BGIOSGA002232

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Revision as of 10:33, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA002232| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA002232, complete gene.| tag = P0512G0...")
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Gene Name

BGIOSGA002232

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002232, complete gene.

LocusTag

P0512G09.15

Ensembl Transcript ID

BGIOSGA002232-TA

Ensembl Protein ID

BGIOSGA002232-PA

Length

3611

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:5122371..5125981

Sequence Coding Region

5125663..5125981,5123073..5123281),complement(5122371..5122943

Genome Context

<gbrowseImage1> name=IndicaChromosome01:5122371..5125981 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:5122371..5125981 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACGAGGCGGTGCTCGCACTGCAGCAACAACGGCCACAACGCGCGGACCTGCCCCGCCCGCGGCGGCGGTGGAGGCGGAGGCGGGGTGAGGCTGTTCGGCGTGCGGCTCACGTCGCCGCCGGAGGTGGCGATGAAGAAGAGCGCGAGCATGAGCTGCATCGCGTCGTCGCTCGGGAGTGGCGGTGGGTCAGGGGGTTCGTCGCCGGCGGGAACGGGAAGGGGAGGAGGAGGAGGGGGAGAGGGCGCGGCCGGGTACGCGTCCGACGACCCCACGCACGCCTCCTGCTCGACGAATGGCCGCGGCGAGCGGAAGAAAGGTACACCTTGGACTGAAGAAGAGCATAGAATGTTTCTAATGGGTCTGCAGAAGCTTGGTAAAGGAGACTGGCGTGGGATCTCTCGTAATTTTGTTGTTTCCAGGACACCAACTCAGGTGGCTAGCCATGCTCAAAAGTACTTCATTAGACAGACAAACTCATCAAGAAGGAAGAGGAGGTCAAGCTTGTTTGACATGGTCCCAGAAATGCCCATGGACGAATCCCCAGTGGTCGTAGAACAGCTTATGCTCCATAGTACTCAAGACGAAGCCACAAGCTCAAATCAATTGCCAATATCACATCTTGTGAAACAGAAGGAACCTGAGTTTGCTAGACACCTGTCGGATTTGCAGCTAAGGAAGCATGAGGAATCTGAGTTCACAGAACCTTCACTAGCAGCACTAGACTTGGAGATGAACCATGCTGCACCTTTCAAGACTAAATTTGTTCTGACAATGCCAACATTCTACCCGGCATTAATACCTGTTCCACTAACTCTTTGGCCTCCAAATGTTGCTAATGTGGGTGAATCAGGCACAAATCATGAAATCCTAAAGCCCACTCCAGTGAATGGAAAGGAGGTGATCAATAAGGCTGATGAGGTTGTTGGCATGTCCAAGCTTACCATAGGTGACGGCAGCTCTAACTCCATAGAACCCTCTGCTCTTTCCCTTCAGCTTACTGGACCGACAAATACAAGACAATCAGCTTTTCATGTGAACCCACCAATGGCTGGACCTGACCTAAATAAGAGAAACAACAGCCCAATTCATGCAGTTTGA</cdnaseq>

Protein Sequence

<aaseq>MTRRCSHCSNNGHNARTCPARGGGGGGGGVRLFGVRLTSPPEVAMKKSASMSCIASSLGSGGGSGGSSPAGTGRGGGGGGEGAAGYASDDPTHASCSTNGRGERKKGTPWTEEEHRMFLMGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYFIRQTNSSRRKRRSSLFDMVPEMPMDESPVVVEQLMLHSTQDEATSSNQLPISHLVKQKEPEFARHLSDLQLRKHEESEFTEPSLAALDLEMNHAAPFKTKFVLTMPTFYPALIPVPLTLWPPNVANVGESGTNHEILKPTPVNGKEVINKADEVVGMSKLTIGDGSSNSIEPSALSLQLTGPTNTRQSAFHVNPPMAGPDLNKRNNSPIHAV</aaseq>

