BGIOSGA002109

From RiceWiki
Revision as of 10:31, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA002109| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA002109, complete gene.| tag = OsI_009...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA002109

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002109, complete gene.

LocusTag

OsI_00935

Ensembl Transcript ID

BGIOSGA002109-TA

Ensembl Protein ID

BGIOSGA002109-PA

Length

4940

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:7084891..7089830

Sequence Coding Region

7089517..7089830,7089319..7089420),complement(7088300..7089102,7087229..7087278),complement(7084891..7085448

Genome Context

<gbrowseImage1> name=IndicaChromosome01:7084891..7089830 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:7084891..7089830 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTTGGAGAAGAAGGCGACGAGGAGTACTAGGGTGGATGGGGTGAGCGGCGAGGCGGTGATCGAGGAGTTCGAGCGGGTGACGCGCGACGCGGCCAATGTGCAGCGGGAGACGCTGCGGCGGATCCTCGCCGAGAACGGCGGCGTCGAGTACCTCCGGGGGCTGGGCCTCGCCGGCGCCACCGACCCGGCCACCTTCCGCGCGCGCGTCCCGCTCGCCACCCACGCCGACCTCGAGCCCTACATTGACCGCATCGCCGACGGCGACGCCTCCCCCGTCCTCACCGCCAAGCCCGCCACCTCCATCTCCCTCAGCTCCGGCACGACGCAGGGGAAGCGCAAGTACCTGCTATTCAACGAGGAGCTCGTCAAGTCCACGATGCAGATATACCGGATCTCCTACGCGTTCCGGAACAGGGAGTTTCCGGTGGAGAACGGGAAGGCGCTGCAGTTCATCTACAGCAGCAGGGAGACGAGGACGAAGGGGGGGCTTACGGCGACGACGGCGACGACGAACGTGTACCGGAGCGAGGAGTTCAAGGCGACGATGAGGGACATCCAGTCGCAGTGCTGCAGCCCCGACGAGGTGATCTTCGGCCCGGACTTCGCGCAGTCGCTCTACTGCCACCTCCTCGCCGGCCTCCTCGCCGCCGGCGACGTGCAGATCGTGTCCGCCACCTTCGCCCACAGCGTCGTCCTCGCGTTCCAGACGTTCGAGCGCGCCTGGGAGGACCTCTGCGCCGACATCCGCCGCGGCGAGGTGTCGCCGTCGCGGGTCACCTCGCCGGCCGTCCGCCGCGCCATGGCGGCGCTCCTCGCCGCGCCCAACCCGGGCCTCGCCGACGAGGTCGCCCGCAAGTGCGCCGCCCTGAGCAACTGGTACGGCGTCATCCCGGCGCTGTGGCCCAACGCCAGGTACGTGTACGGCATCATGACGGGGTCCATGGAGCACTACGTCAAGAAGCTCCGCCACTACGCCGGCGGCCTGCCGCTCGTCGCCGCCGAGTACGGCGCCTCCGAGGGGTGGGTCGGCGCCAACGTCGAGCCCGGGACGCCGCCGGAGCGCGCCACCTTCACCGTGCTCCCCGACATCGCCTACTTCGAGTTCATCCCCCTCAAGCCCGTCGCCGGCGACGGCGGCTACGCCGAGGCGGAGCCCGTCGGCCTCACGGAGGTCGCCGCCGGCGAGCTCTACGAGGTCGTCATGACCACCTTCGCAGGTCATCAAACAACTATTAAAGATAAGATTTTGACCCTGGCTCAGGCACTGGGGCTTTACCGGTATCGGCTGGGGGACGTGGTGAAGGTGGCAGGGTTCTACAACGCGACGCCCAAGCTCAAGTTCGTGTGCAGGAGGAACCTGATGCTGTCGATCAACATCGACAAGAACAGCGAGCAGGACCTGCAGCTGGCGGTGGACGCGGCGGCGAGGGCGGTGCTCGCCGGCGAGAAGCTGGAGGTGGTGGACTACACCAGCCACGCCGACGTGTCGTCGGACCCGGGCCACTACGTCGTCTTCCTGGAGCTCAACGCCGCCGACCCCGCCGCCGTCGACGGCGACGTGATGCAGGCCTGCTGCGACGAGCTGGACAGGGCGTTCGCCGACGCCGGCTACGTCGGGTCGAGGAAGTCCGGCGCCATCGCCCCGCTCGAGCTCCGCGTGCTGCAGCGTGGAACCTTCCAGAAGGTTCTCCGCCACTACCTCTCCCTCGGCGCCCCCGTCAGCCAGTTCAAGTCCCCCCGCTGCGTCTCCCGCTCCAACTCCGGCGTCCTCCAGATCCTCGCCGGCTGCACCGTCAACGTCTTCTTCAGCTCCGCCTACGACTGA</cdnaseq>

