BGIOSGA002255

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Revision as of 10:33, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA002255| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA002255, complete gene.| tag = OsI_006...")
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Gene Name

BGIOSGA002255

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002255, complete gene.

LocusTag

OsI_00648

Ensembl Transcript ID

BGIOSGA002255-TA

Ensembl Protein ID

BGIOSGA002255-PA

Length

4334

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:4674068..4678401

Sequence Coding Region

4678113..4678401,4676903..4677049),complement(4676312..4676547,4674068..4675843

Genome Context

<gbrowseImage1> name=IndicaChromosome01:4674068..4678401 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:4674068..4678401 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGTACCTCCTCCTCGCGCCGTCGCCGGCGCCGCGGCCGCTCGCGTTCCGGTGCCGCCGAGGAGGCCGCGCGCGGAGAGGCGCGGCCATCGTCGCGTCGAGCTCGGCGTCGTCGTCGTCGTCGTCCGGTGATGCCGGCCCATCCCACTCGGCGGCGGCGGCGGGGGCGTACGTGCTGGCGCGGCGGGGCGTGCTCCTCGGCGTCTCGGCGCTCCCGCTCCTCCGCGCCAGGGAAGCCGCGGCGGCGGCCGCGGTGGCCACGCCTAACAGCGGGGATCTCGCTACGGTTTATGGCATGTCATTTCCCCAAGGATTTATTAGAAGAAAGCGGGTTGATTTCCCAAGGATAGATCATCAAGCTCAGACTTGCTACAAAACTTTCAAGATTGGACGTAATACTGTCATATGTAGACCTAATGAGGCTATTGTCGATGAGACAAAGGATATTCAAAAGCCTGATGAACCTCAGCCTGGGGAAACTCAGGCTGAATCTCCTCTACCTGAAGCTTTGCAACCAGAATCATCCCTGCCCGTCACGCAAGAACAAACTCCTGGGAATCCACTTTCTGGTCTTTTGAATGCAATTGCAGTTGCTGCCTCCGGTGTTCTTGCTGGACTGTATGGCACTTCTCAACAAGAAAAGAAGGCCCTGGAATCCGTCGTCTCATCTATGGAGAGCAAACTGGCTGAAAATGAGGCAGCAATCTCATTGATGAGGGAAAACTACGAGAAAAGATTGCTGGATCAACAAACAGCACAAAAGAAGCAAGCAATGAAGTTTCAGGAGCAGGAAGCCTCTCTTTTAGATCAGTTGTCTTCAACAAAAAAGACGGTAACTTCGCTAAGTGAAGAATTCAGAAGGGAGAAGACACTGGCTGAGGAGCTTAGGGAAGAAATACGTCGACTAGAGAGCAGTCTTGCACAAGCTGGGGATGACAAAGATGTTCTTGAAGCCAAACTGAAGGAAAAGTTGGGTGATGTCAACATTTTGCAGGAAAAAGTAAGTTTGCTTAGCCAAGAAATTGATAATAAGGGTATACGCATCAGGGAACTCAGTTCATTACTTTCGTCAAAGGAAGCAGACTACCGTAATCTGTGCTCTTTCTCTGACCAAACTAAAGAGAGTCTAGAACTTGCAGAAGCTAAAATACAGCAACTGGAGGAAGAGGTTCATAGAACTAGAAATGATCTTTCTTCTAAGATATCTTCAATTGATTTACTGAATGAGGAACTTCAAGCACTGAACTCTGCAAAGAATGAAGCTGAGGAAAAGCTAAGTGAGTTAACAAAAGATTATACAGACCTGAAGGCTTCTTCTGAAGCAAGAGAGAGCCGCAACTCTGAGCTACTATTAGAAAAAGATAATATGATCAAACAGCTTGATGGAAAACTCTCTGATGCATTAAGTGATTCTAGCAAAGACCGTGAGATCATCGCTGCGCTGAACAAGGAATTGGATGCAACAAAAGCAATGCTAGAGAATGAAGTTGCTGCAGTTAAAAGTTTAAGAGAATCACTTCAATCCACAGAGGAGGCACTGACAGATTCCAGAAGTGAGGTATCCAAACTTTCAGTGGAACTTGATGAAGCAAATAGAATGAACCAGGACCTGGTGCTGCAAATTTCTAAACTCCAGGATGAGTTCAATGAAATGCAAGAGGGCCTTACTAACAAACTAGGAGAGGTAGAATCAGTATCTAAAGCTCTGTCAGACGAACTTGTCTCTGTTAAGGAGATGGTTCACAAGGGACAGGAAGAACTTGAAGCCACTTCTAATGAGCTTGCATCCATTGTGGAAGCTCGTGACAACCTGAAGAAAGAATTGCTCGATGTGTTCAAGAAGTTGGAATCCACGTCACAGGAGCTTGTTGATGAAAGGAAAACTGTCACTACTTTGAATAGGGAGCTTGAGGCTTTGGTGAAACAACTACAGATGGATTCTGAAGCACGAAAAGCTCTTGAAGCAGACCTGGATGAAGCAACAAAGTCACTAGACGAGATGAACAGGAGTGCATTATCACTATCAAAGGAGCTAGAGGAAACTAATTCTAGGAAGGACACTCTTGAAGCAGAGAAAGAAATGTTATCAAAGGCTCTTGCTGAGCAACAGAAGATCACAACTGAAGCTCATGAAAACACTGAGGATGCTCAGAATCTTATCTCTAGGCTTCAGACTGAGAAGGAGAGTTTTGAAATGAGGGCTAGACATCTTGAAGAGGAGTTGGCGTTAGCAAAGGGTGAGATATTGCGCCTAAGAAGGCAGATTAGTACAAGCAGATCACAGAAAGCAAAAACTCTTCCAAACACAAATGCATCTCCAGAGGTCAGTCAGGCTCCAGACGAGCAGCCTGTGAATGATAATCAGAATACCAGCAAAGTTGCTGCTGGGTCTCAATATACTGCAAAGAGGACGACTAGGAGAAGAAAAGGTGGTGCATCAACGTGA</cdnaseq>

