BGIOSGA002213

From RiceWiki
Revision as of 10:32, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA002213| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA002213, complete gene.| tag = P0671B1...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA002213

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002213, complete gene.

LocusTag

P0671B11.24

Ensembl Transcript ID

BGIOSGA002213-TA

Ensembl Protein ID

BGIOSGA002213-PA

Length

2526

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:5361067..5363592

Sequence Coding Region

5363533..5363592,5362793..5362892),complement(5362598..5362695,5362412..5362500),complement(5362257..5362317
,5362083..5362169),complement(5361923..5362000,5361778..5361834),complement(5361616..5361671
,5361391..5361526),complement(5361067..5361288

Genome Context

<gbrowseImage1> name=IndicaChromosome01:5361067..5363592 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:5361067..5363592 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGGACTCGAGCGGGTCGGTGTCCATCGACGTGGAGCGGATCTCCTTCGGCGGCAAGGAACACCGAGTGCGAACCAGATATGGCTCTGTATCTGTTTCTGTATTTGGAGATGAAGACAAGCCGGCGCTCATAACATACCCGGATGTAGCTCTAAATTATATGTCTTGCTTTCAAGGATTGTTCTTCTGCCCAGAGGCCGCGTCGCTGTTGCTTCACAATTTTTGTATTTACCACATCACTCCTCAAGGTCATGAGTTGGGAGCGGCTCCAATTTCATCCGATGTGCCCGTGCCATCTGTTGATGAGCTTGTGGATCAAGTCGCGGATGTTCTTGATTTCTTCGGATTAGGATCTGTGATGTGTTTGGGTGTCACTGCCGGTGCCTACATTCTCACCCTCTTTGCAACAAAATACCGGGATAGAGTGATTGGCCTTATGCTAGTTTCGCCGCTATGCAAAGCCCCTTCTTGGAGCGAGTGGTTGTACAATAAGGTATTATTAAACTTGCTTTACTATTATGGGAGTCGTGGGCTAGTCAAGGAATGCTTGCTTCAGCGGTATTTTAGCACGGAAGTTCGTGGGAATGGACAAGACCCTGAATCAGAGATTGTGCAAGCCTGTAGAAGTTTACTTCATGAGCGACAGGGATCTAATGTATGGCGATTCCTTCAGGCGATAAACGAGAGACATGACCTGACGGAAGCGTTGAAGAAGCTTCAGTGTCGGACACTGATTTTTGTGGGAGAGAACTCACAGTTCCACGACGACGCAGTCCATATGACCACAAAGCTAGACCGGAGATATTGCGCCCTAGTCGAGGTTCAGGCATGCGGGTCACTCGTCACCGAGGAGCAACCGCACGCGATGTTGATCCCCATGGAGTACTTCCTCATGGGATATGGGCTCTACAGACCTTCCCAGCTGGATAGCAGCCCCCGGAGCACACTGAACCCATTCTGTATATCGCCTGAACTTCTGTCACCGGAGAGCATGGGAGTGAAGCTGAAGCCCATCAAGACTCGGATCTCGCTCAAAGTTTAG</cdnaseq>

Protein Sequence

<aaseq>MGDSSGSVSIDVERISFGGKEHRVRTRYGSVSVSVFGDEDKPALITYPDVALNYMSCFQGLFFCPEAASLLLHNFCIYHITPQGHELGAAPISSDVPVPSVDELVDQVADVLDFFGLGSVMCLGVTAGAYILTLFATKYRDRVIGLMLVSPLCKAPSWSEWLYNKVLLNLLYYYGSRGLVKECLLQRYFSTEVRGNGQDPESEIVQACRSLLHERQGSNVWRFLQAINERHDLTEALKKLQCRTLIFVGENSQFHDDAVHMTTKLDRRYCALVEVQACGSLVTEEQPHAMLIPMEYFLMGYGLYRPSQLDSSPRSTLNPFCISPELLSPESMGVKLKPIKTRISLKV</aaseq>

