BGIOSGA002229

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Revision as of 10:33, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA002229| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA002229, complete gene.| tag = OS01G01...")
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Gene Name

BGIOSGA002229

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002229, complete gene.

LocusTag

OS01G0188400

Ensembl Transcript ID

BGIOSGA002229-TA

Ensembl Protein ID

BGIOSGA002229-PA

Length

4870

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:5147909..5152778

Sequence Coding Region

5152719..5152778,5152359..5152600),complement(5151183..5151303,5151025..5151099),complement(5150740..5150891
,5150538..5150643),complement(5150402..5150467,5150202..5150297),complement(5150040..5150111
,5149848..5149931),complement(5149622..5149720,5149474..5149521),complement(5149324..5149377
,5149132..5149230),complement(5148919..5149008,5148750..5148827),complement(5148493..5148567
,5148311..5148401),complement(5148090..5148218,5147909..5147997

Genome Context

<gbrowseImage1> name=IndicaChromosome01:5147909..5152778 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:5147909..5152778 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCTGTCCGCGCGCGCCGCCGCCACCGCCGCCGCCGCCGCCGCCGCCGCCTCCCCGCTGTGGAAGCGCGGCGAGGGTGGCAGCAGCGGGAGCGGGAGCGGATGCACGAGCTGCAGGGAGGTGCGGAGGAGGGCCGCGGCGGTGAGGGTCCGTGCGGCGGCGCCGAGGAGGGTGGAGGCGGTCGCGATGGAGTCCGCGGCGGAGACCGAGAAGGAGGAGGAGGTTGCGGCGGCCGGCGGCGGGGTTGAGGACATGGCTACCGAGGAGGTGCCCGTCACGCCATGGGCCTTCTCCGTCGCGAGTGGTTACACCCTTTTGAGGGATCCACATCACAACAAGGGCCTTGCCTTTAGTGAGAAGGAGCGGGATGCTCATTACTTACGTGGCCTTCTTCCTCCGGCAGTTGTGTCTCAGGATCTTCAAGTGAAGAAGATCATGCATAATCTTCGCCAGTACAGTGTACCTTTGCAGCGTTACATGGCCATGATGGATCTCCAGGAGAGGAACGAGAGGCTCTTCTACAAGCTTTTGATTGATAATGTGGAGGAGCTTCTCCCTGTGGTGTATACACCAACAGTAGGTGAGGCCTGCCAGAAGTATGGGAGCATATTTAGACAACCACAGGGTCTCTATGTCAGCTTGAAGGACAAGGGAAAGGTTCTTGATGTGCTAAGGAACTGGCCAGAGAGAAACATTCAAGTTATTGTTGTTACTGATGGTGAGCGCATTTTGGGGCTTGGAGATTTGGGTTGTCAGGGAATGGGTATTCCTGTTGGTAAACTTTCTCTGTACACTGCCCTTGGAGGAGTTCGCCCGTCAGCTTGTTTACCTATCACGATTGATGTTGGTACAAACAATGAGCAATTGTTGAATGATGAATTCTACATTGGGCTCCGGCAAAGGCGTGCTACTGGCAAGGAGTACCATGAGCTCATGGAAGAATTTATGAGTGCCGTTAAGCAAATCTATGGTGAGAAAGTTCTGATACAGTTTGAGGACTTCGCCAATCACAACGCATTTGATTTGCTTGCAAAATACAGCAAGAGTCATCTTGTTTTCAATGATGATATCCAGGGAACAGCATCTGTGGTCCTTGCAGGTCTTTTATCATCACTAAAGGTGGTTGGTGGAACCCTGGCTGAACACACTTATTTGTTCCTTGGTGCTGGTGAGGCTGGAACTGGTATTGCAGAACTCATTGCTCTTGAGATTTCAAAACAGACAAAGGCTCCAATTGAGGAGTGCCGCAAGAAGGTTTGGCTGCTGGATTCAAAGGGGTTGATCGTTAACTCACGAAAAGAATCCCTCCAGGCATTTAAAAAGCCTTGGGCACATGAGCATGAACCTGTAACGACACTGTTAGATGCTGTCCAGTCCATCAAACCTACTGTGCTGATTGGAACATCCGGAGTTGGCAAAACTTTTACTAAAGAAGTTATTGAGGCCATGGCTTCCTTTAACGAGCGACCCGTCATTTTCTCTCTGTCAAACCCCACATCACACTCTGAGTGTACTGCTGAAGAAGCATATAACTGGAGCCAGGGTCGTGCAGTATTTGCCAGCGGCAGTCCGTTTGACCCTGTGGAGTACAATGGAAAGATACATGTGCCAGGCCAGTCGAACAATGCCTACATTTTCCCTGGATTCGGCCTCGGTGTTGTAATCTCTGGAGCTGTCCGTGTTCACGAGGATATGCTTCTAGCTGCCTCGGAAACACTAGCTGATCAGGCCACTCAGGAGAACTTTGAGAAGGGATCGATCTTCCCGCCCTTCACAAACATCAGAAAGATTTCTGCTCGCATTGCCGCAAGCGTGGCTGCAAAAGCCTATGAACTTGGACTGGCGACCCGGCTGCCTCAACCCAGGGATCTGGAGAAATACGCAGAGAGCTGCATGTACACCCCCGTATACCGCAGCTACCGGTAA</cdnaseq>

