BGIOSGA002085

From RiceWiki
Revision as of 10:30, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA002085| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA002085, complete gene.| tag = OsI_009...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA002085

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002085, complete gene.

LocusTag

OsI_00994

Ensembl Transcript ID

BGIOSGA002085-TA

Ensembl Protein ID

BGIOSGA002085-PA

Length

4664

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:7585628..7590291

Sequence Coding Region

7589694..7590291,7589000..7589544),complement(7588758..7588846,7587412..7587511),complement(7587307..7587336
,7586443..7586805),complement(7585796..7585867,7585628..7585672

Genome Context

<gbrowseImage1> name=IndicaChromosome01:7585628..7590291 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:7585628..7590291 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTGAGGACCGTAGTTGGATGTATAAAAGGGTAGTGAATGGATACATTTCAGATGAGTATTTGAAAGGAGTTAAGAGGTTTATGTCACACGCTGTATCAAAGTTACAAGGTCAGGCAGAGAAAAGGGTTAGATGCCCTTGTACGAAGTGCAAGAATGGACAGCTACATGACAAAAGAATAGTTCAAATGCACCTTTGCAATAAAGGATTTACTGAAAATTACCATGTGTGGAGTAGACATGGTGAAAGTGGAGCTGATACCAGTGAGACACCAGAAGGCAGTATTGACAATGAGATGAATGAAGGAGGTAATGCCTATGGAGAGTCAGGTCATATAGATGAGATGGTGTTGGATGCCGCAGGGCCTAATTTTTGTCAAAATATTGAAGAGCCTCCAAATGTTGAAGCAGTTTCATTTTTTGATATGTTAGATGCAGCAGACAAGCCATTGTGGGAGAAGTGTGGAAAACACTCTCAATTATCTGCAGTCTCTCGGTTGTTGACAATAAAATCAGACCATAATATGTCTGTAGCTTGCTTTGATGAGCTAGTCAAGGTTATGAAAGAAATGTTGCCTCCAGATGCAAATTTGCCAGGGTTAGAACTCCCTGAGAATAAGAAGGGCACTCCACAGAAGGTGCTTCGCTACCTCCCAATCATTCCACGCCTACAGAGGCTCTACATGTCACGAGGCACTGCAACACACATGACATACCACAAGGATGGGCTTGAATCAGAGAGGTGCAACAATGAAAGCAGAAAGAAAAAGTTAACTCACCCAGCAGAGAGTGAAGCATGGAAGCATATTGATTCAAAGTACCCTAATTTTGCAAAGGAGCCTCGAAATGTGCGTTTAGGGTTGTCAACTGATGGATTCACGCCATTTAATCAAACTGCAACCCCTTACTCCTGTTGGCCTGTTTTTGTTGTCCCATATAACTTGCCCCTAGCATTATGCATGAAGGCACATAATATTTTCCTTACCATGGTTATACCAGGGCCTACGCACCCTGGAAAGAACATAGATGTATTCTTCCGTCTACTAATTGATGAACTTTTGCAACTTTGGACAGAAGGAGTTGTGACATATGATCGCTCAAAAAACCAGAACTTTGTCATGCGAGCTGCCCTTATGAGGACAGGACACCCTTTTAGACATGCAAAAGACAAGTTCATCCAGAATAAGGAGGAGAAAGATGGCCCACCTATTCATCGATCATCTTCAGAAGTGAAATTTGATAGGGAGATGAAACAACAAAACAGGAACATCACTACAACTCAATTACAAGAGATGCATGAGAAAGATTTTCCAACCTGGCTTCGTGAGTTGGCTGGAAAAGATGAAACATTTAAAGAACAACTAATGCTATATTCTTCTGGTAGATATGCTGAAGCCATACGTGAATTCAACAAAATCTTGCTGTACATTCTGAAATATAAGCAGTACCATCAGAAGTCCCCGCAGTATGACCAGATCTTGAAGAAAAATGAACAGATGTATGCCTTGTTGGCAGTTTGCCTTTCCTTATGCCCGCAGCACAACCTCATTGATGAGAATGTTAGCACCCAGCTGAAAGAAAAGTATAATGACAAAATGACAAAGATGCAGAGGTTTGATGAGGAAACCTATGCTGCGTATGATGAACTGTTTTCATACGCATGCCCCAAGTTTATTACTCCATCACCTCCAGCCCTGGATCAGCCACTTACAAATTATAACCAGGATGTTATTCATGTCATGGAGTCCAAACCAATCAAGCGCCATGGTGATTACTTTTTGAGACAGATTTTAAAGTTTGAGGAAATGATTGGTGAACTGGAGAAAGTACAGTTTGACTGA</cdnaseq>

