BGIOSGA002150

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Revision as of 10:31, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA002150| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA002150, complete gene.| tag = OsI_008...")
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Gene Name

BGIOSGA002150

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002150, complete gene.

LocusTag

OsI_00851

Ensembl Transcript ID

BGIOSGA002150-TA

Ensembl Protein ID

BGIOSGA002150-PA

Length

6380

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:6389528..6395907

Sequence Coding Region

6395815..6395907,6395428..6395456),complement(6394177..6394360,6393971..6394071),complement(6393161..6393244
,6393003..6393051),complement(6391386..6391505,6389528..6391231

Genome Context

<gbrowseImage1> name=IndicaChromosome01:6389528..6395907 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:6389528..6395907 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACGACCCAAGCTAAAGAAAAATGCCCACTTTGCACAGAGGAGATGGATTTGACAGATAAACAGCTGAAGCCGTGTAAATGTGGATATGAGGACATCATCATTAAAGATCTAACATCAATATTAAAGGAACTTTGTGCTGACAAATCAAACTTTCAAAAAGAACAAGCCAAGTCTCAAAAGCAGAAACCAGTAAAAGTTCAGTCAGGAGTGACAGAAGAATCAATAGACCCATATAGTGTTCGTGTGATTCAACGCAGGCTTGTTTATATTGTTGGGATGCCTTCTGAATTCGCGAGTGACAAGGTGCTGAGGCAGCATAATTTTCTTGGGCAATATGGAAAAATAGAAAGTATTATTATCGACAATATTGGAGCTAACCAACAGATTCCTGACTCTGGCCGTGTATATGTTACCTTTTCAAGGGAGGAAGAAGCTTTTCGGTGCATTGAGGTAGTTAATGGTTTCATCTTGGATGGTAGACCTCTAAAGGCAACTTTTGGCGTTACAAGATATTGTCATGTATGGCTAAGCAATAAGATAAGGCTTCAGCATTTGTTGGGAATGGATACAAAGGGTCTCCGTTCAGGAAATACTTTGCCCCCTCCTGGTGACTGTGTATCAAGAACTACCGTTTGTAATGGAAACTCCAAAGATAAGACCTGCAGCGATGATTATGGAGTACTACACAATCACGGTAACAAGAATCTTGGCACGCTGCCAGCTACAACTCTTCAAGAAGAGAAGAAACGTAATAGCACACCTAATAATCAGCAAGGATTGTCTGCCTCCGTGTCTCAGGAATTACCACCGCTTGGACCAAAGGTTCACCATCTCAATGATCAGTTGGCTTCCTGTGGTGATAAGCCCGAAGCATCTGTGCAGTCAGTAAATGGCAATTTGAATTCTAAGCAAGTAACTGCAGCAGGAAATGGAACGGTGGGCACCTTATCAGCAAAACAATATGTTAATGTAGTTTCACAAGGATCAAGTGGTTCAGGTCGCAGATTTACTGTACTTACTAGGCAGACGGCTTCTAGTGATACTCGGTCTAAAGCAACAGGACAAGTCGGTAATGCCTCTTCAGATTCCCAGAAGCTTACTTCGGCAAACAATGAGCACAGTGACAGAATTAAAATTTCTAGGAGTGATAATGTAAAGTTAGTTTCGCAGAGACCAGAGGAACCTTCCCAAATGCTAGCTAATCATTTGACCGGAGCAATTGATAAGACCCACGTTGATACAGATGAAAAGAATGCTCGCTCAGATATAAATGAAAAAACAGTTTGTGGTATTCAGATGCAGCTTAAAGAAAGCACTGCAGCACACAGATCAACTGTGCTGCAGAGTTTGAGGGACAATCCTATGTCCAATAATCTTCCAACATTGGATGTCAAATCTCAGATATCAGTTGTGCCAGACAAGCCTTCAGATTCACAGTCAGCATCTAAAACTCAATTGCAGCCCTCAAATCATAAAAAAACTGCTGTTTGTAGTTCAGATACAGCCAATGCAAGTGATGCATGTGGCATCGCTAATAATCAGGTGCTGTTCCCTGGTGGTAAACATCAAACTTCATCACAAGGGGAGGATCACAGCTTGTACAAGAGGGATAAGAGTCAGTCAGGAGATCAACTTTCATCTCAGCATCCTGGGAATGTTTTCTCACCAAGGCTACTCACTTCACTGTCATCCATTGATATAACTGCCAAGGAAAATAAAGGAATTAAAAGGCACGTTTGTCCTCCTGGATTTGAGGAGCTTCACAGGCCGTCTGATTCTGACAAGATTACATCAGTAAGCTCCCCAACTTCTTCTATTATGTGCTCTGGACCTGATACCCTGGTACAAGATTCATGCTCTGCTAAAGATCAGCCAGACTTCATTAGCTGGGTTTCAGAGTGCCTAGAAGATGGTGGAGAAACTACACAAAGTAATAGGAGCATACCTTCTACTCTCAGTTCCACAGATGCCACTTGGAGATACATGCAGTATCCTGCCTCCTGTTTTTCTGGTGCATCAAATCACTTTCTAGTATCACCGTACCCTAGAGGATTGTCACAGCACACGGTGGGTCGGATTGAAAATACCATGAATTGCTGCTGTTCCCATCCATCTGTCAGTGGCATAGCAAATCACAAGCCTGAATACTGGAGTGGAAGTGACCATAGCTACATGTCTACTGGGGGATATGATGTATTCAGTCAAAGTGCAACATTAGGCATGATAGCTGGTATGGTAGGCACATCGCCCCAACAACCTTCGCCACCTGTTCATTACAATGACTGGACCACGGGAAGTGCTGATTCAGATTTGAAGAGTCCACAGGTTGATCATACATACCCCATGTACTCGCTGTTCTGA</cdnaseq>