Protein Sequence

<aaseq>MLSARAAATAAAAAAAASPLWKRGEGGSSGSGSGCTSCREVRRRAAAVRVRAAAPRRVEAVAMESAAETEKEEEVAAAGGGVEDMATEEVPVTPWAFSVASGYTLLRDPHHNKGLAFSEKERDAHYLRGLLPPAVVSQDLQVKKIMHNLRQYSVPLQRYMAMMDLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRQPQGLYVSLKDKGKVLDVLRNWPERNIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGVRPSACLPITIDVGTNNEQLLNDEFYIGLRQRRATGKEYHELMEEFMSAVKQIYGEKVLIQFEDFANHNAFDLLAKYSKSHLVFNDDIQGTASVVLAGLLSSLKVVGGTLAEHTYLFLGAGEAGTGIAELIALEISKQTKAPIEECRKKVWLLDSKGLIVNSRKESLQAFKKPWAHEHEPVTTLLDAVQSIKPTVLIGTSGVGKTFTKEVIEAMASFNERPVIFSLSNPTSHSECTAEEAYNWSQGRAVFASGSPFDPVEYNGKIHVPGQSNNAYIFPGFGLGVVISGAVRVHEDMLLAASETLADQATQENFEKGSIFPPFTNIRKISARIAASVAAKAYELGLATRLPQPRDLEKYAESCMYTPVYRSYR</aaseq>

