BGIOSGA002157

From RiceWiki
Revision as of 10:32, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA002157| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA002157, complete gene.| tag = OSJNBA0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA002157

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002157, complete gene.

LocusTag

OSJNBA0016I09.9

Ensembl Transcript ID

BGIOSGA002157-TA

Ensembl Protein ID

BGIOSGA002157-PA

Length

1872

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:6256473..6258344

Sequence Coding Region

6256473..6258344

Genome Context

<gbrowseImage1> name=IndicaChromosome01:6256473..6258344 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:6256473..6258344 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTCGCCGCCGACCACGGCCGCCGCCGACCCCGGCCGCCGCCGCCGCCTCCTCCTCGTCGTCGTTGTCCTCCTCCTCCTCCTCCTCCCGCTCGTGGCCTCCGCTGCCGCCGTGCCGCACAGGCACCGGCTGCCGTCCCACCACCTGGCCTCGCTCAAACTCAACGCATCGGCGCCGCCGACCACTTACTTCGAGGTGGATCGCCCGATCCGCCCGCCGCGCGGCAGCGTCGGGCCCTGCTCGACGCTGCTCCTCTCCAACTCCTTCGGAGCCACCTACGGCCGTCCCCCTGTCACCGCCGCCTACGCGCCGCCTTCCTGCCTCGCCGGCGGCGGTGGCGGCGGCGGCGGCGCGTCGTCCATCGCGCTCGCCGTGCTCGAGTGGAGCGCCGACTGCCGCGGCCGCCAGTTCGACCGCATCTTCGGCGTGTGGCTCTCCGGCGCCGAGCTCCTGCGCAGCTGCACCGCGGAGCCGCGCGCCACGGGCATCGTCTGGTCCGTGTCCCGCGACGTCACGAGGTACGCGGCGCTCCTAGCCGAGCCCGGCGAGATCGCGGTGTACCTCGGGAACCTCGTCGACAGCACGTACACCGGCGTCTACCACGCCAACCTCACGCTCCACCTCTACTTCCACCCCGCGCCGCCGCCTCCGCCTCCGCCGCAGCAGGCCGATCTGATCGTGCCCATCTCAAGAAGCTTGCCGCTGAACGATGGCCAATGGTTCGCCATCCAGAACTCCACCGATGTGCAGGGCAAGAGGCTCGCCATTCCGTCGAACACCTACCGGGCGATCCTTGAGGTGTTCGTCTCCTTCCACTCCAACGATGAATTCTGGTACACAAACCCTCCCAATGAGTACATTGAAGCAAATAACTTGTCCAATGTCCCTGGCAATGGCGCATTCCGGGAGGTTGTTGTTAAAGTCAATGATGATATCGTTGGAGCTATTTGGCCTTTCACCGTGATTTACACTGGCGGTGTCAATCCTCTTCTGTGGCGACCAATCACCGGCATTGGTTCATTCAACCTACCTACATATGACATTGACATTACACCTTTCTTGGGCAAGCTGTTGGATGGCAAGGAGCATGATTTTGGGTTCGGTGTGACTAATGCGCTGGATGTGTGGTATATTGATGCCAATTTGCATCTATGGTTGGATCACAAGAGTGAGGAGACTACTGGGAGCCTGATCAGCTATGAAGCTCAAGGACTGGTTCTGAATGTGGACTCGGGATTCAGTGGGCTGGATGGGCAGTTTGTAACTAGCGCAAGCCGTCATATCTCCGCTACCGGGTTGGTGAAATCGTCTTATGGGGAGGTCACCACGAATTTTTACCAGAGATTCAGTTATGTGAATAGCAATGTGTATAGCAAGAACGGCTCGGTGCAAGTGGTGAACCAAACCATTGATGCAAAGTCTGGTGTTTTTGCCAAGGATGCTTTGGCTGTGCTGCTCTCTGAGGAACTTCACCAGATCTTCCCTCTGTATGTTTATACTGGTACTTCAGATGAAGAAGCTGATGAGTACACATTGATTTCACACGTCAAATTGGGCGTCAACGAGAAGGAGACATCGGGCGGGAAGATGGGGTTCTCATACAACTCCCTGCGGAACGCGCAGTCGGCCCATGGCAGTATGAAGGTGAAGAAGAATTTGGTCGTTGGTGGATTGGGGGAGACCCATCAGGCGTATAAATATGTTGGTGCTGATGGATGCTACTTCAGGGATGTTAGGAGCAAGAACTACACAGTGCTTTCAGACCACTCTGGTGATTCCTGCACAAAGAGAAATCCTTACAATGGTGCTAAATTCTCTCTCAGGAACGATCAATCAGCAAGAAGGAAGTTGATGGTGAATAATCTTTAG</cdnaseq>