Protein Sequence

<aaseq>MTTQAKEKCPLCTEEMDLTDKQLKPCKCGYEDIIIKDLTSILKELCADKSNFQKEQAKSQKQKPVKVQSGVTEESIDPYSVRVIQRRLVYIVGMPSEFASDKVLRQHNFLGQYGKIESIIIDNIGANQQIPDSGRVYVTFSREEEAFRCIEVVNGFILDGRPLKATFGVTRYCHVWLSNKIRLQHLLGMDTKGLRSGNTLPPPGDCVSRTTVCNGNSKDKTCSDDYGVLHNHGNKNLGTLPATTLQEEKKRNSTPNNQQGLSASVSQELPPLGPKVHHLNDQLASCGDKPEASVQSVNGNLNSKQVTAAGNGTVGTLSAKQYVNVVSQGSSGSGRRFTVLTRQTASSDTRSKATGQVGNASSDSQKLTSANNEHSDRIKISRSDNVKLVSQRPEEPSQMLANHLTGAIDKTHVDTDEKNARSDINEKTVCGIQMQLKESTAAHRSTVLQSLRDNPMSNNLPTLDVKSQISVVPDKPSDSQSASKTQLQPSNHKKTAVCSSDTANASDACGIANNQVLFPGGKHQTSSQGEDHSLYKRDKSQSGDQLSSQHPGNVFSPRLLTSLSSIDITAKENKGIKRHVCPPGFEELHRPSDSDKITSVSSPTSSIMCSGPDTLVQDSCSAKDQPDFISWVSECLEDGGETTQSNRSIPSTLSSTDATWRYMQYPASCFSGASNHFLVSPYPRGLSQHTVGRIENTMNCCCSHPSVSGIANHKPEYWSGSDHSYMSTGGYDVFSQSATLGMIAGMVGTSPQQPSPPVHYNDWTTGSADSDLKSPQVDHTYPMYSLF</aaseq>

