BGIOSGA002158

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Revision as of 10:32, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA002158| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA002158, complete gene.| tag = P0451C0...")
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Gene Name

BGIOSGA002158

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002158, complete gene.

LocusTag

P0451C06.37

Ensembl Transcript ID

BGIOSGA002158-TA

Ensembl Protein ID

BGIOSGA002158-PA

Length

3647

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:6244936..6248582

Sequence Coding Region

6248447..6248582,6248217..6248349),complement(6247843..6247914,6247578..6247721),complement(6247409..6247510
,6247229..6247293),complement(6246675..6247130,6246148..6246338),complement(6245931..6246063
,6245696..6245853),complement(6245310..6245495,6244936..6245193

Genome Context

<gbrowseImage1> name=IndicaChromosome01:6244936..6248582 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:6244936..6248582 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGTGCGCGGTGGGGGCCTCGCCGCGCCACCGTCGGGCCCCACCTCCGCGACGCGCTGCGTCACCTGCTCTTCGTCTTCCTCGTGCTGCTCCAGGCGCAGGCGGGGCGCGGCGGCGCCACGCTCAACGGCGAAGGAATGGCGTTGCTCGAGCTGAGGGAGAGGGTGGAGGCTGACCCCCATGGCGCCTTGCGGGATTGGGATCCGGCAGACGCCACGCCCTGCAGATGGTCCGGCGTGCATTGCTTTGACGGTAAAGTTGAGATTTTGAACTTAACAGGCCGAGAATTGGTGGGAACTCTCGCACCTGAGATTGGACGTCTTCAACTTTTGAAATCTCTCATTCTTCGAAACAACAATTTCCGTGGGAAAATTCCCAAAGAGTTCGGAGGGTTAACTGCCCTTGAAGTACTGGATTTGAGCAGCAACAACTTGGATGGAACGATTCCAGAAGAATTAATGGCAATGCCACTGCTCAAGCAGCTGTCACTTCATGACAATCAGTTCCAAGATGATATCTCTTCTTTGCACATTCAAGATATATCTGATGAGCAGGCAGGATGCTTGAGCAGAAAATTAGGTTGCTGGGCGGGGTTTAAGGATTGGACTTCTTTCAGTGATCTCCGAGAGAAATACTCCACCAACCTAGCAAGTCTAGGCGAGCCACACATTATGCAAAATTTGCAGTCCTTTGCAAGTGCCGTGGGCCGCAGGCTGCTCGGTGAAGTTGGCAATCTGCCTGCCCTTTCAGGGAATTATGCTAAATCTTCTGGCCCTGTAAATTCAGAAGAGATCCAAAGGGCTATTGATGTTCTCTCTTTAGGGAGTGGTTCATTCTCTGCATTCCCAAATTCAGAGGCCGAAGTTCTGGAATCAGCTGTAAATACTGATGCTGCTGCAATGCAGTCTGGAGCAGCAAATCAATCAACCGATGAAGTGTCTGGTTCAAAGCACAGCAAGTGGGCATATTTTATGATAATTCCAGCTGCAATATTGCTGATTAGCCTGATTGTGGCTCCAATCTTGGTCTGGCGGAAGCGAGGGCGTGCGGCAATAGGACCTTGGAAAACGGGTCTAAGTGGCCCACTTCAGAAAGCATTTGTAACAGGTGTTCCAAAGCTAAACAGACCTGAACTCGAAGCCGCTTGTGAGGATTTCAGTAACATAATCAACACTTTCCCTAGCTGCACCGTGTTCAAAGGGACATTATCTAGCGGAGTTGAGATCAGTGTTGTTTCCACTGCCATTTTGTCGCTCAAAGAGTGGCCTAAGAGTTCAGAGACATGCTTCAGAAAACAGATAGACACACTATCAAGAGTAAACCACAAGAATTTCATCAACCTCCTAGGTTATTGCCTGGAAAATCAACCCTTCATGAGAATGATGGTGTTCGAGTATGCTCCAAATGGCACTCTCTCTGAGCATCTCCACCTCAAAGAATTTGAGCATCTGGACTGGGCTGCAAGGATGAGGATCATCATGGGTGTGGCATACTGTCTCCAATACATGCACCATGATCTCAATCCACCTGTTGCGATAACCGACATGCGCTCCGACACAATTTTCATGACAGATGATTATGCTGCCAAGATTGCTGATGTTGGTATCTGGAAAGAAGTCGCCATAAAAGCAAAGACTGCAAAGGAGGATAGCAGCAGCCGTTCTGAATGTCCTCCTGATATCGCGAGCAACGTCTACTGCTTTGGCACGCTTCTGATAGAGATCATATCCGGAAAGCTCCCTGAAGCAGACGACCAAAAATCCATGTGCAACTGGGCCGCTGAGTATCTGAAGGGCAAGAGCTACAGCAAGCTCGTCGACGCGTCGCTGAAGGAACACAACGCCAACGAGCTGGAGGCCGTCTGCGAGGTGATTCAGGAGTGCATTGATCCCGACTCAGATCAGAGGCCGACGATGAGAGACGCCACCCGCAAGCTGAGACAAGCTCTCAACATCTCGCCGGAGGCAGCGACGCCGCGGCTCTCGCCTCTCTGGTGGGCTGAGCTCGAGATACTCTCTGCAGAGGCAACCTAG</cdnaseq>