Protein Sequence

<aaseq>MAEDRSWMYKRVVNGYISDEYLKGVKRFMSHAVSKLQGQAEKRVRCPCTKCKNGQLHDKRIVQMHLCNKGFTENYHVWSRHGESGADTSETPEGSIDNEMNEGGNAYGESGHIDEMVLDAAGPNFCQNIEEPPNVEAVSFFDMLDAADKPLWEKCGKHSQLSAVSRLLTIKSDHNMSVACFDELVKVMKEMLPPDANLPGLELPENKKGTPQKVLRYLPIIPRLQRLYMSRGTATHMTYHKDGLESERCNNESRKKKLTHPAESEAWKHIDSKYPNFAKEPRNVRLGLSTDGFTPFNQTATPYSCWPVFVVPYNLPLALCMKAHNIFLTMVIPGPTHPGKNIDVFFRLLIDELLQLWTEGVVTYDRSKNQNFVMRAALMRTGHPFRHAKDKFIQNKEEKDGPPIHRSSSEVKFDREMKQQNRNITTTQLQEMHEKDFPTWLRELAGKDETFKEQLMLYSSGRYAEAIREFNKILLYILKYKQYHQKSPQYDQILKKNEQMYALLAVCLSLCPQHNLIDENVSTQLKEKYNDKMTKMQRFDEETYAAYDELFSYACPKFITPSPPALDQPLTNYNQDVIHVMESKPIKRHGDYFLRQILKFEEMIGELEKVQFD</aaseq>