Gene Sequence

<dnaseqindica>1..60#701..800#898..995#1093..1181#1276..1336#1424..1510#1593..1670#1759..1815#1922..1977#2067..2202#2305..2526#ATGGGGGACTCGAGCGGGTCGGTGTCCATCGACGTGGAGCGGATCTCCTTCGGCGGCAAGGTCCGTGCGCTCTGCTTTCGGTCTCTCCCGTTTCTTGCTTGATTCCCCTCCTTCAAGCTTGGTTTGGTGGGGATTTGTGTTTTGGTTTCATGGTGGTTAAGGTAGGAGCGGGGATATTCCTACTCCCTGATTTTGGTTTCTTGCTGTTCTTGATTAGAGCAGCAAATGCTTCAAATTTTTGGGGGTGCCATGGAGCTCCTTTTCGTTACTGTTCACTTGTTCAGGGACATTGCACAAATTAGGAGCATTAGATTAGATGCCTATGATTTTGGTCAGTAATAGCTAGTTCTTGCAGCTCCTCGTTTTGTTATGGTTGCAATGTTACTCGAGCCGTAGGAGCAGGAAGAGAGGAAAAACAAAAATACACGCAAAAATGTAGCATCTTTGTTTGCTTTTAATGTTAATTAAGAACGGAAGCCCCTACGCTACAGCTTCCAATTAGTGCTTATCAACGCAATGACAAGGAGAATCTCTCTTATGTTGCTTCTATTTGTTAAGCAATGTCGGTGGAGGTTTCACCGAGGGGAAGCAATACCTCTTGGTTAATTGCTGGTTCTGATTGATTATTCATTATACTATTGTTTCAAATAGGATTGTCAAATCCCAATGGGCTAAATTTGTGTCCTGTGTTTTTTACCAGGAACACCGAGTGCGAACCAGATATGGCTCTGTATCTGTTTCTGTATTTGGAGATGAAGACAAGCCGGCGCTCATAACATACCCGGATGTAGCTCTAAATTGTGAGTTTTCTGATGACCTTTCAAGTTTGTAGGTGAAAGCTTGCTAATTTTTCCATGGCAGGGTAGCTGATGTTGCTTTTTTTTTTTTGTTTGGTAGATATGTCTTGCTTTCAAGGATTGTTCTTCTGCCCAGAGGCCGCGTCGCTGTTGCTTCACAATTTTTGTATTTACCACATCACTCCTCAAGGTCATGAGGTCAGTCATGATGGCTCTTTCTTACCCAATATTATGTAAGCATTCACTGTTTGCCCGTATTTGCTCTGATACTTACATGTGTTATTTTGTCCTACAGTTGGGAGCGGCTCCAATTTCATCCGATGTGCCCGTGCCATCTGTTGATGAGCTTGTGGATCAAGTCGCGGATGTTCTTGATTTCTTCGGGTACTGTATCACGACACTGGCCAAATTGCGCCTTATAATCGGCTGGTGCTTGATCGACGCCTCTAATGCTGTGCTTCTGGCTTTGCTCATACAGATTAGGATCTGTGATGTGTTTGGGTGTCACTGCCGGTGCCTACATTCTCACCCTCTTTGCAGTAAGTATTACTCTGAGCAGTTATTTCAAAGCTTGCCTTGTCTTTTCTTTTTCTTTTTCTTAAGAATGTATGTATACATTGTCACAGACAAAATACCGGGATAGAGTGATTGGCCTTATGCTAGTTTCGCCGCTATGCAAAGCCCCTTCTTGGAGCGAGTGGTTGTACAATAAGGTACTAACATACATTTAAATCTGTCGGTACTGCAGTATTGGTAATGTGTTCTGTGAATTAACCTCAAACTCTTATGTACCAGGTATTATTAAACTTGCTTTACTATTATGGGAGTCGTGGGCTAGTCAAGGAATGCTTGCTTCAGCGGTATTTTAGCACGGTATACTTGGTCTTCTGTTAGCTGCTTTTTATTTGCATCCTTTTATGTATATCAGCTTCGCTCAACAGTTTTCTGATGCTATGTGCAGGAAGTTCGTGGGAATGGACAAGACCCTGAATCAGAGATTGTGCAAGCCTGTAGAAGTGTAAGTAGTTCATCTCCTCGTCAGCTTTCTGATATGATTTTGACAAGATTGGTAGCTGTCTACTTATAGAAAGTTAGTCTGAAGCAATAGGTTTCCTTTTATGCAGTTACTTCATGAGCGACAGGGATCTAATGTATGGCGATTCCTTCAGGCGATAAACGAGTAAGTGGACAAATTATCTTCTGTGCATTGCCTGAACATGCAAAGAAACAGGATTTGAACATACTCAAGTGAATTTTTCCATCCATCAGGAGACATGACCTGACGGAAGCGTTGAAGAAGCTTCAGTGTCGGACACTGATTTTTGTGGGAGAGAACTCACAGTTCCACGACGACGCAGTCCATATGACCACAAAGCTAGACCGGAGATATTGCGCCCTAGTCGAGGTATAAAGACCATATCACAATTTAACAGCTGACATAGCAAATTGATGATCCATACGCAGAGTAAGGCAAGTTCTGAATGTGCATTTCGCCTCTAAATCGCAGGTTCAGGCATGCGGGTCACTCGTCACCGAGGAGCAACCGCACGCGATGTTGATCCCCATGGAGTACTTCCTCATGGGATATGGGCTCTACAGACCTTCCCAGCTGGATAGCAGCCCCCGGAGCACACTGAACCCATTCTGTATATCGCCTGAACTTCTGTCACCGGAGAGCATGGGAGTGAAGCTGAAGCCCATCAAGACTCGGATCTCGCTCAAAGTTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002213

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA002213&oldid=39937"