Protein Sequence

<aaseq>MGARWGPRRATVGPHLRDALRHLLFVFLVLLQAQAGRGGATLNGEGMALLELRERVEADPHGALRDWDPADATPCRWSGVHCFDGKVEILNLTGRELVGTLAPEIGRLQLLKSLILRNNNFRGKIPKEFGGLTALEVLDLSSNNLDGTIPEELMAMPLLKQLSLHDNQFQDDISSLHIQDISDEQAGCLSRKLGCWAGFKDWTSFSDLREKYSTNLASLGEPHIMQNLQSFASAVGRRLLGEVGNLPALSGNYAKSSGPVNSEEIQRAIDVLSLGSGSFSAFPNSEAEVLESAVNTDAAAMQSGAANQSTDEVSGSKHSKWAYFMIIPAAILLISLIVAPILVWRKRGRAAIGPWKTGLSGPLQKAFVTGVPKLNRPELEAACEDFSNIINTFPSCTVFKGTLSSGVEISVVSTAILSLKEWPKSSETCFRKQIDTLSRVNHKNFINLLGYCLENQPFMRMMVFEYAPNGTLSEHLHLKEFEHLDWAARMRIIMGVAYCLQYMHHDLNPPVAITDMRSDTIFMTDDYAAKIADVGIWKEVAIKAKTAKEDSSSRSECPPDIASNVYCFGTLLIEIISGKLPEADDQKSMCNWAAEYLKGKSYSKLVDASLKEHNANELEAVCEVIQECIDPDSDQRPTMRDATRKLRQALNISPEAATPRLSPLWWAELEILSAEAT</aaseq>

