BGIOSGA002182

From RiceWiki
Revision as of 10:32, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA002182| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA002182, complete gene.| tag = B1015E0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA002182

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002182, complete gene.

LocusTag

B1015E06.24

Ensembl Transcript ID

BGIOSGA002182-TA

Ensembl Protein ID

BGIOSGA002182-PA

Length

2204

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:5909477..5911680

Sequence Coding Region

5910688..5911680,5909828..5910283),complement(5909477..5909719

Genome Context

<gbrowseImage1> name=IndicaChromosome01:5909477..5911680 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:5909477..5911680 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGAGAGAGAATTCATGGCTGAGGAGAACCAAGTTCTCCCACACCGTGTACACAAGGTTGGATCACCAACGGGCGCCTATTGCTCCCCTTGGCAGGGATGTGGAGCAGAAACTGCAGAGATTTATTAGTATGGGGAAGTCTGTGTCGATGCCTGTTAACCGGGACGAGGATGCAGCGGCTGCGTTCAAGCACTCTGTGAGCTTGCCAACAGCCCGCTCCTTGCTTCAGATTGATAAGGAAAAGGCCAACAAGCAGAAGGCAGATTTTGATATCCCTTCAAGCCCTCCGGTGAACTCTGTTAATTCGAAGGGCCTGAAGGCAAGGAGCCTGGTCAAGAGCCCAAGCTCAGCGATGCTTCTCAGCTACTTGAACAAGGCACACCCGAATCGAGATTCAAACCTCAAGAAGACTGACAGACCTCAGCACAAGCTGAGATCAAAGTCCCCTCTTCCGAATGTAGCGCCTTCTGATGTGTTCAGAGAAGCACGTGCAAGTAGCAGGAGGTTTACAAGCCCTCCCCCAAAGCGAAGGGGATCTGAAAGAAGCATTTACGGCAAATCGTTTGATAGACAACTGTCTGATATGAGCCAAAGCCCTGATTTGTGTTCAACCCCAGTGTCCTCTGATAAGCACAAGTCTCTAAAGGATAGCTCATGGACAAGGAGATATTTTGATAATGGTGGAAGGAGGAGGGTTAGTGCAGTGGACGCTACTGAAGTTCGGAGGAACCGCGGGGTTAGTATGGCTCAGGCAGTTCAAACTACAGTTGATTGGACACTTGATCCATCTAAGCTGCTCGTGGGGCATAAGTTTGCATCTGGGGCATATAGCCGGCTCTACAAAGGACTCTATGATGATAAACCAGTTGCCATTAAATTTATTCGGCAACCTGATGATGACGACAATGGGAAGATGGCTGCAAAACTTGAAAAACAGTATAACAGTGAGGTCAATGCTCTATCTCACCTCTATCACAAGAATGTGATCAAGCTAGTAGCAGCCTATAAATGCCCACCAGTTTTTTACATAATTACTGAGTTCCTCCCTGGAGGTTCCCTGAGGTCATATCTAAATAGCACAGAGCATCACCCCATCCCTCTGGAGAAGATCATATCCATTGCTCTCGATGTTGCCCGTGGGTTGGAGTACATTCACTCTCAAGGGGTCGTGCACCGTGACATTAAGCCAGAGAACATTCTCTTTGATGAGAACTTCTGTGTAAAGATTGCTGATTTTGGGATTGCCTGTGAGGAGTCAATGTGTGATGTGCTGGTGGAAGACGAAGGCACTTACCGGTGGATGGCCCCCGAGATGATCAAGCGTAAGGCATACAACCGGAAGGTCGACGTCTATAGCTTTGGACTACTCCTATGGGAAATGATCTCTGGAAGAATTCCTTTCGATGACTTAACCCCTCTCCAGGCGGCTTATGCTGTTGCAACTAGGCATGCGCGACCAGTAATTCCTCCAGAATGTCCAATGGCTCTGAGACCGTTGATCGAACAGTGTTGCTCATTGCAGCCCGAAAAGAGGCCTGATTTCTGGCAGATTGTTAAAATCCTGGAGGAATTTCATTCTGTTCTCTCCCAAGGTGGCTGCCTCGACTCACTGAAGAGCAGCAACAGCCAGGATCAGAAAAAGCGACTTCTGCATTGGATTCAAAAGCTGAAACCCTCACATAGCACCTGA</cdnaseq>

Protein Sequence

<aaseq>MERENSWLRRTKFSHTVYTRLDHQRAPIAPLGRDVEQKLQRFISMGKSVSMPVNRDEDAAAAFKHSVSLPTARSLLQIDKEKANKQKADFDIPSSPPVNSVNSKGLKARSLVKSPSSAMLLSYLNKAHPNRDSNLKKTDRPQHKLRSKSPLPNVAPSDVFREARASSRRFTSPPPKRRGSERSIYGKSFDRQLSDMSQSPDLCSTPVSSDKHKSLKDSSWTRRYFDNGGRRRVSAVDATEVRRNRGVSMAQAVQTTVDWTLDPSKLLVGHKFASGAYSRLYKGLYDDKPVAIKFIRQPDDDDNGKMAAKLEKQYNSEVNALSHLYHKNVIKLVAAYKCPPVFYIITEFLPGGSLRSYLNSTEHHPIPLEKIISIALDVARGLEYIHSQGVVHRDIKPENILFDENFCVKIADFGIACEESMCDVLVEDEGTYRWMAPEMIKRKAYNRKVDVYSFGLLLWEMISGRIPFDDLTPLQAAYAVATRHARPVIPPECPMALRPLIEQCCSLQPEKRPDFWQIVKILEEFHSVLSQGGCLDSLKSSNSQDQKKRLLHWIQKLKPSHST</aaseq>

