BGIOSGA002146

From RiceWiki
Revision as of 10:31, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA002146| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA002146, complete gene.| tag = OsI_008...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA002146

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002146, complete gene.

LocusTag

OsI_00858

Ensembl Transcript ID

BGIOSGA002146-TA

Ensembl Protein ID

BGIOSGA002146-PA

Length

2124

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:6448589..6450712

Sequence Coding Region

6450421..6450712,6449940..6450206),complement(6449183..6449764,6448589..6448920

Genome Context

<gbrowseImage1> name=IndicaChromosome01:6448589..6450712 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:6448589..6450712 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGTGGGTGCGGATGCGGGTGCGGGTGCGGAGCCCGCCGGTGATGCAGTCGAAGCTGCTCTGCCTCTCCCTGCTCTACCTCCTCACCACGCTCCCGCTTGCGCTCTACGTCTCCTTCTCCGACCCGGCCTCCGCCGCCTCGCGCTGCCTCGTCTTCCTCCCCTTCCGTTCCTCCGCTCCTTCGTCGGCGGCGTCGGCGGCGCTGTTCGAGTACCCGCGCGAGTACGGCGAGCACAAGCACGCGATCCCCGCCACGCGCGCGCTCTGCTCCGACCCCGCCGTCTTCTCAGACTATAAGACGGTCTTAGAAGAGATCAACAAACTCTGCCGCAACCTCTCGGCGTCTCCTTATGCAAAACCAGCATTGCGGTACCAGAATGGGAGGAGGAACTCGTTCGCGGGAAATTTGTCCACCGTTGAGCGGAGATCCTTCTTCAACCACACTGATAGCGCAGTTGAAATTCCATGTGGGTTCTTCAAGGAATTCCCCGTCAGAGAATCTGGTGATTTCTTTGGCCAATTCGCATTTTTCATAGAGGAGAAAATTCTTGTGGCACACAGATTGGCCATGGAGAAGTGCAATGGCGCGGTGGTGGCGTCGGCGATCTTCAACGACCACGACAAGATCCGGCAGCCCAAGGGGCTCGGCTCCGAGACGCTCCGGACGGTGTGCTTCTTCATGTTCATCGACGATGCCACCCACAGAGTCCTCGCGAGCCACAACATCCTAGCCGGCGAGCGCGGCGAGGCCGGCACGATCGGCGCGTGGCGCGTGGCGAGGCTTGTCGCCGGCGCCGGCGGCGACCACCGGCTCCCCTACGAGAACCCGGCCATGAATGGCGTGATCGTGAAGTACCTCCTGCACAGGCTGTTCCCGAACGCGAGGTTCAGCGTCTGGGTGGACGCCAAGATGCAGCTCACCGTCGACCCGCTGCTGCTGGTGCACTCGTTCGTCGCCGGGAAGGGTGCGGACATGGCGGTCTCCAAGCACCCGTTCAACCTCCACACCATGGAGGAGGCGATCGCGACGGCGCGGTGGCGCAAGTGGGGCGACGTGGATGCCATCAGGGCGCAGATGGAGACGTACTGCCGGAACGGCCTGCAGCCATGGTCCCCTATCAAGCTTCCATATCCGTCAGATGTGCCGGACACGGCGATCATCATCAGGAGGCACGGCCTCGCCAGTGATCTCTTCTCCTGCCTCCTTTTCAACGAGCTGGAGGCGTTCAACCCGCGCGACCAGCTCGCCTTCGCCTATGTCCGGGACCAGATGAGCCCCAAGGTGATCATGAACATGTTCGACGTCGAGGTGTTCGAGCACATCGCTGTCGAGTACCGGCACAACCTAAAGCGTGGCAATGGCGGGGCAGGAGGGAAGCAGGGCATCACCAGGATGGCATCCTCGGGAGACATCGCAGGGAGCAGCTGCGAGAGATACCTTCTGAAGATGTGGGGGGAGACTACTGAATAA</cdnaseq>

Protein Sequence

<aaseq>MGWVRMRVRVRSPPVMQSKLLCLSLLYLLTTLPLALYVSFSDPASAASRCLVFLPFRSSAPSSAASAALFEYPREYGEHKHAIPATRALCSDPAVFSDYKTVLEEINKLCRNLSASPYAKPALRYQNGRRNSFAGNLSTVERRSFFNHTDSAVEIPCGFFKEFPVRESGDFFGQFAFFIEEKILVAHRLAMEKCNGAVVASAIFNDHDKIRQPKGLGSETLRTVCFFMFIDDATHRVLASHNILAGERGEAGTIGAWRVARLVAGAGGDHRLPYENPAMNGVIVKYLLHRLFPNARFSVWVDAKMQLTVDPLLLVHSFVAGKGADMAVSKHPFNLHTMEEAIATARWRKWGDVDAIRAQMETYCRNGLQPWSPIKLPYPSDVPDTAIIIRRHGLASDLFSCLLFNELEAFNPRDQLAFAYVRDQMSPKVIMNMFDVEVFEHIAVEYRHNLKRGNGGAGGKQGITRMASSGDIAGSSCERYLLKMWGETTE</aaseq>