Protein Sequence

<aaseq>MLEKKATRSTRVDGVSGEAVIEEFERVTRDAANVQRETLRRILAENGGVEYLRGLGLAGATDPATFRARVPLATHADLEPYIDRIADGDASPVLTAKPATSISLSSGTTQGKRKYLLFNEELVKSTMQIYRISYAFRNREFPVENGKALQFIYSSRETRTKGGLTATTATTNVYRSEEFKATMRDIQSQCCSPDEVIFGPDFAQSLYCHLLAGLLAAGDVQIVSATFAHSVVLAFQTFERAWEDLCADIRRGEVSPSRVTSPAVRRAMAALLAAPNPGLADEVARKCAALSNWYGVIPALWPNARYVYGIMTGSMEHYVKKLRHYAGGLPLVAAEYGASEGWVGANVEPGTPPERATFTVLPDIAYFEFIPLKPVAGDGGYAEAEPVGLTEVAAGELYEVVMTTFAGHQTTIKDKILTLAQALGLYRYRLGDVVKVAGFYNATPKLKFVCRRNLMLSINIDKNSEQDLQLAVDAAARAVLAGEKLEVVDYTSHADVSSDPGHYVVFLELNAADPAAVDGDVMQACCDELDRAFADAGYVGSRKSGAIAPLELRVLQRGTFQKVLRHYLSLGAPVSQFKSPRCVSRSNSGVLQILAGCTVNVFFSSAYD</aaseq>