Gene Sequence

<dnaseqindica>1..319#2701..2909#3039..3611#ATGACGAGGCGGTGCTCGCACTGCAGCAACAACGGCCACAACGCGCGGACCTGCCCCGCCCGCGGCGGCGGTGGAGGCGGAGGCGGGGTGAGGCTGTTCGGCGTGCGGCTCACGTCGCCGCCGGAGGTGGCGATGAAGAAGAGCGCGAGCATGAGCTGCATCGCGTCGTCGCTCGGGAGTGGCGGTGGGTCAGGGGGTTCGTCGCCGGCGGGAACGGGAAGGGGAGGAGGAGGAGGGGGAGAGGGCGCGGCCGGGTACGCGTCCGACGACCCCACGCACGCCTCCTGCTCGACGAATGGCCGCGGCGAGCGGAAGAAAGGTTAGATTCCTTTTTTATTCTTTCTTCTTCCTTCTGTAATTCCGTTCAAACATACACTCTAGCTTGCATCCTGTCCATGCTAGCTGCGTGCTCGGTGAAATGAAATTCGGCGACGAGAGGTACAGCTGCGCGCTGTTCATACTCTTCTGCTTGGTGAATCAACTGAGCAAGTAGAAATGCTGCGTTTTGCGTTTGTTTGCTTCTGATTAACGCGTCGCGTTCCATGCACCTACCGCCTCATGGAGCACGCTCGGCTCAGCGAGCGGTAGGAATCTTTTCTATTTTCATTTCTTGCTGCCAAGACAAGGAAAAATATGGGTTTCCTTTTTGTGAAATAAAATATTCTAGTTCGATTGCTTCAGGTATCGCAACTTGTGCGCAAGGAAAACAAAATTTTGTGGTTGAATCGCATAATGTACTGTTCCTTTTAATTTGTCGGTATGTGGTATGTTCCTCTACTTTCACGGATCCTTTATGCAACCAAGATAGCAACATTAAAGATAAGGAAAATCATCAACAGAAACAAAAAGATGTATCCTTTTGATATCAAAGAGTTAAAGACCCAATTTGATTCAAGAAATTAACAAATGATTGACAATTTTGTAGAGAAGATCAAGCTATCTTCTTGTAATGAATTCAATATTTCGGAGACATGTTTTAATAGTCACGCCTCCCTATTTTGTTCGCTAGACTCAAGGTATGGCCGCTATCATTGCTGAAGATGCAATCTATAGGAACCGTCCAGAATGGCCGACACTAATCAACCTAGCTAAATATCTTTTCCCATCTGATTAAGTTACGTGCACATGTGCATCGCAAGAAGACCTGTATAGATCACATTCCGAGAAGGACACTGACTGGCCCGGGCTAAGGACCCCACGTCTCTTTGACCTTTAATTTAATCACCTGATCCTAATGGAATCTAGCCACATTGGTTTCCAGTTGGTTTGACCAGTCCTAGGTGTGCACTATGTACTTTCTTAATGTATTTGGTTTGGTAGTGATATGCTATTTTTTTGGTACATGTAGAAGAGACTTTACTGGCACTTGGCTTCAAAGAAACTGTAGGGGCAATTCCTAGTTTACTTATAGACCAAGCTAGAGCCTGAGTCTGTTTTGATTATTATGAATCAGCTGGCGCTAGTGGTTATGGGATGAAGCCATCTATCTAAAAGAATTAAGAACAAATCTCAAAAGGGAACTCACAATGGAGTTCCCTTGTATGAGCAACATCTTTAGTTGAAACAAAAGCACCTGTCCCTACTACATGACAGCATCATGCTGATTCTGCTGTAAAACTTTATGGCAATGAATTTGCCAATAGTTATTTGTCATGCTTTCTGGACATTCTTTTTACATGGTTAAAAATTGAAAGGCCTTTGAACCGTGAGTGTCCACCACAAGTGCTATGCTGTATTATTTAGTCTATATCCATACTTTCTATGGAGGACTTGCAGCATGTACATCCAAGTTGGGCAGCTTCAGAGCTTAATCGTATTAATGATGAGAGGCAAAGTTATTTTCCTTTCCCCTTTCATATTTTTCTTGTGCTGGAAAAGCCTGCTGCTTGAGCGGTTGATCTTGGTGAACAGAGATTCTAGATTATGCATACCCAGAATTCAACTATGTTACTCCCTCCGTTTCGAAATGTTTGACACCGTTGACTTTTTAGCACATGTTTGACCGTTCGTCTTATTCAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACGGGTGTCAAACATTTTGAAACGGAGGGAGTAGTACTGAATAGAAGGCAAACTTATCTACCCTTTCTTCTTTACAAAGCTATTATTGTGGTTCTGGAGTGTCCATTGTTTGTGAGATGGAATCAGATGAATCAATTATAGACTCATGCATATTATTCTACAGAGAATAGCATTACTGATCTAATATTAAACTCACTAGATTGAGATGCATCAAGGTTGATGGTTATTATATATAAACAAAGTAAGAAACCCAAAGCTTGAGATTGTAGTCAAGCTCAAAAGTAGTGATTGATGCTTTGTCTTTGTTGTAATGAATACATGCTAGTGAATGGGGAGTATTCTGGTGTTAGAGGGAGTATGCTACAGTGCTGGTCCCTGCAGTTCCAGTGTGTTTTTTGGCTGAGCTTGTCATGTACTCCGTAGCTGGAATGATCCAGTGGGTGTAACCCTCGGTGTGTGAGTTGGTTTTACCTCTTTGTTGACCTACTGTTGGCTCTCTGAAAAAGCCAGGTCACTATCAATATAATGATCTTTCCTCTAAAAAAATGGGGTCGTGGATTATTTTTTCACAGAAACCATCTGGGATTTTTCAGTCCAGTTTCAACTCAAGGGCTGATGTTGTGCTTCAGGTACACCTTGGACTGAAGAAGAGCATAGAATGTTTCTAATGGGTCTGCAGAAGCTTGGTAAAGGAGACTGGCGTGGGATCTCTCGTAATTTTGTTGTTTCCAGGACACCAACTCAGGTGGCTAGCCATGCTCAAAAGTACTTCATTAGACAGACAAACTCATCAAGAAGGAAGAGGAGGTCAAGCTTGTTTGACATGGTCCCAGAAATGGTATGCAATTTTTGCTTGCAATTTTCGCTTGAGACAGGAGGTGTCTATTATCTCCATATATGTTAAATTGTGTCCTGATATTTCTATATCACGACCATCTTATGTTCGAATTTCATCTTCAACCTGCAGCCCATGGACGAATCCCCAGTGGTCGTAGAACAGCTTATGCTCCATAGTACTCAAGACGAAGCCACAAGCTCAAATCAATTGCCAATATCACATCTTGTGAAACAGAAGGAACCTGAGTTTGCTAGACACCTGTCGGATTTGCAGCTAAGGAAGCATGAGGAATCTGAGTTCACAGAACCTTCACTAGCAGCACTAGACTTGGAGATGAACCATGCTGCACCTTTCAAGACTAAATTTGTTCTGACAATGCCAACATTCTACCCGGCATTAATACCTGTTCCACTAACTCTTTGGCCTCCAAATGTTGCTAATGTGGGTGAATCAGGCACAAATCATGAAATCCTAAAGCCCACTCCAGTGAATGGAAAGGAGGTGATCAATAAGGCTGATGAGGTTGTTGGCATGTCCAAGCTTACCATAGGTGACGGCAGCTCTAACTCCATAGAACCCTCTGCTCTTTCCCTTCAGCTTACTGGACCGACAAATACAAGACAATCAGCTTTTCATGTGAACCCACCAATGGCTGGACCTGACCTAAATAAGAGAAACAACAGCCCAATTCATGCAGTTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002232