BGIOSGA002140

From RiceWiki
Revision as of 10:31, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA002140| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA002140, complete gene.| tag = P0466B1...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA002140

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002140, complete gene.

LocusTag

P0466B10.32

Ensembl Transcript ID

BGIOSGA002140-TA

Ensembl Protein ID

BGIOSGA002140-PA

Length

1515

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:6500739..6502253

Sequence Coding Region

6500739..6502253

Genome Context

<gbrowseImage1> name=IndicaChromosome01:6500739..6502253 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:6500739..6502253 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTGGACTCGCTGCTATACGGGCTCCTAGACCTGCGCATGGCGGCGCCATTGCTTGCAGCTGCCGTGGCGTTGTACGTCCTTGTCGAGCAGCTGTCCTACCACCGCAAGAAAGGGTCCCTGCCAGGGCCGCCGCTCGTCGTGCCGTTCATCGGCAGCGCCACGCACATGATCCGCGACCCGACCGGGTTCTGGGAAATGCAGGCTGCTCGCGCTAGAAAGTCCGGCGTTGGGTTCACCGCCGACTTCCTGGCCGGCAAGTTCACGATCTTCATCCGCGACTCGGAGTTGTCCAACCGCGTCTTCGCGAACGTCCGCCCCGACGCCTTCTTCGTCATCGGCCACCCGTTCGGCAAGAAGCTCTTCGGCGACCACAACCTCATCTACCTGTTCGGCGACGACCACAAGGACCTGCGCCGCCGTATGGCGACCAACTTCACGCCGCGCGCGCTCTCCACCTACGCCGCCATCCAGCAGCGCGGCATCGTCTCCCACCTCCGGCGGTGGCTCGACCGGAGCGCCGCCAACGGCGGCAAGGCCGAGCCGATACGGGTGCCCTGCCGCGACATGAACCTCGAGACCTCGCAGACGGTGTTCGCGGGGCCGTACCTCACCGAGGAGGCGAGGGAGAGGTTCAAGAGCGACTACAATCTCTTCAATGTAGGCCTCTTGGCCTTCCCCGTTGACCTGCCGGGGCTCGCGTTCCGGCGTGCGAGGCAAGCCGTGGCGAGGCTGGTGCGCATGCTCCGCGATTGCGCGAGGGAGAGCAAGGCGCGGATGCGCGCCGGCGGTGAGCCAGAGTGCCTCGTGGACTACTGGATGCAGGAGACGGTGCGGGAGATCGACGAGGCCAAGGCGGCGGGGCTGCCGCCGCCGGCGCACATCTCCGACGACGAGGAGATCGGGGGCTTCCTCTTCGACTTCCTCTTCGCGGCGCAGGACGCGTCCACCTCCTCCCTCTGCTGGGCCGTGTCCGCGCTGGACTCCCACCCGGACGTGCTCGCCCGCGTGCGCGCCGAGGTGGCCTCCCTCTGGTCCCCCGACTCCGGCGAGCCCATCACCGCCGATAAGATCGCCGAAATGAAGTACACAAAGGCTGTTGCTCGCGAGGTGGTCCGGCACCGCCCACCGGCGACGCTGATGCCACACATCGCCTTGCAGAACTTCCAGCTGACGGAATCGTACACGATCCCTAAGGGCACCCTGGTGCTCCCGTCGATGTACGAGTCGTCGTTTCAGGGGTTCCATGACCCCGACGCGTTCGACCCGGAGCGCTTCTTCTCGGAGGCGCGGAGGGAGGACGTGGTGTACAAGCGCAACTTCCTCGCGTTCGGCGCCGGCCCGCACCAGTGCGTCGGTCAGCGGTACGCGCTCAACCACCTCGTCATCTTCATGGCGCTCTTCGTCTCCCTCGTCGACTTCCGGCGTGAGAGGACGGAGGGCTGCGACGTGCCGGTGTACATGCCGACCATGGTGCCGAGGGACGGCTGCGTCGTCTACCTCAAGCAGCGCTGA</cdnaseq>