Gene Sequence

<dnaseqindica>1..598#748..1292#1446..1534#2781..2880#2956..2985#3487..3849#4425..4496#4620..4664#ATGGCTGAGGACCGTAGTTGGATGTATAAAAGGGTAGTGAATGGATACATTTCAGATGAGTATTTGAAAGGAGTTAAGAGGTTTATGTCACACGCTGTATCAAAGTTACAAGGTCAGGCAGAGAAAAGGGTTAGATGCCCTTGTACGAAGTGCAAGAATGGACAGCTACATGACAAAAGAATAGTTCAAATGCACCTTTGCAATAAAGGATTTACTGAAAATTACCATGTGTGGAGTAGACATGGTGAAAGTGGAGCTGATACCAGTGAGACACCAGAAGGCAGTATTGACAATGAGATGAATGAAGGAGGTAATGCCTATGGAGAGTCAGGTCATATAGATGAGATGGTGTTGGATGCCGCAGGGCCTAATTTTTGTCAAAATATTGAAGAGCCTCCAAATGTTGAAGCAGTTTCATTTTTTGATATGTTAGATGCAGCAGACAAGCCATTGTGGGAGAAGTGTGGAAAACACTCTCAATTATCTGCAGTCTCTCGGTTGTTGACAATAAAATCAGACCATAATATGTCTGTAGCTTGCTTTGATGAGCTAGTCAAGGTTATGAAAGAAATGTTGCCTCCAGATGCAAATTTGCCAGGTAGTTTTTACAAATGCAAGAAAGTCATCGAAGCTTTAGGTATGCCTGTCCAAAAGATTGATGTTTGTAAGAATGATTGCATGTTATACTATAAGGAGCATGCTAACAAAAGGAATGTATAACATGTAATGAGCCTCGTTATATTGAAGGGTTAGAACTCCCTGAGAATAAGAAGGGCACTCCACAGAAGGTGCTTCGCTACCTCCCAATCATTCCACGCCTACAGAGGCTCTACATGTCACGAGGCACTGCAACACACATGACATACCACAAGGATGGGCTTGAATCAGAGAGGTGCAACAATGAAAGCAGAAAGAAAAAGTTAACTCACCCAGCAGAGAGTGAAGCATGGAAGCATATTGATTCAAAGTACCCTAATTTTGCAAAGGAGCCTCGAAATGTGCGTTTAGGGTTGTCAACTGATGGATTCACGCCATTTAATCAAACTGCAACCCCTTACTCCTGTTGGCCTGTTTTTGTTGTCCCATATAACTTGCCCCTAGCATTATGCATGAAGGCACATAATATTTTCCTTACCATGGTTATACCAGGGCCTACGCACCCTGGAAAGAACATAGATGTATTCTTCCGTCTACTAATTGATGAACTTTTGCAACTTTGGACAGAAGGAGTTGTGACATATGATCGCTCAAAAAACCAGAACTTTGTCATGCGAGCTGCCCTTATGAGGACAGTAAGTGACTTTCTTGCATATGGGATGTTGTGCGGCTAGAGCACACACGGGAAATTAGCTTGTCCAATTTTCATGGAAGACACAAAGTCATTTTGGCTAAAAGTTGGAGGCAAGCCATGTTGGTTTGATTGTTATAGGCGTTTCCTACCAAAGGGACACCCTTTTAGACATGCAAAAGACAAGTTCATCCAGAATAAGGAGGAGAAAGATGGCCCACCTATTCATCGATCATCTTCAGAAGTGTATGATTGTGTTAAATCTCTCCCTCAAATTACATTTGGTACCAAGGCAGGAAATCAAGAGATTGAGGGTTTTGGAAAGGAGCATAATTGGGTAAAAAGATCTATCTTTTGGGAGTTGCCTTACTGGCGTGAGTTGTTAGTACGGCACAACCTTGATGTGATGCACATTGAAAAGAATGTGTTTGACAATATATGGAATACTTTGATGGATATCCCAAAGAGGACTAAAGATAATGTCAAGGCTCGATTTGATTTAGCCAATATATGCAATCGCAAAGAACTTCATATGCAACAAAAATCTATAGGTCGATGGGTGAAACCAAAAGCTTGTTATAGTGTAGATAAGGCACAGAAGAAATTGGTACTGCAATGGGTTAAGAATCTTAAATTCCCTGATGGTTATGCATCAAATTTAGCACGGGGTGTTGATATTAATCGAGGCAAGATCATAGGAATGAAGAGTCATGATTGCCATGTCTTCATGGAAAGGTTGCTACCTGTGGCATTTCGTGATTTCCTCCCCAAGCACATGTGGAAGTGTTTAGCAGAACTGAGCTACTTCTTTAGGCAACTATGTGCAAAAGAGGTGGATATAGAACAAATGAAGCACCTACAAAAGGAAGTGCCAGTCATTGTGTGTAAACTTGAACAGATTTTTCCTCCTGGATTTTTTGATTGTATGGAACATTTGGTGGTGCATCTAGCTTATGAAGCTTTAATTGGAGGGCCTGTAGCTTACCGCTGGATGTATGTATTTGAAAGGTATGTTTCTTTGGTTAAGTACTAAAGTGTGAATTTGTATATTAATTTCATAATTATGTTTTCTACTCAATTCATAGGGAGTTACATGAGGCTCGCAAGAAGGTTCGAAACAAAGCACATGTCGAAGGTTCAATTGTAGAGGGCTATAGAGTACAGGAGGTCTCTAATTTTATTTCTATGTACTTTGCTGATCATGTGCGAACAAACCACACTCGCGTCCCTAGACATGATGATGGTGGTTTCAGAGCACCTACTGACTGGTTGTCTATATTCTCTATCCCATATCGCACTCTTGGAAAGAGCACATCACGTAACTTATCAAGAGAAGAATGGCAGGCTGCTAGGGTATATGTATTACTCAATTGTGCAGAAGTTGACAAATATGTCTTGTAAGTATATATTATTCTGTTTTCCTATTTTATTACTTGGGCTCTATTTTTGTGAATATGACATATTACATTTATGTTATTGCAATAAATGTCAGGAAATTTGATAGGGAGATGAAACAACAAAACAGGAACATCACTACAACTCAATTACAAGAGATGCATGAGAAAGATTTTCCAACCTGGCTTCGTGAGTTGGTAAGAATACATGATGTAATATCTGATGGATTATTATTTATTTTAATGCATGATTCATGAAAATTGATTCTACAGGCTGGAAAAGATGAAACATTTAAAGAACAAGTAAGGGCTCTTTCCATTGGGCCCCGATACATGGTTAAGTGTTATAAGGGATGTGATGTTCAGGGGTTTCATTTTCGTACACAACCATATGAACAAAAGAAATCATCGAGGACAACGACAAATAGTGGAGTTTGTGTGTCAGCAAATTGGTTTGATAACCAAGGGCCTGACTACTATGGCACTATTTAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTCATTGACTGCCTTGGAATCAATGGATACTTCAATCTACAGTGCCATGTTAGACGCAGAGTTTTTTGCTCTTCTATGTTCAAATTGTACTTAAATCACATGAAATGCGTCCTAGGATATAAACATTATTTCCAGTAAAATTAGATTGAGTCATGTTGTACAGCCACACCTAGGATATAAGCATTCTTTTCAGTAAAACCCCATTTTATGAATTTATTTTTTAATTCACTTTCTTGAAATTGCCCAAGATGGTTGTTTTAGCTAATGCTATATTCTTCTGGTAGATATGCTGAAGCCATACGTGAATTCAACAAAATCTTGCTGTACATTCTGAAATATAAGCAGTACCATCAGAAGTCCCCGCAGTATGACCAGATCTTGAAGAAAAATGAACAGATGTATGCCTTGTTGGCAGTTTGCCTTTCCTTATGCCCGCAGCACAACCTCATTGATGAGAATGTTAGCACCCAGCTGAAAGAAAAGTATAATGACAAAATGACAAAGATGCAGAGGTTTGATGAGGAAACCTATGCTGCGTATGATGAACTGTTTTCATACGCATGCCCCAAGTTTATTACTCCATCACCTCCAGCCCTGGATCAGCCACTTACAAATTATAACCAGGTAATGCTTTTGGTGTTAAATAATAATGTATTTTTCTGATTCATAGATACGTCCTATCTAGTTGTTACTGCAGTCAATCTAGAAATTTGTCTCCTGGTGTTTGGTTCATGACTGCAGCTACTGGATGTTGTCACTCCTTGAGCCCTTTTGCCTTCTCTTCATGGACTTTATTGTGTTTGCCAAAGTTCTGACAGCTAATTTACTCTTTCCCAAAAACAAATTAATAAAATCAAATAGCCCTTTAGTTACTTTTCCTTGTTTCAGACTATTGCCCATTCATTTTAGGGTGAAATTGTTCTTCCCTGTTAAACAAAGTAAATTCTCCTGCAGTAAACATTCCGGTGGTTTAATTCCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCAAGTTGATATTTAGTTCTTGAATATTTGGGTTTGGCTTTTATGTGTGATCCTCTAATCCTTTTGCTTACTCAGAGGTAGCTGTAGTTAAGGCACTATTGGCATATGCCATTATGCATCTAGTTTGACACTATAATTAACTGCCAATAATCTATGTGCAACCATGCAGGATGTTATTCATGTCATGGAGTCCAAACCAATCAAGCGCCATGGTGATTACTTTTTGAGACAGATTTTAAAGGTATCCATACCACCGCTTGGCATAACCTTGCTGTGAACCACCACTACCATTTGCATTTCACTATTTCTTCTGAAAATAATGTGTATGTTGCTATACCTTCAAATCTTTACTATTATCCTGCAGTTTGAGGAAATGATTGGTGAACTGGAGAAAGTACAGTTTGACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002085