Gene Sequence

<dnaseqindica>1..136#234..366#669..740#862..1005#1073..1174#1290..1354#1453..1908#2245..2435#2520..2652#2730..2887#3088..3273#3390..3647#ATGGGTGCGCGGTGGGGGCCTCGCCGCGCCACCGTCGGGCCCCACCTCCGCGACGCGCTGCGTCACCTGCTCTTCGTCTTCCTCGTGCTGCTCCAGGCGCAGGCGGGGCGCGGCGGCGCCACGCTCAACGGCGAAGGTAACGGCCCCAGAGGAGCAGCTTGCCATGGTGGTGGTAGGCTGGTAGCCGTGTTGCTTGGTCTGACCTCCCATGGCGTCGTGCTTCCTGCGTGCAGGAATGGCGTTGCTCGAGCTGAGGGAGAGGGTGGAGGCTGACCCCCATGGCGCCTTGCGGGATTGGGATCCGGCAGACGCCACGCCCTGCAGATGGTCCGGCGTGCATTGCTTTGACGGTAAAGTTGAGATTTTGTAAGTCTGTTTTTCTCTATGTTTTCCCCCGATACAATGTCTCCTGTGTAAGCCACTAAATTAGTTTTTTGTTCCTGAAGATCCAAATTGAATTGATGTTCGATGCATTTCCATGTGAAAAACGTAGTTAAATGAACTAATTTCGATGATACCAAAATTGGTGGTTTTTATGCAGGAAATGGTTTGTTCTTTGTCATTAGCATGACTGTTCAAAACCGCATTTCTTACTACGATGTTTCTTTATCCTGGCATATTGATGTTCTTAATTGTGCATATGAGTTCTTATCTGTGTGAACATGTAGGAACTTAACAGGCCGAGAATTGGTGGGAACTCTCGCACCTGAGATTGGACGTCTTCAACTTTTGAAATCTCTGTGAGTGCTTAGAACTGTATGGATGATCTGAACTTAGTTTCTTTTCAGCTAGTTCAACGGATTATGCTCTGTGGAATCCACGGGTTGACTGATATTATTCCTACTGGTTATGCTTACCCAGCATTCTTCGAAACAACAATTTCCGTGGGAAAATTCCCAAAGAGTTCGGAGGGTTAACTGCCCTTGAAGTACTGGATTTGAGCAGCAACAACTTGGATGGAACGATTCCAGAAGAATTAATGGCAATGCCACTGCTCAAGCAGCTGTAAGTCTAATTGGGTGCTTCACTCTCTGCTAGTTATTTCGTATAATGAGCAATTATCATCTGTCAGGTCACTTCATGACAATCAGTTCCAAGATGATATCTCTTCTTTGCACATTCAAGATATATCTGATGAGCAGGCAGGATGCTTGAGCAGAAAATTAGGTTGCTGGTATGTGGGCTATTTTGGTGTGTTACCTTTTCAGTTGCTTATAGCCTCCTAATCATTTCCATTTTTTTTTAATTTCTAAAGGTTTTATCTCACCTAACAGATCTTTATTTTACAGGGCGGGGTTTAAGGATTGGACTTCTTTCAGTGATCTCCGAGAGAAATACTCCACCAACCTAGCAAGTAACCGCACATTCAAAAGTTGTATAAATAATCAGCCTTTCTTCCTTTTGTTATGCACAGCATTAAACATTAATTTTACATTGTTTTATGTCTGTCAGGTCTAGGCGAGCCACACATTATGCAAAATTTGCAGTCCTTTGCAAGTGCCGTGGGCCGCAGGCTGCTCGGTGAAGTTGGCAATCTGCCTGCCCTTTCAGGGAATTATGCTAAATCTTCTGGCCCTGTAAATTCAGAAGAGATCCAAAGGGCTATTGATGTTCTCTCTTTAGGGAGTGGTTCATTCTCTGCATTCCCAAATTCAGAGGCCGAAGTTCTGGAATCAGCTGTAAATACTGATGCTGCTGCAATGCAGTCTGGAGCAGCAAATCAATCAACCGATGAAGTGTCTGGTTCAAAGCACAGCAAGTGGGCATATTTTATGATAATTCCAGCTGCAATATTGCTGATTAGCCTGATTGTGGCTCCAATCTTGGTCTGGCGGAAGCGAGGGCGTGCGGCAATAGGACCTTGGAAAACGGGTCTAAGTGGCCCACTTCAGAAAGCATTTGTAACAGGTAAACATTCTTATTATCCTATCTGCTTTTATGGTTTGGGAAGTAGATACATTGCATGCAGAAAAAACAGGAACTACCTGCCAAGTACAAATCTATCATCTATAACAAAATTCGCATAGTTGCATAGCTATTTTGCATTACTCTTATAGCCTGACAAATTTTCAAGGACCTGCTCACCTTTTGTGAACCAATTAATATTTAAGCTGCTCGATATTCATATTTGGAACTGGCCCATGGTCAGTTCAGGAAGTTATTTGGATTTCTTTTTTTTATTATTATATTTCAGAGTCTCTAGGTAATGCAGTTAATCTTCTGTATGTAAATTGTTGCATTCAGGTGTTCCAAAGCTAAACAGACCTGAACTCGAAGCCGCTTGTGAGGATTTCAGTAACATAATCAACACTTTCCCTAGCTGCACCGTGTTCAAAGGGACATTATCTAGCGGAGTTGAGATCAGTGTTGTTTCCACTGCCATTTTGTCGCTCAAAGAGTGGCCTAAGAGTTCAGAGACATGCTTCAGAAAACAGGTCCATGGCTTCCTACATGTTCTAGTTGGAGCAGTAAATCCTTCAATGCTAGATCTTCGCTAATCCCCTGATTTGCTTGTGTAGATAGACACACTATCAAGAGTAAACCACAAGAATTTCATCAACCTCCTAGGTTATTGCCTGGAAAATCAACCCTTCATGAGAATGATGGTGTTCGAGTATGCTCCAAATGGCACTCTCTCTGAGCATCTCCACCGTAAGTTGTTTTATTTTTTCATGACTTCCTCACACATATGGAAACTATTCTGCTCATTGAATGCGCTTGTTTTGCAGTCAAAGAATTTGAGCATCTGGACTGGGCTGCAAGGATGAGGATCATCATGGGTGTGGCATACTGTCTCCAATACATGCACCATGATCTCAATCCACCTGTTGCGATAACCGACATGCGCTCCGACACAATTTTCATGACAGATGATTATGCTGCCAAGGTACAGTTTCAATTAGCTGTAGTGATCTCGGTAACATATGTAGTGTTGCCACTCATTTGAAGCAGCTGAATTGCGCATCTAATTTGTTGCTCAATAACATGTCATTTGGCATTACGACACAAGGTTGAATTGATTAAAATGGATGATTAGCATGACCCTTCCCTTGAGCTAGTGTGATGCTATGTACTCTTCTTGTGCAGATTGCTGATGTTGGTATCTGGAAAGAAGTCGCCATAAAAGCAAAGACTGCAAAGGAGGATAGCAGCAGCCGTTCTGAATGTCCTCCTGATATCGCGAGCAACGTCTACTGCTTTGGCACGCTTCTGATAGAGATCATATCCGGAAAGCTCCCTGAAGCAGACGACCAAAAATCCATGTGCAACTGGGTAAAATCATGCAAACCCAAATAAACTCCAAGAAAACCCCAACTCTTCTCCTCTTTAAGAAGGAAGCTTGATTTCTAGCAAAACACAATTCCAAATTGAATCTCCCTTTGCCACAGGCCGCTGAGTATCTGAAGGGCAAGAGCTACAGCAAGCTCGTCGACGCGTCGCTGAAGGAACACAACGCCAACGAGCTGGAGGCCGTCTGCGAGGTGATTCAGGAGTGCATTGATCCCGACTCAGATCAGAGGCCGACGATGAGAGACGCCACCCGCAAGCTGAGACAAGCTCTCAACATCTCGCCGGAGGCAGCGACGCCGCGGCTCTCGCCTCTCTGGTGGGCTGAGCTCGAGATACTCTCTGCAGAGGCAACCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002158

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA002158&oldid=39882"