BGIOSGA002127

From RiceWiki
Revision as of 10:31, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA002127| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA002127, complete gene.| tag = P0515G0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA002127

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002127, complete gene.

LocusTag

P0515G01.4

Ensembl Transcript ID

BGIOSGA002127-TA

Ensembl Protein ID

BGIOSGA002127-PA

Length

2067

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:6689629..6691695

Sequence Coding Region

6691597..6691695,6691293..6691514),complement(6691123..6691190,6690441..6690608),complement(6689629..6689788

Genome Context

<gbrowseImage1> name=IndicaChromosome01:6689629..6691695 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:6689629..6691695 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGGCCGCGGCTGGTGCTCTTCGGCGACTCCATCACCGAGCTCTCCTTCGCCGACGGCGGCTGGGGCGCCGCCCTCGCCGACCACTTCGCCCGCAAGGCCGACGTGGTGCTGCGCGGGTTCAGCGGCTACAACACGCGGTGGGCGCTGCGGGTGCTGGCGAGGGCGATGGAGGGCGCGGCCGCCGCCGCGGACCCGGCTGCCGTCACGGTGTTCTTCGGCGCCAACGACGCGTCGCTGCCGGAACGGAAGCAGGGGCACCAGCACGTGCCGCTCGACGAGTACCAGAGCAACCTCCGCGCCATCTGCGCCTACTTCAAGGAGCAATGGCCCTCCACTAAAATTATACTCATCACGCCTCCACCAATCTATGAACCGGCGAGAATCCGGGACATGTATGGAGAAGATGACCCTTCAAAACTACCTGAAAGAACCAATGAAGCTGCTGGCACTTATGCACAGGCATGCCTGACAGTTGCTAAAGAATTGAACCATCCAGTCATAGACATCTGGACAAAGATGCAGCAATTTCCTGACTGGCAAACATCTGCATTATGTGATGGACTGCACTTCACCCCATTGGGAAACAAAATTTTGTTTGACTGTGTGCTGGAGACACTGGAAAGCATTGGTTTCAGCCAAGGGAGTCTTCAACCAGATCTTCCTCTCTTCCATGATATCGACCCAAAGGACCCTTTGAAAGCCTTTGAAATCTGA</cdnaseq>

Protein Sequence

<aaseq>MRPRLVLFGDSITELSFADGGWGAALADHFARKADVVLRGFSGYNTRWALRVLARAMEGAAAAADPAAVTVFFGANDASLPERKQGHQHVPLDEYQSNLRAICAYFKEQWPSTKIILITPPPIYEPARIRDMYGEDDPSKLPERTNEAAGTYAQACLTVAKELNHPVIDIWTKMQQFPDWQTSALCDGLHFTPLGNKILFDCVLETLESIGFSQGSLQPDLPLFHDIDPKDPLKAFEI</aaseq>

Gene Sequence

<dnaseqindica>1..99#182..403#506..573#1088..1255#1908..2067#ATGAGGCCGCGGCTGGTGCTCTTCGGCGACTCCATCACCGAGCTCTCCTTCGCCGACGGCGGCTGGGGCGCCGCCCTCGCCGACCACTTCGCCCGCAAGGTACGCCACCCTTCCCTCCTCCTCGCGATCCGGCCGCCGTCCCATCCCCGCGACACGCGTACGTCACCGTTTCTTTGGATAGGCCGACGTGGTGCTGCGCGGGTTCAGCGGCTACAACACGCGGTGGGCGCTGCGGGTGCTGGCGAGGGCGATGGAGGGCGCGGCCGCCGCCGCGGACCCGGCTGCCGTCACGGTGTTCTTCGGCGCCAACGACGCGTCGCTGCCGGAACGGAAGCAGGGGCACCAGCACGTGCCGCTCGACGAGTACCAGAGCAACCTCCGCGCCATCTGCGCCTACTTCAAGGTTCTGCTTGGATTGAAATTGATTGGTTTTCCCCCGGCTTGAACTGATTGATGCTTCTGCTTCGTCGTTGCTTAACTATGGTTTGGTTTGGATCTTTCGCAGGAGCAATGGCCCTCCACTAAAATTATACTCATCACGCCTCCACCAATCTATGAACCGGCGAGAATCCGGTAAGGATGGAAGGAATAACCAGCAGATGGTTTTAATCGGTTTTATGTTGCTATATGGTATTCTTGTTGCATTTGCCTGTTAATGACATGATGGTGTATTTGCCATCCTCTGTTTATTTTATCCATGGCATTAATTCATGCTAATTGTCTTAGAACGACAACAAAGGAGTCAACCAGGAAATTAGTCCGATAAAAATTACTCTGTTCAAGAATTTAAAACCGAGTTCATAATGCACCAGCACAGTACAGGGTATGCTTATGTTTGATTTATGAACATGTATCCATAAGCAGATTTGACCAACATGTTGTCTGTATTTCTCATGTAAAAGTATGTGTATTCTAAATTATGGGATTATTTCATATTTGGTTTATCGGGTATATATCCAGTCACCACTTGGTGGCCCTTAGCTTGATCTGAAGATCCTTTTTTCAAGTTACAAATAAAACAGTGTGCTTTTTTTTTTTGTAAAGAGGATTTGCAAACTGTACTTATTGTCCCTGTCTTTCCTTGCAGGGACATGTATGGAGAAGATGACCCTTCAAAACTACCTGAAAGAACCAATGAAGCTGCTGGCACTTATGCACAGGCATGCCTGACAGTTGCTAAAGAATTGAACCATCCAGTCATAGACATCTGGACAAAGATGCAGCAATTTCCTGACTGGCAAACATCTGCATTATGGTATGGATCTATTTCAAGTGACCTTATACCTAAACTTGATGTATGGATGGGCTTAATAACTGTTAAGGGCTTCCATTTATGCTACCAGTATCCTACTTTGCAGATTGCATAAACAATCTGATCAAACATAATGGTTCTGTACTTCTATTGAGAGTATAAAAGTTCTATAAAAAATGTAGATTCATGGTAAACTGTTCTGCCTAAAGATTCTTGCTGCTTACTAAGATAGGGAATCACCTTCCTGTTATCACTCTGTCTAAAGACTCTATAGTTAAGATATTTAACTGAACAAGACGAACCTGACACTCTCCATAACAGTCATTCAGTTTTCTTGCTTCTGAATTGTGCTTAGATCAAAAGATTCTGTACTCTGTAGTGAAAATTGTTGGAACAAACTTACGAAGTGCGTTTTGCTTAGTTTTCATCTTCTCTTCTGATCTGTATATAGTAAAATGGTACTCCATGCTATGTGGACCAGAACATAGTAGTATTTTGTTTTGAACTTGGGTATATATCTGTGTACATGTATTTCTTGCTGAGGAAATGCGTTATGCCGTGATGTAGCTGTGAATAAACAATTGTAGAGTTTACTGCTTAGAATGTTTTTTTTCCTGATGACAATCGCTATACAACTTTCTTTTATATCATGCAGTGATGGACTGCACTTCACCCCATTGGGAAACAAAATTTTGTTTGACTGTGTGCTGGAGACACTGGAAAGCATTGGTTTCAGCCAAGGGAGTCTTCAACCAGATCTTCCTCTCTTCCATGATATCGACCCAAAGGACCCTTTGAAAGCCTTTGAAATCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002127