Protein Sequence

<aaseq>MGYLLLAPSPAPRPLAFRCRRGGRARRGAAIVASSSASSSSSSGDAGPSHSAAAAGAYVLARRGVLLGVSALPLLRAREAAAAAAVATPNSGDLATVYGMSFPQGFIRRKRVDFPRIDHQAQTCYKTFKIGRNTVICRPNEAIVDETKDIQKPDEPQPGETQAESPLPEALQPESSLPVTQEQTPGNPLSGLLNAIAVAASGVLAGLYGTSQQEKKALESVVSSMESKLAENEAAISLMRENYEKRLLDQQTAQKKQAMKFQEQEASLLDQLSSTKKTVTSLSEEFRREKTLAEELREEIRRLESSLAQAGDDKDVLEAKLKEKLGDVNILQEKVSLLSQEIDNKGIRIRELSSLLSSKEADYRNLCSFSDQTKESLELAEAKIQQLEEEVHRTRNDLSSKISSIDLLNEELQALNSAKNEAEEKLSELTKDYTDLKASSEARESRNSELLLEKDNMIKQLDGKLSDALSDSSKDREIIAALNKELDATKAMLENEVAAVKSLRESLQSTEEALTDSRSEVSKLSVELDEANRMNQDLVLQISKLQDEFNEMQEGLTNKLGEVESVSKALSDELVSVKEMVHKGQEELEATSNELASIVEARDNLKKELLDVFKKLESTSQELVDERKTVTTLNRELEALVKQLQMDSEARKALEADLDEATKSLDEMNRSALSLSKELEETNSRKDTLEAEKEMLSKALAEQQKITTEAHENTEDAQNLISRLQTEKESFEMRARHLEEELALAKGEILRLRRQISTSRSQKAKTLPNTNASPEVSQAPDEQPVNDNQNTSKVAAGSQYTAKRTTRRRKGGAST</aaseq>