Protein Sequence

<aaseq>MVDSLLYGLLDLRMAAPLLAAAVALYVLVEQLSYHRKKGSLPGPPLVVPFIGSATHMIRDPTGFWEMQAARARKSGVGFTADFLAGKFTIFIRDSELSNRVFANVRPDAFFVIGHPFGKKLFGDHNLIYLFGDDHKDLRRRMATNFTPRALSTYAAIQQRGIVSHLRRWLDRSAANGGKAEPIRVPCRDMNLETSQTVFAGPYLTEEARERFKSDYNLFNVGLLAFPVDLPGLAFRRARQAVARLVRMLRDCARESKARMRAGGEPECLVDYWMQETVREIDEAKAAGLPPPAHISDDEEIGGFLFDFLFAAQDASTSSLCWAVSALDSHPDVLARVRAEVASLWSPDSGEPITADKIAEMKYTKAVAREVVRHRPPATLMPHIALQNFQLTESYTIPKGTLVLPSMYESSFQGFHDPDAFDPERFFSEARREDVVYKRNFLAFGAGPHQCVGQRYALNHLVIFMALFVSLVDFRRERTEGCDVPVYMPTMVPRDGCVVYLKQR</aaseq>

Gene Sequence

<dnaseqindica>1..1515#ATGGTGGACTCGCTGCTATACGGGCTCCTAGACCTGCGCATGGCGGCGCCATTGCTTGCAGCTGCCGTGGCGTTGTACGTCCTTGTCGAGCAGCTGTCCTACCACCGCAAGAAAGGGTCCCTGCCAGGGCCGCCGCTCGTCGTGCCGTTCATCGGCAGCGCCACGCACATGATCCGCGACCCGACCGGGTTCTGGGAAATGCAGGCTGCTCGCGCTAGAAAGTCCGGCGTTGGGTTCACCGCCGACTTCCTGGCCGGCAAGTTCACGATCTTCATCCGCGACTCGGAGTTGTCCAACCGCGTCTTCGCGAACGTCCGCCCCGACGCCTTCTTCGTCATCGGCCACCCGTTCGGCAAGAAGCTCTTCGGCGACCACAACCTCATCTACCTGTTCGGCGACGACCACAAGGACCTGCGCCGCCGTATGGCGACCAACTTCACGCCGCGCGCGCTCTCCACCTACGCCGCCATCCAGCAGCGCGGCATCGTCTCCCACCTCCGGCGGTGGCTCGACCGGAGCGCCGCCAACGGCGGCAAGGCCGAGCCGATACGGGTGCCCTGCCGCGACATGAACCTCGAGACCTCGCAGACGGTGTTCGCGGGGCCGTACCTCACCGAGGAGGCGAGGGAGAGGTTCAAGAGCGACTACAATCTCTTCAATGTAGGCCTCTTGGCCTTCCCCGTTGACCTGCCGGGGCTCGCGTTCCGGCGTGCGAGGCAAGCCGTGGCGAGGCTGGTGCGCATGCTCCGCGATTGCGCGAGGGAGAGCAAGGCGCGGATGCGCGCCGGCGGTGAGCCAGAGTGCCTCGTGGACTACTGGATGCAGGAGACGGTGCGGGAGATCGACGAGGCCAAGGCGGCGGGGCTGCCGCCGCCGGCGCACATCTCCGACGACGAGGAGATCGGGGGCTTCCTCTTCGACTTCCTCTTCGCGGCGCAGGACGCGTCCACCTCCTCCCTCTGCTGGGCCGTGTCCGCGCTGGACTCCCACCCGGACGTGCTCGCCCGCGTGCGCGCCGAGGTGGCCTCCCTCTGGTCCCCCGACTCCGGCGAGCCCATCACCGCCGATAAGATCGCCGAAATGAAGTACACAAAGGCTGTTGCTCGCGAGGTGGTCCGGCACCGCCCACCGGCGACGCTGATGCCACACATCGCCTTGCAGAACTTCCAGCTGACGGAATCGTACACGATCCCTAAGGGCACCCTGGTGCTCCCGTCGATGTACGAGTCGTCGTTTCAGGGGTTCCATGACCCCGACGCGTTCGACCCGGAGCGCTTCTTCTCGGAGGCGCGGAGGGAGGACGTGGTGTACAAGCGCAACTTCCTCGCGTTCGGCGCCGGCCCGCACCAGTGCGTCGGTCAGCGGTACGCGCTCAACCACCTCGTCATCTTCATGGCGCTCTTCGTCTCCCTCGTCGACTTCCGGCGTGAGAGGACGGAGGGCTGCGACGTGCCGGTGTACATGCCGACCATGGTGCCGAGGGACGGCTGCGTCGTCTACCTCAAGCAGCGCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002140