Gene Sequence

<dnaseqindica>1..993#1398..1853#1962..2204#ATGGAGAGAGAGAATTCATGGCTGAGGAGAACCAAGTTCTCCCACACCGTGTACACAAGGTTGGATCACCAACGGGCGCCTATTGCTCCCCTTGGCAGGGATGTGGAGCAGAAACTGCAGAGATTTATTAGTATGGGGAAGTCTGTGTCGATGCCTGTTAACCGGGACGAGGATGCAGCGGCTGCGTTCAAGCACTCTGTGAGCTTGCCAACAGCCCGCTCCTTGCTTCAGATTGATAAGGAAAAGGCCAACAAGCAGAAGGCAGATTTTGATATCCCTTCAAGCCCTCCGGTGAACTCTGTTAATTCGAAGGGCCTGAAGGCAAGGAGCCTGGTCAAGAGCCCAAGCTCAGCGATGCTTCTCAGCTACTTGAACAAGGCACACCCGAATCGAGATTCAAACCTCAAGAAGACTGACAGACCTCAGCACAAGCTGAGATCAAAGTCCCCTCTTCCGAATGTAGCGCCTTCTGATGTGTTCAGAGAAGCACGTGCAAGTAGCAGGAGGTTTACAAGCCCTCCCCCAAAGCGAAGGGGATCTGAAAGAAGCATTTACGGCAAATCGTTTGATAGACAACTGTCTGATATGAGCCAAAGCCCTGATTTGTGTTCAACCCCAGTGTCCTCTGATAAGCACAAGTCTCTAAAGGATAGCTCATGGACAAGGAGATATTTTGATAATGGTGGAAGGAGGAGGGTTAGTGCAGTGGACGCTACTGAAGTTCGGAGGAACCGCGGGGTTAGTATGGCTCAGGCAGTTCAAACTACAGTTGATTGGACACTTGATCCATCTAAGCTGCTCGTGGGGCATAAGTTTGCATCTGGGGCATATAGCCGGCTCTACAAAGGACTCTATGATGATAAACCAGTTGCCATTAAATTTATTCGGCAACCTGATGATGACGACAATGGGAAGATGGCTGCAAAACTTGAAAAACAGTATAACAGTGAGGTCAATGCTCTATCTCACCTCTATCACAAGAATGTGATCAAGGTAACAAATAACCGCTTTTCATCTTGCATCTTGCATTATTCTGCCATAATCACCATATAAATCTATGGAAGTGTGTTCTTAGATTTTACTTGAGTTACTTCTGATGACCATGAAGTCTGGTATTGTGATCAGATTAAATTAATACTGTAGCCTTTATTTCATAAAAAAGAACACTTAGGATAATCCACAAACTCTGTCAGACATTTCAGCTTATGTTCTCTTCTCTTAAGGTATTTGATCTTATTTGATTAACACTGTTCTATAAAATTCCCAGGATATTCATTCACTTTATATGGTTGGCTTGATTGATTGACATTAGCTGATCACTGAATAATCTCTGAAATACTCAATTTTTATGATTTTGCTAATGGCAAACCTTCTCTGATCTTATTTATGTAATGCAGCTAGTAGCAGCCTATAAATGCCCACCAGTTTTTTACATAATTACTGAGTTCCTCCCTGGAGGTTCCCTGAGGTCATATCTAAATAGCACAGAGCATCACCCCATCCCTCTGGAGAAGATCATATCCATTGCTCTCGATGTTGCCCGTGGGTTGGAGTACATTCACTCTCAAGGGGTCGTGCACCGTGACATTAAGCCAGAGAACATTCTCTTTGATGAGAACTTCTGTGTAAAGATTGCTGATTTTGGGATTGCCTGTGAGGAGTCAATGTGTGATGTGCTGGTGGAAGACGAAGGCACTTACCGGTGGATGGCCCCCGAGATGATCAAGCGTAAGGCATACAACCGGAAGGTCGACGTCTATAGCTTTGGACTACTCCTATGGGAAATGATCTCTGGAAGAATTCCTTTCGATGACTTAACCCCTCTCCAGGCGGCTTATGCTGTTGCAACTAGGGTAATGGTTTCTTTCTCAATTTGAGTATACCTCCTAAGAGTAATTTTGTTGCTCCGCAGATGTCCAAAAACTTATGCCTCCTTTTTCTCTCCGTGTTTAATTTTTCAGCATGCGCGACCAGTAATTCCTCCAGAATGTCCAATGGCTCTGAGACCGTTGATCGAACAGTGTTGCTCATTGCAGCCCGAAAAGAGGCCTGATTTCTGGCAGATTGTTAAAATCCTGGAGGAATTTCATTCTGTTCTCTCCCAAGGTGGCTGCCTCGACTCACTGAAGAGCAGCAACAGCCAGGATCAGAAAAAGCGACTTCTGCATTGGATTCAAAAGCTGAAACCCTCACATAGCACCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002182