Protein Sequence

<aaseq>MASPPTTAAADPGRRRRLLLVVVVLLLLLLPLVASAAAVPHRHRLPSHHLASLKLNASAPPTTYFEVDRPIRPPRGSVGPCSTLLLSNSFGATYGRPPVTAAYAPPSCLAGGGGGGGGASSIALAVLEWSADCRGRQFDRIFGVWLSGAELLRSCTAEPRATGIVWSVSRDVTRYAALLAEPGEIAVYLGNLVDSTYTGVYHANLTLHLYFHPAPPPPPPPQQADLIVPISRSLPLNDGQWFAIQNSTDVQGKRLAIPSNTYRAILEVFVSFHSNDEFWYTNPPNEYIEANNLSNVPGNGAFREVVVKVNDDIVGAIWPFTVIYTGGVNPLLWRPITGIGSFNLPTYDIDITPFLGKLLDGKEHDFGFGVTNALDVWYIDANLHLWLDHKSEETTGSLISYEAQGLVLNVDSGFSGLDGQFVTSASRHISATGLVKSSYGEVTTNFYQRFSYVNSNVYSKNGSVQVVNQTIDAKSGVFAKDALAVLLSEELHQIFPLYVYTGTSDEEADEYTLISHVKLGVNEKETSGGKMGFSYNSLRNAQSAHGSMKVKKNLVVGGLGETHQAYKYVGADGCYFRDVRSKNYTVLSDHSGDSCTKRNPYNGAKFSLRNDQSARRKLMVNNL</aaseq>

Gene Sequence

<dnaseqindica>1..1872#ATGGCGTCGCCGCCGACCACGGCCGCCGCCGACCCCGGCCGCCGCCGCCGCCTCCTCCTCGTCGTCGTTGTCCTCCTCCTCCTCCTCCTCCCGCTCGTGGCCTCCGCTGCCGCCGTGCCGCACAGGCACCGGCTGCCGTCCCACCACCTGGCCTCGCTCAAACTCAACGCATCGGCGCCGCCGACCACTTACTTCGAGGTGGATCGCCCGATCCGCCCGCCGCGCGGCAGCGTCGGGCCCTGCTCGACGCTGCTCCTCTCCAACTCCTTCGGAGCCACCTACGGCCGTCCCCCTGTCACCGCCGCCTACGCGCCGCCTTCCTGCCTCGCCGGCGGCGGTGGCGGCGGCGGCGGCGCGTCGTCCATCGCGCTCGCCGTGCTCGAGTGGAGCGCCGACTGCCGCGGCCGCCAGTTCGACCGCATCTTCGGCGTGTGGCTCTCCGGCGCCGAGCTCCTGCGCAGCTGCACCGCGGAGCCGCGCGCCACGGGCATCGTCTGGTCCGTGTCCCGCGACGTCACGAGGTACGCGGCGCTCCTAGCCGAGCCCGGCGAGATCGCGGTGTACCTCGGGAACCTCGTCGACAGCACGTACACCGGCGTCTACCACGCCAACCTCACGCTCCACCTCTACTTCCACCCCGCGCCGCCGCCTCCGCCTCCGCCGCAGCAGGCCGATCTGATCGTGCCCATCTCAAGAAGCTTGCCGCTGAACGATGGCCAATGGTTCGCCATCCAGAACTCCACCGATGTGCAGGGCAAGAGGCTCGCCATTCCGTCGAACACCTACCGGGCGATCCTTGAGGTGTTCGTCTCCTTCCACTCCAACGATGAATTCTGGTACACAAACCCTCCCAATGAGTACATTGAAGCAAATAACTTGTCCAATGTCCCTGGCAATGGCGCATTCCGGGAGGTTGTTGTTAAAGTCAATGATGATATCGTTGGAGCTATTTGGCCTTTCACCGTGATTTACACTGGCGGTGTCAATCCTCTTCTGTGGCGACCAATCACCGGCATTGGTTCATTCAACCTACCTACATATGACATTGACATTACACCTTTCTTGGGCAAGCTGTTGGATGGCAAGGAGCATGATTTTGGGTTCGGTGTGACTAATGCGCTGGATGTGTGGTATATTGATGCCAATTTGCATCTATGGTTGGATCACAAGAGTGAGGAGACTACTGGGAGCCTGATCAGCTATGAAGCTCAAGGACTGGTTCTGAATGTGGACTCGGGATTCAGTGGGCTGGATGGGCAGTTTGTAACTAGCGCAAGCCGTCATATCTCCGCTACCGGGTTGGTGAAATCGTCTTATGGGGAGGTCACCACGAATTTTTACCAGAGATTCAGTTATGTGAATAGCAATGTGTATAGCAAGAACGGCTCGGTGCAAGTGGTGAACCAAACCATTGATGCAAAGTCTGGTGTTTTTGCCAAGGATGCTTTGGCTGTGCTGCTCTCTGAGGAACTTCACCAGATCTTCCCTCTGTATGTTTATACTGGTACTTCAGATGAAGAAGCTGATGAGTACACATTGATTTCACACGTCAAATTGGGCGTCAACGAGAAGGAGACATCGGGCGGGAAGATGGGGTTCTCATACAACTCCCTGCGGAACGCGCAGTCGGCCCATGGCAGTATGAAGGTGAAGAAGAATTTGGTCGTTGGTGGATTGGGGGAGACCCATCAGGCGTATAAATATGTTGGTGCTGATGGATGCTACTTCAGGGATGTTAGGAGCAAGAACTACACAGTGCTTTCAGACCACTCTGGTGATTCCTGCACAAAGAGAAATCCTTACAATGGTGCTAAATTCTCTCTCAGGAACGATCAATCAGCAAGAAGGAAGTTGATGGTGAATAATCTTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002157