAACATGTCAAAAATATTCTTACGCATGGTTGTTTGTACATCTGAATCTCTTGTGCATGTATAGGCTTTGAACTCTGGCCTTTTCCTTTTTGCAACTGCTGTTAACACACACAATGACACAAATGTACTGCTAACACCGTAACACGTAGTACAAATTAACAAATGTACTACTGGAGTAGCATAGTGTAGTTTCTGCCCATCTCCTCGCTTTTGAGCTGCATGCAGCAGCTTCTTTCACTTTATAGAAGTCGTGTGAGTGAAAGTAAAGCAAGTCTCTGACATGTATATGTGTTCCTTCTTTTGCAGACTGACACTGCATCCGTACTGCAAGAGACCATTGGTTACATTAGATTCCTCCTGGGTCAAATTGAGGTCCAACCCCTTCTCTCACCCTGGCTAATCAATTAGCCACTCCATTTCTATCATTTCCATCCATATATATACATAGAGAGAGTTCTAATTAACTTCAGAGTGCATGTGTGTGTCTGTCTCTGATCTATAAAGCTATATATGCATATGTTAATAATTTCTGATAATTGATTATATCAAGTATGAATGATTATATATCGCAGTACCAAGCTATCCACTAATTAATGCATATGCATGTTTTCTCTGTCTTGATCAAAAAGGAAAGCTCAAAACTTTCTGTTTCAGTTTTGATTTGTCTCTTTGAATCACTAGTTTGTGCAATTAATTAACTTCTGAAGCAATGCAAGCATATTTGGATATATATATATATATGTATAAAATTACCAAATGTGAGGTTAGCAGCAGGATGTGGGGCTTACACGTATACATGTGACAGAAATTATTATGTAAATAGGTGAACCCCCCTAAAAAAGAGGACTTATATTGAAGGGTACTGCATGTGTGGGGCTGGGTGTAAGAGCACGCTGTTAAAGCTCGTTTGCATATGCATGGCATGGCTGGGTCATCGTAGCAGCTGCAGCCTGCGCATCAGGCTGAAGCCACAGCAGCAAGTTGCACACATGCATGTACCCTTCAGTAGTACATGCAACATGTGTGATGTCTTGTTCTATAGCTAGTAATTCAGATACATCAGTACTTCAGTAGTTCTAAAAAAAAACCAGTAATTCAGTAATACTGTAGATTCCCTCTTGTTGATTGCATGCATTGGCATCTCCTCTCTCTCTCTCTCTTAAATTAAGGAGGAGAAACTTGATGTCGAATAATAATAATAATAATAAAAGTATGATTGTATGTGTTAAGAATTGAACACAAAATCGATCTTGGTGTTGGAACCAAACATCCTTCATCGTTATTATTTCAGTGGCAAATGCATCTCCATAAATTTGTGACATTACAACATATATAAGCAAGTACATGACTAGTACTCGTTGTCTAATTTGTAGGCTCTCAGCTACCCATACTTGGGGCAATGCTGCTCTGCGAACCCCATGCAACAGCAAACTGTAAGTCTCTCTCTCAGTGATGCAAGTATAATATATATAGACGCACAATACTTAGGTACGTGAAAGTGTACTTGCAGTTAATTAAGAAGCTTAGTTGGGCACGTGCAATTAAAGGTTATGTGCCTTAGAAATAAGGGAAAATTGGTTCCACGCCACCGAAAGTTGTCCAGTTTTGCTTTGTACCACTGAAAGTTGCCAGTGCACTTTAATACCATCCAAAATTTGCTCCGTTAGCTTTCATACCATTTCCGTGTAAGTCAGAGTTTCTCCCGTTAAGCATATCTAAAATGCCCTTGTTTCTGGTCAACCAAGGTCAAGCCTCAAGCGCAACCAATCCATACATGGCGTTGGCCTGTATGTATGTCCGCCGCCGCGCATGATGCAACCGGAGCACGAAGCTGTGCTTGCGCCGAAGCCGCTCATCGTCCTGGCCACAGGCGTGCCCCTGTAGCTACGCGCCTCCTGCCGGAGTCGCTGGTCATGCCCTGGCCGCCCAACCCGTGCAGCCGCTCGTCGTCCATGGCACAGCCGCCGTGCAGATTTTCGCCTCTCGCCGGAGCAACTGGTCCTCCCTGGCCGGGTGGTCGCTGAAGCCGTGCAGCCGCTCGTCGTTCTAGGCCGTCGCGTGCGCCGAAGCCGTGCAGTTGCGGGCCTCCCATCGGTGCTGCTCATCGTCGCTCGCCGCTGCCCGAGCTCCTGCCGCCACTTGCCGCCGAGCTCCTCCCACGCGCCGCCGCGCGCTCGCCCGTGCTTCTCCAGCGCACAGGCGCACAGCAACGCCTGACTATCCACGACTAAAAACGAGATGCAGGGCTTAGATGTGTAGAGCAGGGGCAATATGGTCATATACCTTCATATTCTAGCAAAATATTAAAAAGGAAAAACAATATCTAACAGTAGGTACACGGTTGTGGTATAAAAGCTAACGGAGCAAAATTTGGGTGGTATTAAAGTGCACCGGCAATTTTCAGTGGTACAAAGCAAAATTGGAGAACTTTCGGTGGCGTGGAACCAATTTTCCCTAGAAATAATTGAAGTTTCGACTTTGGCTTGTTGTAGACATACGATAGGTTAATTAGCATGTATATATGGAGAAGCTTTTGCAAAGGAGGTATGCATGGTATATATGAGTAGCAAAAGTAAATAAAGCTTTCTGGTGTCCTCTACAAGAACTATACATACACGTTAACACGTACCATTTGTTTTCACTCTTTTTGAAAGGAATCCCTTTGTGACTCAAAAGAAAAAGAAAGGATATAAGCAGTACTAGTATATGATAATTATACAGTATATACAATTATCTATGAGAGAGGAGAAATTACATGCAATATATAGCTAGGAGGATATATATCAATATTACAATATATGTACTCATCAGTACTACCCAAGAAACAGAAGGAATAATTAGTGTGTTTTGGCTGTGTTTAGTTCAGCGCAAAGTTTAGATTTTAGTTAAAATTAGAGATGATGTGACTGAAAAGTTATGTGTGTATGACAGGTTGATGTGATGGAAAAGGACTGAAGTTTGGATCCAAACTTTGGATCTAAACACAGCCTTTGTCGAAACCTGAAAGGAATACACGTACTAGCTAGCTAGCACGATGCCCATGTATGCTTTTATATATTCTCACAGATAACACAACAACAAAAACCTGGTATAGAGGAACTTTTGTAGAGGCGTTTTGCAAATTGCTTCTAAGATCAGAAGTTTTATAGTGTAGAGACACTTTATAAAGGCACTTTACAAATTGTCTAGAAAACTTTTACTCTAGAGACATTTTTAGCTCAGTTTGTTAGATTTTATCTTGTAGAGGCATTTTTTCGGCACTATAAAATGCATCTAATATGTAAAGGCATTTTGTTGAGACATTTTAAACTATGTAGAGACACTTTTTAGAATGATAATGTGTACTAAAGGACTAAATATAAGTAACTAAAGGAACTAACATAAAAGTAATGATATGGAGTTGAGTTGGTTAGTGCATTTAAGATAAAAATGATTTAAGATCGTGAGTTCAAGGCTTGACAAAAGAAAGAAAACTATTTTATTCTCATTTTTGGATTGGTTTTATATGTTTGTGGTACAATTTAATGTCTCTAGAAAATGCCTCTACTATCTTATAGATACTTTATAAAATGTCCCTTCGTTTACAGAGACAATTCACCATAAGACACTTATTAGACATTTTTTAAAATGCCTCTACATTGTTGTAAAGGCATTTGAAAAGTGCCTCTACAGTACTAGAAAAATGTCTCTACAAAGTATTTTTCTTGTAGTGTAATAATCTAATATATGCACCTTTTTTACTCATTACACATATTGGACAATTATATTGATCGATCTACTGTACACAATACACATAACACGCACACATATGCTAGCGGTCTTCCAAATGCGTGCTTTAATTTTTAGAAACATACCACAGAAATACATAAAATATATTCATCATTAATTTAATTCCGCGTAAAAGCAAACAATAACTGAGTATGCCGACGGTGGTCCAGATCCCTACACGTACGGGAATGGTTTTTATATTGTGTGTAAGGCCTATAAGATTTAATATAATGTACTGTATATGTGTTAGTCCCCATTTAATTTCACAATGTTTTCTGTAGAATCTTATAACCATTAGCTAGCCCTTTATCTCGTGTGAGGTACTAAAATTAATCTACATACACATTAGGTCATATACTCTCTCCGTTTCACAATGTAAGTCATTCTAGTATTTCCCACATTCATATTAACGTTAATGAATCTAGACATATATAAATGATTTGATTCATTAACATCAATATATGAATGTGGGAAATGCTAGAATAGCTTACATTGTGAAACGAAGGAAGTAACAGTTAACAGGAAATCTCGCCAGTTAATTCACTCTCATAAATTAACAACTCTTTTCCGTTAACTTTGTACTGGTACCATAAATTATTTACAGAGCCTGCAATCAGTATACTGAACTTGAAATTATAACTAGGTAGGGACAGGTTCCAGGTATGGACCGTGATATGGAGGGGCTAACTACACACACATATATATATCTCCATCGATCTAGCTCTAGCTAGGTAGCACATGTGATTCAATGATATATGCACGTCGGGTAGCTCTAGATGATTAATTTCAGCTGAAGCTTTTTGCACGCCTGTACGTTCTGTCTCTCTCTCTCCATGCTTCAGCTGATCAATTTCGATCTCATTGCTAGCAGCTGTGTGTGTGCAAATATGCAGGGAATAATGGCAGGAGAAAGGAGCACTGATGGCCTCTTCTCGGAGTTCCCAGCTGGCCAGGTAGCATACTACTGTAGTATCTGATATATGTGCTGTGCATGCATATAAAATCTTGCTAAATTTTATTAGAGTTGAACCGATATGATGCAATGCGACCATACCATATCTTGTTTTCAGTTTATGTGTTTCTGGCATGCATGCTTTTCAGTTGCTAAACTGTAGCAGTAGTCAACACATCAATGCCCCTGCTGATAATTCATGCAGACCTGAATAAATTAAAGCAGCTTATTACTCCCTCCATTCTAAAATATAAAACACAACCACCCTTAACTTAAAGACCAAGAAATAATTATCACCTCCTAATTTATATCACCATAATAAATATAATGCATGCACCCAATAGAATTAGAGATCTTAAGAGTGAAGGATTTAAATAATAATAATAATTTAATAAAGAAGATGTGCTAATTAATTACATGCATGCATGGGCGCCTTATATTATGGAACATTTGAAAAAAAATATTTGTGTCTTATATTATGGAATGGAGGGAGTACTTAATTAGCGTCAAATTAATTAATCCATTTATGTAATTAACTAATTTACTACCAAGTATATATACATACATATAAGGTACAGTGATAAGCAAATTAATATATATACAGATCTGAATCAATTAATTAATTTGGCATGCATGAATTATATATATATATATATATTCATATATACGTGTAAATTAATATACAGGATGCAGAAAAGGATGGAAAGAAGCAACAGGCGAAGAAGGACGACGACCTGAGGAGCAGAGGGCTGTGCCTGGTCCCGGTCTCGTGCATGCCCCACCTGGCCGCCGACAACGACGTCGTCGTCGGCTCCGACTTCTGGGCCGGCGGCGGCGGCGGCGCGCCGCCCCTCGCCGGCATGAACCTGCGGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002074