Gene Sequence

<dnaseqindica>1..60#179..420#1476..1596#1680..1754#1888..2039#2136..2241#2312..2377#2482..2577#2668..2739#2848..2931#3059..3157#3258..3305#3402..3455#3549..3647#3771..3860#3952..4029#4212..4286#4378..4468#4561..4689#4782..4870#ATGCTGTCCGCGCGCGCCGCCGCCACCGCCGCCGCCGCCGCCGCCGCCGCCTCCCCGCTGGTACGTACTCCCCTCGAGCGAGGAGTTTGCTTGTGTGGTTTTGGGGGGTTTTGGGGTTGGGGGGGGGGGATATACGAACGAACGAGCGTGACGTGTTTGTGTTTTTGTGCCTCTGCAGTGGAAGCGCGGCGAGGGTGGCAGCAGCGGGAGCGGGAGCGGATGCACGAGCTGCAGGGAGGTGCGGAGGAGGGCCGCGGCGGTGAGGGTCCGTGCGGCGGCGCCGAGGAGGGTGGAGGCGGTCGCGATGGAGTCCGCGGCGGAGACCGAGAAGGAGGAGGAGGTTGCGGCGGCCGGCGGCGGGGTTGAGGACATGGCTACCGAGGAGGTGCCCGTCACGCCATGGGCCTTCTCCGTCGCGAGGTGAGCGGTGCTCGAATCGGATCGGATCGCCGTGGGGGGGCTGGATCTTGGTGGGGTCGCGGCGGAAGTTACGATGCGTCGATCTGAAGCACTTTTTTGGGGATTTTTTTTTTTGCCGATTTAGCTCAGCTTGCGCGTTGATCTGGGTTAGGTATACGGTTTCGCCCGCGTGATAAATATTCTAATCCGTTTTGGAATTTTGACGTGCCTAGAAGTGAGGATGCGTCGCCTTCTCGCAGCTCGGTTTGTTTTGTTGCTTGTTTGCTCGAATCGTGCTAAATCTCGAATTTGTGTTGATCCAGTCGATTTCTTTGTCGTGTGGCAGTTGCCAAAGCTGAATCTGTCCCTTTCATTTGTTTGTTTGCGTAATTTACCGCAGCCTTCTCCTCACGAAGAAACATATTACAATCAGTTCAGCTCAAATTTGTTTTCTTCTTTCTTGCCTCAAGTCAGCGGATTATACGGTTCTTATTTTTTTTACAGTATATTCATTTTATTCGCAGAATATCGGTTTCAAAAAAAAAATTCGCAGAATATTACTGTTGGTGTTTTTTTTTTTGATAATTTATACTGCTGGAGTAATCTGAACTGGGTTAATGTTGGATGGATTTTGAGTAGGTCCCGGGTAGCTGAGAAAAAAAGATTTGATTGTTTTCTTCTACTAGTAGCTTTTTATATTTCCTGCACTCCTGTGAGTGGGGTATATTCTAATCTGGCCCATGCCATGCCAATATTGTCTGTCTTTGTTTTCTCCGCCATCCCTTGACAATGAAATTTAGCTGGAAATTAATTATAAATTTAACACACATGTGCTGAGTTATATAGTAATAATTATCACCTAGATCGTAAAATACAGCTGAGAACAGTAACTTACAGCAAGTACTGCAAAACACCAATTTAGGCACTCATAAGGAGAATCGTGCTACTATAGAATGTTGGTCTGGCAGTTTTTTTTTCATACGAATAAGTGGCCATAATTTTGTGCACTGAGAACTGATTTATTTCGTTCACCATGCTGAAATGGAGTTGCTGATGTAATTGATCTTGTGCAACAGTGGTTACACCCTTTTGAGGGATCCACATCACAACAAGGGCCTTGCCTTTAGTGAGAAGGAGCGGGATGCTCATTACTTACGTGGCCTTCTTCCTCCGGCAGTTGTGTCTCAGGATCTTCAAGTACGAGCTACATCAATAAGCAACTATAACCTGTTTATCACTCTGTGGCGTTTATTTTAAGCCCTCCTTAATGTTTTGTGCAGGTGAAGAAGATCATGCATAATCTTCGCCAGTACAGTGTACCTTTGCAGCGTTACATGGCCATGATGGATCTCCAGGTAATCCAAATTAATCTTTTTTACCTGATGACTTCTTGAATGATTTACAATTTAACAAAAATGACTGGGCATTGGGCAATGTGGAGGAACAGCATGTTGAAGATATGATAATAATACCTTTTGTGTTTATCAGGAGAGGAACGAGAGGCTCTTCTACAAGCTTTTGATTGATAATGTGGAGGAGCTTCTCCCTGTGGTGTATACACCAACAGTAGGTGAGGCCTGCCAGAAGTATGGGAGCATATTTAGACAACCACAGGGTCTCTATGTCAGCTTGAAGGACAAGTATGTTTGCCTAGCTTTGCTTGAATATCCAAGAATAGTGTGTTGATTTTATTCTCTCTACCTATTCGATTTGGACTGACTGGAAGTGCATTCTAGGGGAAAGGTTCTTGATGTGCTAAGGAACTGGCCAGAGAGAAACATTCAAGTTATTGTTGTTACTGATGGTGAGCGCATTTTGGGGCTTGGAGATTTGGGTTGTCAGGTATGATTGTCTGATTAGTTGCTTACTTCAGAAACTTTACTTATTGTTGTTGCAATGATCTTTCCTACAGGGAATGGGTATTCCTGTTGGTAAACTTTCTCTGTACACTGCCCTTGGAGGAGTTCGCCCGTCAGCTGTAAGCATTCATATCCATTACATTATGGTTTCGGCTGTTTCTACCAGAAAACTGTAAAAACAGCCAAATCATCTGAATTTGCAAATTGCACTTTTACTTTGTAGTGTTTACCTATCACGATTGATGTTGGTACAAACAATGAGCAATTGTTGAATGATGAATTCTACATTGGGCTCCGGCAAAGGCGTGCTACTGGCAAGGTACCACCAAAAAGGGTTTGCTTGGAGTAATGAAGGTGTTGTATAAATTGACAACTTAAGATCTGAACCTTGTCTTGTCCTTGATGGCAGGAGTACCATGAGCTCATGGAAGAATTTATGAGTGCCGTTAAGCAAATCTATGGTGAGAAAGTTCTGATACAGGTCTGCCCCAGCCTCATAGTAAAATATATTTTTATTATTTGATCTTTTCATTGTTTTCATAATAGACATAATATAAGGGCTAATGAAACTGAATCTTCCTTGTGCCAGTTTGAGGACTTCGCCAATCACAACGCATTTGATTTGCTTGCAAAATACAGCAAGAGTCATCTTGTTTTCAATGATGATATCCAGGTAAATGAACCACTTGTGTTGTTTGAGCCATGATATTTTTAGTTTCACCACAATATATTCTTATAGAATAAATTTCCACTGTTCTGTTTGTTGCCCTCTAAATTAAACCAAAATGTATGGATTGCAGGGAACAGCATCTGTGGTCCTTGCAGGTCTTTTATCATCACTAAAGGTGGTTGGTGGAACCCTGGCTGAACACACTTATTTGTTCCTTGGTGCTGGTGAGGTTGGTCAAGATTTCTCTTATCGGCTTATTGTAATCTTTGCTCAACTGTTGAAACATGACGTAATCCCTGAAACACATAACATGATGCATTTGCATGCAGGCTGGAACTGGTATTGCAGAACTCATTGCTCTTGAGATTTCAAAACAGGTAATATAGTGTTTCACAATCTAACTGCTGTACTGTTATAATAATTCATTATGGTACTTACGGCTTATAACTTTGCTGGTTTCAATTGGTTTTCAGACAAAGGCTCCAATTGAGGAGTGCCGCAAGAAGGTTTGGCTGCTGGATTCAAAGGTATAGAACCAAAAGGAATAGAATGCTGTTAATGCAACATTTCACCTCTGCATCCAACAGTTTTAACACCATACAATTTGTGCTATTTTGTAGGGGTTGATCGTTAACTCACGAAAAGAATCCCTCCAGGCATTTAAAAAGCCTTGGGCACATGAGCATGAACCTGTAACGACACTGTTAGATGCTGTCCAGGTATTCATCTGATGCACATCCAAGATTTATTCAATTATTAGCTGATGGTTTTGCCGAAACTTGTGCTGTTTATGCTTGTTTTCTTGTATCCTAATGGTTAATGTTTACCTATTCTTTCTGTAGTCCATCAAACCTACTGTGCTGATTGGAACATCCGGAGTTGGCAAAACTTTTACTAAAGAAGTTATTGAGGCCATGGCTTCCTTTAACGAGGTTAGTTGGACATCTTTGTCGTCAAGTTGTAACTTTGTGGTATTTACCAGATGATTGTCTAACTTCTGATATTGGAAATCCCAAAATGCAGCGACCCGTCATTTTCTCTCTGTCAAACCCCACATCACACTCTGAGTGTACTGCTGAAGAAGCATATAACTGGAGCCAGGTGAGCTGCAAATCTGTACTTGTTGAGCATCTGGCATTATGAACTCACTGTTTTAAATCCTATGCCATTTGACTACCAACTTTTACTAAAGAGACATCGTGCTATGCATATTTAGCACAAAAAAATGATTTTGTAAAACGTGATAATGCATAACTCATGATGATCCATCCGTATCCTTGCAGGGTCGTGCAGTATTTGCCAGCGGCAGTCCGTTTGACCCTGTGGAGTACAATGGAAAGATACATGTGCCAGGCCAGGTACTGCTTCCTTGCTTAAATACTTATTCCAAGAGACAGCAAAGCCAAAATAGAAATTGACTGTTACTAATTGATTCGCTATTCACAACAGTCGAACAATGCCTACATTTTCCCTGGATTCGGCCTCGGTGTTGTAATCTCTGGAGCTGTCCGTGTTCACGAGGATATGCTTCTAGCTGCCTGTAAGTACTCAGTCGAATGTTTGCTCAAATCCGAAACAGTTATGACGCGTACCGCAGTACTACACCAGAACTAATTCCATTCTCGTAAACAGCGGAAACACTAGCTGATCAGGCCACTCAGGAGAACTTTGAGAAGGGATCGATCTTCCCGCCCTTCACAAACATCAGAAAGATTTCTGCTCGCATTGCCGCAAGCGTGGCTGCAAAAGCCTATGAACTTGGTATGTCGTTTACTCTAGTCACACTTTCCACGACCATCCAGGTCCTGTGCCAAAAAACCGTGGCCTCTGACACGGCCAATCGTTCTGTGCAGGACTGGCGACCCGGCTGCCTCAACCCAGGGATCTGGAGAAATACGCAGAGAGCTGCATGTACACCCCCGTATACCGCAGCTACCGGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002229