BGIOSGA002239

From RiceWiki
Revision as of 10:33, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA002239| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA002239, complete gene.| tag = P0510F0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA002239

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002239, complete gene.

LocusTag

P0510F03.9

Ensembl Transcript ID

BGIOSGA002239-TA

Ensembl Protein ID

BGIOSGA002239-PA

Length

2885

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:4912586..4915470

Sequence Coding Region

4915229..4915470,4914788..4914931),complement(4913278..4913486,4912586..4912746

Genome Context

<gbrowseImage1> name=IndicaChromosome01:4912586..4915470 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:4912586..4915470 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGACTACCACTTCGTGTACAAGGACGTGGAGGGGGCGAGCACGGAGTGGGACGACATCCAGCGACGCCTGGGGAACCTGCCGCCGAAGCCGGAGCCGTTCAAGCCGCCGGCGTACGCGCCCAAGGTCGACGCCGACGAGCAGCGCAAGTCCAAGGAATGGCTCGACGCGCGGGAGCCCGACGAGCTGGAGGATCTCGAGGACGACCTCGACGACGACCGCTTCCTCGAGCAGTATAGGAGGATGAGGCTTGCAGAGCTTAGGGAGGCAGCAAAGGCCTCGAAATTCGGCTCTATTGTGCCTATCACTGGCTCCGATTTTGTCCGAGAGGTCTCCCAGGCTCCATCCGATGTCTGGGTTGTGGTCTTCCTCTACAAGGATGGAATACCAGAATGTGGGTTGCTTCAGACTTGTCTGGAGGAATTGGCTACAAGATACCCAGCAACTAAGTTTGTTAAAATCATCTCTACGGATTGCATTCCCAACTACCCAGATCGAAATGTCCCTACAATACTTGTGTACAATAACAGTGCCGTTAAAGGGACTTATGTCGGTCTGCAGAAGTTTGGTGGAAAAAGATGCACACCTGAATCTGTTGCATTGGCCCTTTGCCAGTCAGAGCCGGTCCTGAATGATGGGCAGAGCGGCGGTGATTCATCCCGGGACAATGTCATAGAAGGCGTTCGCAGAAAGTTCATCGAAAAGGTTGTCGCCCAGCATGAAGAGCGGGAGGAAGATGACGATAGTGACTAA</cdnaseq>

Protein Sequence

<aaseq>MADYHFVYKDVEGASTEWDDIQRRLGNLPPKPEPFKPPAYAPKVDADEQRKSKEWLDAREPDELEDLEDDLDDDRFLEQYRRMRLAELREAAKASKFGSIVPITGSDFVREVSQAPSDVWVVVFLYKDGIPECGLLQTCLEELATRYPATKFVKIISTDCIPNYPDRNVPTILVYNNSAVKGTYVGLQKFGGKRCTPESVALALCQSEPVLNDGQSGGDSSRDNVIEGVRRKFIEKVVAQHEEREEDDDSD</aaseq>