Gene Sequence

<dnaseqindica>1..93#452..480#1548..1731#1837..1937#2664..2747#2857..2905#4403..4522#4677..6380#ATGACGACCCAAGCTAAAGAAAAATGCCCACTTTGCACAGAGGAGATGGATTTGACAGATAAACAGCTGAAGCCGTGTAAATGTGGATATGAGGTGAAATTCAATGCTTGAGCACCAATTTGTAGTTCATCTGATGTGCTTCCTTTTTTCCCTTGGATATCATGCTTTATATGCTTGTGATAAATACCTAACGGCGAGAGACATCTTTAGTCTGTTGTTCTTCAAATGCTTAAAGAGTCGAAGTTCATTTGCTTGTAGATTATTTATTTTGGTGAAATTGAGCAACTCTTATCTCTGGATGCATGTCCTTTCTTCAATTAGAGGTTTTTTTTTTTTCTGAATGAAAGGTTAATGACCTTGAAGTATTAGTGCAGTTTGTTTCAGACATTATATATCATAGTAAAATTGTAAAACACAATGTAATCGCGCTAACATTTTTAGTTTCTTTCAGGACATCATCATTAAAGATCTAACATCAATGTAAAAGTACCTAAGATTTTTTTCAGTTTCTTTCAGCATATCATCATTCAGTTAGGTTATTAGCCAAAAGTCCTTAGTAACTGTCAAAACTATAGAGATGCTGCACGCAACATGAAATATACGAATTGTATCCACTTGCTTCCTTTAAAAATAACATAGTGGTAGTGGTGAATCTGCCATTACCACCTCCACGCTACATTTCATACAAATTGCTCTCTGAATTTCTTTAAAAGTGCAGAATAGACCTTCCATGTTGTTTGACTTTCTAAAAGCGCAATTAACATGGAAAGATCTTACATGACCATATTTTCATGTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAGTATTTATGAATTAATTTTACAACTAGTGTGTGTAACACTGTTAAATGCCCCTTTAAAAACACAAGTGAAGGACATGTTAACTGACATTTATTTGACATGTAGGATTGAATTTAATTTTTAGCAAATGCACAGGCATTTGGGTAATGCAACTATCAAATGCAATAAATTTCAGATAGTTATTGTCCATATTTTGGTAAATTAAATGCATGGTCTGTTAATTTTGTATATTGCCTTATGTATTTGGTGTATTTGCATGCTGCAGATTCTATAAAATATGCACATTTGTGGCTTGGTTAATTTCTTCTGTTGTGAATCTTATGTATTAACAAAATATGTGTGTTTATAATTTTCTGGCAGATTTGTCTTTGGTGTTGGCATCAGATAATGGAAATGGATCAGAAAGAAGAATGTGGCGGGAGATGCCCCGCGTGTCGTTCTATCTACAACAAGGACAGGATCATGGGAACAAGCATCAGCAACCAAATGCACGTGCATTAACTTATCCTACTATTTCCTGTCCACTTCTGCTGTTATATGCAATTTGTATCTCGTAGAAAAGAAACTGATTTGGAATCCTTCTTATGATAGTGTATATAGGATGGCTTCTTAATTTTTCTAATTTATGGAGCTTACCAGTGAAGTAATTACTGTGCCCTTTCTAATGTTAGATTAAAGGAACTTTGTGCTGACAAATCAAACTTTCAAAAAGAACAAGCCAAGTCTCAAAAGCAGAAACCAGTAAAAGTTCAGTCAGGAGTGACAGAAGAATCAATAGACCCATATAGTGTTCGTGTGATTCAACGCAGGCTTGTTTATATTGTTGGGATGCCTTCTGAATTCGCGAGTGACAAGGTAAGAATGTTTAGTCCTGTGAAAGCTTTAATATAAGATTATAACTATGATTCCCATATCTATCGGTTAGATGAAACAAATGCCAACCAAACCCTGTTCATGCAGGTGCTGAGGCAGCATAATTTTCTTGGGCAATATGGAAAAATAGAAAGTATTATTATCGACAATATTGGAGCTAACCAACAGATTCCTGACTCTGGCCGTGTGTAAGTTTTTGGTAGCTAAATGCATTTATGCTTTTTACTTATTATATTATTTTTTTGAGCAAACTACAGTTACGGAGCCCCCACGTATATAATTTTCAGAAGTTATGATTTTTACTTATTTATATTAGTGCGGGAACAAGTGAAACAGGTCCAGTTCTTGAATTAGATACCTTTCTTGGACATCAATTAAACCTAGAAATCATCCACATTGCCACAATATGTGGTGGGCACCTTTGCATGAAGTGCCTGCATTATTCAACTTTTATCCCATATACCTTGCAGATTTCATTGTCCAAGCCACAATCCACCTCTATATGTACTGCTGCAATATGGCCCAATAGCATATGCTGTGGATCTCTAGTTTTTGGTTGCCCTATTTTAATTGTAGCTACTGCTACTATATTAACCCCAGCAGATCTAACTGTCAATAAACTGAATGACTATACTCCCTCCATCCCAAAGTATTAAGGCATGGTCAAACTTGGCATGGTCTCGGAAACTAGTCTTCCGACTTTTAATTTCGCATATACTACAGTGCTTGTAGCAACAAAATCATAGCCATAGGAATTATATTCAAATGTTGATCCAATGATATTATTTTCATTATATAAAATTTAATTTACATTGGCCTAATCGTGCACGTCTTATATTTTGGGATGGAGAGAGTAATTTTTTTTTGGTTGAGATGTTGTTATTTTATGTAATCCTTTGGTTCTATCCCTATAGATATGTTACCTTTTCAAGGGAGGAAGAAGCTTTTCGGTGCATTGAGGTAGTTAATGGTTTCATCTTGGATGGTAGACCTCTAAAGTAAGTCTGGTCACAGAACACACGACAGTTTGACTTGAAGGAACAACCATCTCTGTCTTGCCTTCTATGCAGCGTATGCCTTACCTTTTTTTATATGCTGATCATGTAGGGCAACTTTTGGCGTTACAAGATATTGTCATGTATGGCTAAGCAATAAGGTGGTTTATACAAATTTAATACTTCAGTTCCTGCAAATTCTTATTTTGTCTGCTTTGTACTTAACTTCCCTGTGTTGTGTCCCAGGTTTGCCGAAAGCCAATCTGTTCGTACGTGCATCAAAAAGCCCCACCAGAAGATATTTGTACGAAGGACGATGTCGCTGTGTACTGTGCAAGGTGCATATTGCTAATGCATTTTTTGATAGGCATGTGGAATTTGATTTATTTCATGGTCATTTGTCATTTGTCAAAATTGTTTTTCTTTATTGGACGCTGAATTAGTCATGATTGTTGAAAAGTCTGTCTGGCTAATTTATTGACATTGCATTCACCGGGCATCTAAAGATTCTGATGTATATTATGCTTGGGTTGTTTTTACATTGCACATGCAAACACCCACTTGAAATGTGTGGATATTCTTAATTCTTAAATACAAGGGTTATATGGTTTTGAAATTGCAGTACATGTACATCTCTAGAATCTTGAGTATCCAAAAGAAGTAGATGTTACAAAGTTATAATTGAAATAGCGTCTTTTATGTTTGGTTCTATGAATCCCATTCATCCAAAGCAATGAGAATAAAAATTAACAAGGTATTTTGCAGCTTCTTGTTTTCTCTTTACTGTGTACATTTGAGGACGTTTCTTTAGCTTCTACTGATGTGGCAATTTCATAGCGTGGTTCTTGAATTTCTTCATTCACCACCTTTTTGAATGAGCAGCACGTGTTGTCTGACTCATTTCCTATTTCCTTGTACTCCTACACTATTTTTTGTCTCATTAGTTACTGCCGACACATCTATAGATATTTTTTTTGAACAAACACTTCAAATATTAAAGTTGAAGAACCGTATCTAAAGCATATATTTTACTCATTTGTATTCTGGCATTGTGCAATTTGGGGCCAACTGAATTTATGGGTAGCTAACATCACCAGTCCAACAACTAGCGGATTAGCTGCTCTGCCCGTCTTGTGAAATCAATCTTAGGAGAGCTGTGTTGCATTAAGTGTTTCTGATGCATAAGGTAACATGTGGACTCTCTCAAGTTTGCTATATTTTGAGAATCCGTTCACTGGCTTGCCAATCCCTCAAGTTGCTGCTACTTGACCTGGTTTTTTTGTTAAGTACTCCCTCCGTTTCACAATGTAAGTCATTCTAGCATTTCCCACATTCATATTGATATTAATGAATCTAGATAGATATATATGTCTAGATTCATTAACATCAATATGAATGTGGGAAATGCTAGAATGACTTACATTGTGAAACGGAGGAAGTAGATGTTATTGTCTTCTTCTGAATAAAACATAGTTTTTTCCCTTTCATTTTGGTTAACTTGTCCAAAGTGCATTTCATTATGTTCCATGTTTAGTTGATGGTCGTTTTATTAATTAGCTTGTTAATGTTCCATGTGTAGATCTATCATGCCATATACCTGCATTTCATTTTGTTGAAAACTGTATTTCATCATTTTTTTTTCTTTTTCCTTTGTGGAGATAAGGCTTCAGCATTTGTTGGGAATGGATACAAAGGGTCTCCGTTCAGGAAATACTTTGCCCCCTCCTGGTGACTGTGTATCAAGAACTACCGTTTGTAATGGAAACTCCAAAGATAAGGTAACAGCTTAATTTTGAGTGAAGTAACATAGAGTATTTGCCTGTGCTTTGCCTGTGTCTAGTTTGGTAGTGTAGTTATAATGGAAAAATCTGGTATCGCATGCATGGGTTTCTGGCCCAGCATTGTTCTAACAGTCAATACTTGCATGTGAAGACCTGCAGCGATGATTATGGAGTACTACACAATCACGGTAACAAGAATCTTGGCACGCTGCCAGCTACAACTCTTCAAGAAGAGAAGAAACGTAATAGCACACCTAATAATCAGCAAGGATTGTCTGCCTCCGTGTCTCAGGAATTACCACCGCTTGGACCAAAGGTTCACCATCTCAATGATCAGTTGGCTTCCTGTGGTGATAAGCCCGAAGCATCTGTGCAGTCAGTAAATGGCAATTTGAATTCTAAGCAAGTAACTGCAGCAGGAAATGGAACGGTGGGCACCTTATCAGCAAAACAATATGTTAATGTAGTTTCACAAGGATCAAGTGGTTCAGGTCGCAGATTTACTGTACTTACTAGGCAGACGGCTTCTAGTGATACTCGGTCTAAAGCAACAGGACAAGTCGGTAATGCCTCTTCAGATTCCCAGAAGCTTACTTCGGCAAACAATGAGCACAGTGACAGAATTAAAATTTCTAGGAGTGATAATGTAAAGTTAGTTTCGCAGAGACCAGAGGAACCTTCCCAAATGCTAGCTAATCATTTGACCGGAGCAATTGATAAGACCCACGTTGATACAGATGAAAAGAATGCTCGCTCAGATATAAATGAAAAAACAGTTTGTGGTATTCAGATGCAGCTTAAAGAAAGCACTGCAGCACACAGATCAACTGTGCTGCAGAGTTTGAGGGACAATCCTATGTCCAATAATCTTCCAACATTGGATGTCAAATCTCAGATATCAGTTGTGCCAGACAAGCCTTCAGATTCACAGTCAGCATCTAAAACTCAATTGCAGCCCTCAAATCATAAAAAAACTGCTGTTTGTAGTTCAGATACAGCCAATGCAAGTGATGCATGTGGCATCGCTAATAATCAGGTGCTGTTCCCTGGTGGTAAACATCAAACTTCATCACAAGGGGAGGATCACAGCTTGTACAAGAGGGATAAGAGTCAGTCAGGAGATCAACTTTCATCTCAGCATCCTGGGAATGTTTTCTCACCAAGGCTACTCACTTCACTGTCATCCATTGATATAACTGCCAAGGAAAATAAAGGAATTAAAAGGCACGTTTGTCCTCCTGGATTTGAGGAGCTTCACAGGCCGTCTGATTCTGACAAGATTACATCAGTAAGCTCCCCAACTTCTTCTATTATGTGCTCTGGACCTGATACCCTGGTACAAGATTCATGCTCTGCTAAAGATCAGCCAGACTTCATTAGCTGGGTTTCAGAGTGCCTAGAAGATGGTGGAGAAACTACACAAAGTAATAGGAGCATACCTTCTACTCTCAGTTCCACAGATGCCACTTGGAGATACATGCAGTATCCTGCCTCCTGTTTTTCTGGTGCATCAAATCACTTTCTAGTATCACCGTACCCTAGAGGATTGTCACAGCACACGGTGGGTCGGATTGAAAATACCATGAATTGCTGCTGTTCCCATCCATCTGTCAGTGGCATAGCAAATCACAAGCCTGAATACTGGAGTGGAAGTGACCATAGCTACATGTCTACTGGGGGATATGATGTATTCAGTCAAAGTGCAACATTAGGCATGATAGCTGGTATGGTAGGCACATCGCCCCAACAACCTTCGCCACCTGTTCATTACAATGACTGGACCACGGGAAGTGCTGATTCAGATTTGAAGAGTCCACAGGTTGATCATACATACCCCATGTACTCGCTGTTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002150