Gene Sequence

<dnaseqindica>1..314#411..512#729..1531#2553..2602#4383..4940#ATGTTGGAGAAGAAGGCGACGAGGAGTACTAGGGTGGATGGGGTGAGCGGCGAGGCGGTGATCGAGGAGTTCGAGCGGGTGACGCGCGACGCGGCCAATGTGCAGCGGGAGACGCTGCGGCGGATCCTCGCCGAGAACGGCGGCGTCGAGTACCTCCGGGGGCTGGGCCTCGCCGGCGCCACCGACCCGGCCACCTTCCGCGCGCGCGTCCCGCTCGCCACCCACGCCGACCTCGAGCCCTACATTGACCGCATCGCCGACGGCGACGCCTCCCCCGTCCTCACCGCCAAGCCCGCCACCTCCATCTCCCTCAGGTCAGTGTCCCCGCCCGCCGCCGCTTGCTGCTCTTTGACCTCGATCGAGAACGTCGCTGACCATGGCGGGGATCACCTCACCGCCGGTGCATGCAGCTCCGGCACGACGCAGGGGAAGCGCAAGTACCTGCTATTCAACGAGGAGCTCGTCAAGTCCACGATGCAGATATACCGGATCTCCTACGCGTTCCGGAACAGGTACGCCATCGCCGCCGGCGAGCTCGATCGCTGTCTCTTTCGCCATCCTCCCCGGCGTCGCTGTCCGCCATGGACAGCCTGCCTCTCTCTCTCTCTCTCTCCCTTTTTCTTTCATACGTACGACACGTACTAACAACACAGTGCTCGATCTCGATCGATCGATCAGTGACAGTGAGGTCTCAATTCTTGGAAATTAATGGCGGTGAAATTGATCAGGGAGTTTCCGGTGGAGAACGGGAAGGCGCTGCAGTTCATCTACAGCAGCAGGGAGACGAGGACGAAGGGGGGGCTTACGGCGACGACGGCGACGACGAACGTGTACCGGAGCGAGGAGTTCAAGGCGACGATGAGGGACATCCAGTCGCAGTGCTGCAGCCCCGACGAGGTGATCTTCGGCCCGGACTTCGCGCAGTCGCTCTACTGCCACCTCCTCGCCGGCCTCCTCGCCGCCGGCGACGTGCAGATCGTGTCCGCCACCTTCGCCCACAGCGTCGTCCTCGCGTTCCAGACGTTCGAGCGCGCCTGGGAGGACCTCTGCGCCGACATCCGCCGCGGCGAGGTGTCGCCGTCGCGGGTCACCTCGCCGGCCGTCCGCCGCGCCATGGCGGCGCTCCTCGCCGCGCCCAACCCGGGCCTCGCCGACGAGGTCGCCCGCAAGTGCGCCGCCCTGAGCAACTGGTACGGCGTCATCCCGGCGCTGTGGCCCAACGCCAGGTACGTGTACGGCATCATGACGGGGTCCATGGAGCACTACGTCAAGAAGCTCCGCCACTACGCCGGCGGCCTGCCGCTCGTCGCCGCCGAGTACGGCGCCTCCGAGGGGTGGGTCGGCGCCAACGTCGAGCCCGGGACGCCGCCGGAGCGCGCCACCTTCACCGTGCTCCCCGACATCGCCTACTTCGAGTTCATCCCCCTCAAGCCCGTCGCCGGCGACGGCGGCTACGCCGAGGCGGAGCCCGTCGGCCTCACGGAGGTCGCCGCCGGCGAGCTCTACGAGGTCGTCATGACCACCTTCGCAGGTAACACACGTTCGTCCTCATCATGCATGACGTTGGTTGCTTATTACTACTTGCAGTCCAAAAAATGGATGAATATCTGTCGCTTTTGCATATCTGTTCATGAAACCAGTCGAAATTTGGTCACTTGCACATTTGCAGCTACTGGCCATATAATGTTTGCCCAAAAATAATTGTCCTTCTTTTTATGACACTACAAACATTAGCATTTTTGGGACCACATGTGTACCGAACATGTTTGGGAAAATCCTAGGGTGGCAATTTGTTTTTTTGGTAAATATTGCAACAGATATGCATGAAACGAGGACTAAGAATGGTTTTATTAATTATCCGAGTAAATATAAGCAACAATGGAGCAGTTCCATTTGCTTTGCAGTATAAATTAAAAAGGCAAAAAAAATAAATCAGTGACAGATCAAAGTTGTTCTGTACAAATGCTAGAAACAACTAAAAGTTGTATACAATTTCTTCAGATAAACAGCTTTACATTCTGTAGACAGAGACATGCTTCACCACATCATTTAGTGTAATATAATTAGCTTATGACAGTTTACCTGCACCTGTTGCATGCCCGTTGCTTTCTTATCCGTAACTGGAGAGGCAGGTTTGCAAACACACAGTCATTAGCAGCCTCTGCTTTGTCCTGACAGCAATGCATATCGGTGGTCACAGTGACAGCACAGAGAACTTTCGCCTCATTGCTTTTTTTCCCCTTTGTTGACTTGTTTTTTCCCCTTTGTTGACTTGAGCTCTGACAGTCTGATTGTCCAAAGGTGGGGCATTGACTTCATTTGGCCTTCCAAACCCTTGGGCTAAATGGTCACTCTGGTCTTGAAAACTTGGATCTTTTTTTATTTTTTGTTGTCAAAGAATTGTATTGTAGATGTGCCTTTCTGTTTGGTAGATTTAAAGGACCATGACCAATGGGAAAACTTCAGGAGATCTGAAGTTGCCATTGCCTTTTCTGTTTGGTTGTCTGTAGATTAGTTTTAGACTTTTAGTCTTTGGTTCGGAAGATGATTAGGTCATCAAACAACTATTAAAGATAAGATTTTGACCCTGGCTCAGGCACTGGTTGGTTGAGGACTTTTGAGTTGCTTGGAGACAAGGGTATGAACATACCTTGGAGATGTAGGGATTTGGATGAATTAATTAATTAACCCAAGTGGCCCTTCACTTGCATAATTTTCTCAAACATATTATGTGTGTGCACACCTGACTGAAGATCAATGAAAACTAGCCAATGGAATGGACAAAACATTGAAAAAAAGAAGCTAATTTGCTATGATAGGTTAATTCTTTTATACATGTAGATCAATAATTGCTGTGTTGCTTTCACAAGGTAACTTGTACTGAACACTTATCTGAAACTTACAGAGTTACTCCTACACCATCAGCCTTAGTTCCGACTCTGTTGAATGCTTCAAATCAAGTCCAAGGACGACTCATTCAATTCATCCTGATAAAACAAAACATCTTAATTATTCATATGACTTTGAGAACTAATAGTACTTGTACGACTCCTACCACCTCTTCTAGTAGCTTTAATTTACAAATGGGAGCAATGATGATAGTTGTAGACCATGGATCAGGTGTGAAACTGACAGACCAAAATTAAACAATCCCTTCGAAACAGAAAAAGACCTCCTAATGACGATCTGTCCTATGACCTTTGGTACGTTTGCTCTTGTCTCTTATCAGCAGCTCGGAATCCGTACTCAACTCTCCCCAGCCTTAACCGTAGTTAACCTTGACCATTAGCCAAGTCTCATGCATTCACATCCAAATGCAACAGCTGCAACTATCAAACGAACGAATGAACAAACAAACAAACACTAACACTGGCCAGGCCATCTCTTTCTGGTAGTACATTCCAGTATCTGAATATTCAGGCTTAATTTTCTTACCTCTTCACCAACAAGGTAATTGATCAGCTCAGCGTTTTCACCCCATTAATTTTTCATTATTCAAATTGATAGCTTATTAGCTAGGGTTTGTCGTCGCGTTTAGACTCATGACTTCCATGGATGGCTGTATGGGCGCCACAAACGAAAGAGGAGACGACGACGAAGAATTCTTCTGTGGTCATGTCAGGTAATCGGATAAGAATCGGTGACAGGCTACCCGGCACAGCCCAAGTGGGAAGCAGGTACATATGCAAGAACATGTACAAGCTCAGCTCAGCTACCTAGCTAGAGCAGAGATGGGGGCCAATCTATTATGTCTAGTATACTTTTCTTCTTCCTTGGCATGATTGATTTAATTATGTTTATATATATGCATGCTACCCTACGTACCATCTTAATCATATGATGTTTGAAGCTTAGCTACCTTAATTTGTCCCTGTTTACGTACTTTGTTGAGTGTATCCTTGATCTGTTCAGGATTATTCAGGAATCTGAACAAATAATAATGATGTCTTAATCTGTGAAAGTTGGTCTTAAACTCTTAATTAGCGAATGCAATGGTACGCATTATTGGATTATTCATGATATGATTTTAAGTGGATTCTCGGTTAAGATTATACTCCCTTCAGTCAGAAACATTTTGATGTTTTGGGAGTACTAGAATTAGTACTCTGAACTTCAAGTATTATTGACTAGAGGGAGTATGCATAATTAACACGCACACAACCTCTTTGAAAGGGGAATGCTGGAATACTATAGGACGGTATCTCGTTCGGAAGGGATGATACCCTATCAAATGATACGTACCAGGTATCAGATGAAACCTTTAAGGTATCATTATGTTCGAACGGAATACCGTCCTGTAGCGCATTTCATCGATGATATCACCGAGGAACGTCTTTTTTACCATAGTTCTGACATTTTTGTATGTATGTATGTATATGCAGGGGCTTTACCGGTATCGGCTGGGGGACGTGGTGAAGGTGGCAGGGTTCTACAACGCGACGCCCAAGCTCAAGTTCGTGTGCAGGAGGAACCTGATGCTGTCGATCAACATCGACAAGAACAGCGAGCAGGACCTGCAGCTGGCGGTGGACGCGGCGGCGAGGGCGGTGCTCGCCGGCGAGAAGCTGGAGGTGGTGGACTACACCAGCCACGCCGACGTGTCGTCGGACCCGGGCCACTACGTCGTCTTCCTGGAGCTCAACGCCGCCGACCCCGCCGCCGTCGACGGCGACGTGATGCAGGCCTGCTGCGACGAGCTGGACAGGGCGTTCGCCGACGCCGGCTACGTCGGGTCGAGGAAGTCCGGCGCCATCGCCCCGCTCGAGCTCCGCGTGCTGCAGCGTGGAACCTTCCAGAAGGTTCTCCGCCACTACCTCTCCCTCGGCGCCCCCGTCAGCCAGTTCAAGTCCCCCCGCTGCGTCTCCCGCTCCAACTCCGGCGTCCTCCAGATCCTCGCCGGCTGCACCGTCAACGTCTTCTTCAGCTCCGCCTACGACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002109