Gene Sequence

<dnaseqindica>1..242#540..683#1985..2193#2725..2885#ATGGCGGACTACCACTTCGTGTACAAGGACGTGGAGGGGGCGAGCACGGAGTGGGACGACATCCAGCGACGCCTGGGGAACCTGCCGCCGAAGCCGGAGCCGTTCAAGCCGCCGGCGTACGCGCCCAAGGTCGACGCCGACGAGCAGCGCAAGTCCAAGGAATGGCTCGACGCGCGGGAGCCCGACGAGCTGGAGGATCTCGAGGACGACCTCGACGACGACCGCTTCCTCGAGCAGTATAGGTATCGCCTCTCCTAGTCCCTAGGCCTTGATCTTGTCCCCTTTCCTGGTTGATGATGATCCATGAGCCATGATGCTGTCCTGTTCTTCCCGTCAATAGTTGGTGCGTAGTGGGGTGTTTCTTTTTTTTTCTCTCCCTATGATTTGATCCTTAGAGCATGTTCTAACTGGGATAATTCACGTCTTTTTTTTTCTTAGCAACTTGAATACCTGATCTGTTTCTGGTTCTTTGATCTGGATTTGATGCTATATGCAATGGTTTTGGTAAGGCTGGAAGCTTATTGATTTGTTGATTGCAGGAGGATGAGGCTTGCAGAGCTTAGGGAGGCAGCAAAGGCCTCGAAATTCGGCTCTATTGTGCCTATCACTGGCTCCGATTTTGTCCGAGAGGTCTCCCAGGCTCCATCCGATGTCTGGGTTGTGGTCTTCCTCTACAAGGATGGGTATAGTAGAATTATATTATCAATGCGTTATTTGCCTTAACAATTACTGGGTGCATCATCCACACGTTGTTGCGGATCTGGTATGTTTTAGAATTGTAGATATTTATCCAAGAACATGTAACTGTAAGTCTCAGGTAAATTAATCTAAGATATTATTAGTACAGTAAGTTCATGCATGGGCATGTACAGAATGGCTTGGCCTAGTTATTCAATGTGAATTGTGATATTAAAAAACAAGAATTGTGATCGATAGATTATATGATCTAGAAAAACTGGCAAGTTCCTAGACCAAAAGGAACTTGTTAAACAAAACATTGAGTAAAGTTGAATATTCCGTGGTGAAACAAAACATTGATGTAAAAGTTTACCAATTAGTTACTAAATATTTAAGTTCTTTTTATAAAAAAAAATCTGTGGCAGTAAAATAAGTAAATGACTCATATTATCTCGCTATATAGTTCACTGTGTAGCCTAGTAAGGTGAAAAATATGTTTTCACATTGTACTGATACATCAATAATTTCTTGTAAGTAACTGCTTACAGTAAAAACCATAATACCAATCTAAGGCTGCAACCATTCCCACGTTAATCTAATGGCTTGTAGTTTGTTGGCGATGTGGCTCAATAAGAAGTCTTGGTTTGTAGTAAAAAATATGAAGAGATAGATATGCGCCCCAAAAAAGCAGTACTCTTTATTTCATATATATGAGAAGTTGAGCACATAGCACAGAATTGCTCTTGTGTTAATGATTATATGTCCCCCAAAAGAGCAGTACTCTTTATTCATATATATGTGTGAGCAGTTGAGCACATAGCTCATGGAACTGAATTCATAGGAAAAGTTACCTAGGTAGCTTGAAATATGATTTTTCTAGATGTAGGATAAGCACAATTTTATTGTTATTTGAAACCAGAATCTGTTACATAGCTAGATATTTGACATTGATGAAATAGTTTCAAGGATAGTTTGACCATGGATACATGTGATTTATGAACATGACATTATCACTTTACACCTTACTTGGATTCCCTTTTTGCTGGAAGATGAACATGACATTCTCACTTTACACCTACTTTGATTCCCTGTTTGCTGGAAGATGCTGAGCTGTATAGTCGATTAGCCCTTTATCTTGGACTCTTCATTATATCCTTAAACTTCCATGAATTTATATTAATAGTCCTTCCATTTTTTATGCTTTTTACTGTTTCCATAAGTTGCTTATAAGTTTTACAAAAGGTCATCTGGATTCATTAGTGATTGAGATGTTCACTGTCTAAGACTTCTATGAATTTCATTGCAGAATACCAGAATGTGGGTTGCTTCAGACTTGTCTGGAGGAATTGGCTACAAGATACCCAGCAACTAAGTTTGTTAAAATCATCTCTACGGATTGCATTCCCAACTACCCAGATCGAAATGTCCCTACAATACTTGTGTACAATAACAGTGCCGTTAAAGGGACTTATGTCGGTCTGCAGAAGTTTGGTGGAAAAAGATGCACACCTGAATGTAAGTTATGCCACAAAATAAGCATCCAATATCTAATTTGGCATTAATCAGTTTAAGTTTCTCCAGTTATATATTCTGTTGCACACTAGTAGATTCTGTAGGTCTATTTTAGCATTTCCATCAACCAGTCACAGGATGCCATTCACATTTTTCTCCTGGATACTACTGTTAGATGCCTTAATACAAGCAAAATCGTTGACAAATAAAAATGAACACATTTACGATTGTGTCAATAACTCAATATCGACATCCAGTCCCTTTTTAAATTTGTTTCATATTGGCAAATAATTGGTTGATGTCTGCGAAGCAATAGCATGTTAACGACCTAAGTTCATAGTTATACACTGTCTATCGCCATAAAAAATAGTAGCATTTTCTTCCAATAAGAAATGACATGAATGTTTATTACTCGTTTGAATGGCGCAACATTTTTCTGATGTTTGCTTTCAACAAACCAAGAATCCCAGCGTTACTTCAATGTTTATGAATTATCTCCATCTCCTTATACTAAATCGTCACTCTCTGCTTCAGCTGTTGCATTGGCCCTTTGCCAGTCAGAGCCGGTCCTGAATGATGGGCAGAGCGGCGGTGATTCATCCCGGGACAATGTCATAGAAGGCGTTCGCAGAAAGTTCATCGAAAAGGTTGTCGCCCAGCATGAAGAGCGGGAGGAAGATGACGATAGTGACTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002239