Gene Sequence

<dnaseqindica>1..292#507..773#949..1530#1793..2124#ATGGGGTGGGTGCGGATGCGGGTGCGGGTGCGGAGCCCGCCGGTGATGCAGTCGAAGCTGCTCTGCCTCTCCCTGCTCTACCTCCTCACCACGCTCCCGCTTGCGCTCTACGTCTCCTTCTCCGACCCGGCCTCCGCCGCCTCGCGCTGCCTCGTCTTCCTCCCCTTCCGTTCCTCCGCTCCTTCGTCGGCGGCGTCGGCGGCGCTGTTCGAGTACCCGCGCGAGTACGGCGAGCACAAGCACGCGATCCCCGCCACGCGCGCGCTCTGCTCCGACCCCGCCGTCTTCTCAGGTCGATCCCTCTCCGTCCGGGAAGGACGTAACGGATGTCTCTGCTTCTCTTTTCATGATCCATGGTCGCATGCAAACGCAACAAATGCGGACGATCCTGTTTCTCATCTCTGTTTTTCTTGTTTTCGTTCAGTGTTTTCTGATCAGTTTTTTGAATTTCTGGAATTTGAATGCCATAAGAAATTCACAAGTGCTATATTTTACTCTTGGAACAGACTATAAGACGGTCTTAGAAGAGATCAACAAACTCTGCCGCAACCTCTCGGCGTCTCCTTATGCAAAACCAGCATTGCGGTACCAGAATGGGAGGAGGAACTCGTTCGCGGGAAATTTGTCCACCGTTGAGCGGAGATCCTTCTTCAACCACACTGATAGCGCAGTTGAAATTCCATGTGGGTTCTTCAAGGAATTCCCCGTCAGAGAATCTGGTGATTTCTTTGGCCAATTCGCATTTTTCATAGAGGAGAAAATTCTTGTGGCACGTGAGCATGACTATCATTGAGCTGAAAACTCATTATAATCCCTTGAGTTGCAAGCCAGATGTTTTTATGTGTTCTTTTGCGTATATGCAACTCAAGCCTTTTGTGGTGCAATAATCAAGAAACACTGCTACACACTTCGATGTTATCATCTTTGTGAAGACGTTGTTGGTTTTAGACAGATTGGCCATGGAGAAGTGCAATGGCGCGGTGGTGGCGTCGGCGATCTTCAACGACCACGACAAGATCCGGCAGCCCAAGGGGCTCGGCTCCGAGACGCTCCGGACGGTGTGCTTCTTCATGTTCATCGACGATGCCACCCACAGAGTCCTCGCGAGCCACAACATCCTAGCCGGCGAGCGCGGCGAGGCCGGCACGATCGGCGCGTGGCGCGTGGCGAGGCTTGTCGCCGGCGCCGGCGGCGACCACCGGCTCCCCTACGAGAACCCGGCCATGAATGGCGTGATCGTGAAGTACCTCCTGCACAGGCTGTTCCCGAACGCGAGGTTCAGCGTCTGGGTGGACGCCAAGATGCAGCTCACCGTCGACCCGCTGCTGCTGGTGCACTCGTTCGTCGCCGGGAAGGGTGCGGACATGGCGGTCTCCAAGCACCCGTTCAACCTCCACACCATGGAGGAGGCGATCGCGACGGCGCGGTGGCGCAAGTGGGGCGACGTGGATGCCATCAGGGCGCAGATGGAGACGTACTGCCGGAACGGCCTGCAGCCATGGTCCCCTATCAAGCTTCCATATCCGTCAGGTATTGCAATATAGCACAGAAAGAATTTGCTTTCTCGCCTTCAGTTTTTGGTTTCTTGCTTGATCAAACAAACAAACAGCTATCGTACGAAGCTACTGAAACTGACATCTGAACAATGCCAATAACATGAACAAAATGCGATTAGCCAGCATGTCAACATTGCTGACACATGATATGATAGTGTGTCACAACTCACGAACAATGTAACGCCATCCAAGCAATGATCAGGGATACGGGATCACGAGATTTTGTTGTGCTGCAGATGTGCCGGACACGGCGATCATCATCAGGAGGCACGGCCTCGCCAGTGATCTCTTCTCCTGCCTCCTTTTCAACGAGCTGGAGGCGTTCAACCCGCGCGACCAGCTCGCCTTCGCCTATGTCCGGGACCAGATGAGCCCCAAGGTGATCATGAACATGTTCGACGTCGAGGTGTTCGAGCACATCGCTGTCGAGTACCGGCACAACCTAAAGCGTGGCAATGGCGGGGCAGGAGGGAAGCAGGGCATCACCAGGATGGCATCCTCGGGAGACATCGCAGGGAGCAGCTGCGAGAGATACCTTCTGAAGATGTGGGGGGAGACTACTGAATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002146