Gene Sequence

<dnaseqindica>1..289#1353..1499#1855..2090#2559..4334#ATGGGGTACCTCCTCCTCGCGCCGTCGCCGGCGCCGCGGCCGCTCGCGTTCCGGTGCCGCCGAGGAGGCCGCGCGCGGAGAGGCGCGGCCATCGTCGCGTCGAGCTCGGCGTCGTCGTCGTCGTCGTCCGGTGATGCCGGCCCATCCCACTCGGCGGCGGCGGCGGGGGCGTACGTGCTGGCGCGGCGGGGCGTGCTCCTCGGCGTCTCGGCGCTCCCGCTCCTCCGCGCCAGGGAAGCCGCGGCGGCGGCCGCGGTGGCCACGCCTAACAGCGGGGATCTCGCTACGGGTGAGTGCCATTCTCCTTTCCAGGAGTTGGTTGAATTCCGTTCTCGTTTTGTGTTTCTCCCAGCCTGGATACTATTCGGTCTGGCATTGTGGAGTACCATATGAAATCTGTGTGCGATTTGAATCATTTATGGTTGGGCTTTAAATATTCTGTAATGTCCAATTGTATAGATTGTTTTGTGGATTCAGTCATGGAGATTACTGCTAACGTACAGCGTTGCATTATATGGACGTTTTAGCTCCACATGAGAAATCTGAACTTTCTGTTCAGGTTAATGGTGGAAGAGTTTACAATGTATCTGCTAACAAATGCTGCTAAGCAATTATGTATGCATGGGACAAGCGCAATCGCTTTCCTTGAGCAGGGATACGCATGGATGGAAAGGAATTAGGAGGTTGGAATAGCACAATTCCCACAAGCAGAGACTATTTCTGCAAACATACACATGTTGAATGTGATTCTATATGGACTTCTACATGTTAATACCTCAATTAGCACTAGAGTGGAACTATCAGATGGAAGAATGGACCTAGAATGTCACAGTGATCGTTTGTACTGGTGCAAAAGGTAGAAAGAGTTTGTAAATGCTTTATGCAGTAAGATATTTTTACATGAAGGTGGTCTTGGCTGTAGATGGCTCATCTAAGTAAACTGTACACTTACAGTATATCATCTTACCCTTTGTACCCCTTTTGTATAGGTTTTGTGCAAACAAATTCATTTTCATTCTGTTGACCAGTTTTGAAATGGAACAAATCCACTATTTGAGGTGCAGTGGATGATTTATGATTGCCATTCCATGTGTTAGGCATCCTGAGTACACCACGCGGATTCCCTATGCATTTTGGAACTAGGGATAAGGGAAGTTTTGATAAATTTATAAGCTGAATTTGGCTGGTATTTGCATGGAAGTGTGTTGTTTTAATAAAAATTAATTTCACATTCTGATGACAAAGTCTCAAACTGGAGTCATGCATGCTCATTATTCACAACTTATCCCAGTGAATTTTGAGTCTGATTATGGCATGTGACCATATGTCATTTTTTCTTCATTTTCCCGCAGTTTATGGCATGTCATTTCCCCAAGGATTTATTAGAAGAAAGCGGGTTGATTTCCCAAGGATAGATCATCAAGCTCAGACTTGCTACAAAACTTTCAAGATTGGACGTAATACTGTCATATGTAGACCTAATGAGGCTATTGTCGATGGTCAGAATTTCCCCCTCATACAAGTAGCTCATACTAAATACGGGGTCTATGATTATGTTAGCGAACCCTGTTGAGGTCTACTACCATGTGCTGCATTATTTTTGTTTTCTGGCATAAATACTTTGAGGTGTACCTGCAAAGTTCTTTTGACCTATCTTAACCACTGGAATGTGTTGGATTTACTATATGGTTCTTTTGTAAACTGGTATTGGGACCTGGGCATGTGATATTGTTTGGATTGATTTTGTTGGTGCTGCCTTCCTGTCATCTCATGTTGGCGCTTGCATATTAGGACTAATTTGGAAATATCCTGTACAAACTTGGAATAAATAGTTTATATTGTTTTTCTCTGTAGAGACAAAGGATATTCAAAAGCCTGATGAACCTCAGCCTGGGGAAACTCAGGCTGAATCTCCTCTACCTGAAGCTTTGCAACCAGAATCATCCCTGCCCGTCACGCAAGAACAAACTCCTGGGAATCCACTTTCTGGTCTTTTGAATGCAATTGCAGTTGCTGCCTCCGGTGTTCTTGCTGGACTGTATGGCACTTCTCAACAAGAAAAGAAGGCCCTGGAATCCGTCGTCTCATCTGTAAAACATCTGCAAACCTGTAATTAGTGTCCATTACTACTGTTTCTATTTTACTACTTTTGAAGTGTCCCATGACATCCTTGCATAGTCAAATTTCCACGAAGTAACCATCTTTGCATGCATACACATTAAAGAGTTGTACATTCCGTGATTGCATACATATGCTTGTGTGTTTTGTTTATTTTCTTTTATCTAGAAAATCTGTGCACCCTCAAGTTTATAACCTGATAACTAACAAAGTATAGAACTCATGAAGAGCTTAAAAAGTTTTAACTCATTTTCCGTCATGATGTTTCCCCTTAGGAAAACAAGCGTTGCTTAAGTTCTCACAGCACAATATAACTCAGATTTATATGCAAGAGGCTACCAAAACTATTTGATGTACCTCTCATACTTGAAAACCTTTTTAAAAAATGATGTGCTAATATAGGACATTAGCTGACATATCCATTTTGCTAACTTGTTCAGATGGAGAGCAAACTGGCTGAAAATGAGGCAGCAATCTCATTGATGAGGGAAAACTACGAGAAAAGATTGCTGGATCAACAAACAGCACAAAAGAAGCAAGCAATGAAGTTTCAGGAGCAGGAAGCCTCTCTTTTAGATCAGTTGTCTTCAACAAAAAAGACGGTAACTTCGCTAAGTGAAGAATTCAGAAGGGAGAAGACACTGGCTGAGGAGCTTAGGGAAGAAATACGTCGACTAGAGAGCAGTCTTGCACAAGCTGGGGATGACAAAGATGTTCTTGAAGCCAAACTGAAGGAAAAGTTGGGTGATGTCAACATTTTGCAGGAAAAAGTAAGTTTGCTTAGCCAAGAAATTGATAATAAGGGTATACGCATCAGGGAACTCAGTTCATTACTTTCGTCAAAGGAAGCAGACTACCGTAATCTGTGCTCTTTCTCTGACCAAACTAAAGAGAGTCTAGAACTTGCAGAAGCTAAAATACAGCAACTGGAGGAAGAGGTTCATAGAACTAGAAATGATCTTTCTTCTAAGATATCTTCAATTGATTTACTGAATGAGGAACTTCAAGCACTGAACTCTGCAAAGAATGAAGCTGAGGAAAAGCTAAGTGAGTTAACAAAAGATTATACAGACCTGAAGGCTTCTTCTGAAGCAAGAGAGAGCCGCAACTCTGAGCTACTATTAGAAAAAGATAATATGATCAAACAGCTTGATGGAAAACTCTCTGATGCATTAAGTGATTCTAGCAAAGACCGTGAGATCATCGCTGCGCTGAACAAGGAATTGGATGCAACAAAAGCAATGCTAGAGAATGAAGTTGCTGCAGTTAAAAGTTTAAGAGAATCACTTCAATCCACAGAGGAGGCACTGACAGATTCCAGAAGTGAGGTATCCAAACTTTCAGTGGAACTTGATGAAGCAAATAGAATGAACCAGGACCTGGTGCTGCAAATTTCTAAACTCCAGGATGAGTTCAATGAAATGCAAGAGGGCCTTACTAACAAACTAGGAGAGGTAGAATCAGTATCTAAAGCTCTGTCAGACGAACTTGTCTCTGTTAAGGAGATGGTTCACAAGGGACAGGAAGAACTTGAAGCCACTTCTAATGAGCTTGCATCCATTGTGGAAGCTCGTGACAACCTGAAGAAAGAATTGCTCGATGTGTTCAAGAAGTTGGAATCCACGTCACAGGAGCTTGTTGATGAAAGGAAAACTGTCACTACTTTGAATAGGGAGCTTGAGGCTTTGGTGAAACAACTACAGATGGATTCTGAAGCACGAAAAGCTCTTGAAGCAGACCTGGATGAAGCAACAAAGTCACTAGACGAGATGAACAGGAGTGCATTATCACTATCAAAGGAGCTAGAGGAAACTAATTCTAGGAAGGACACTCTTGAAGCAGAGAAAGAAATGTTATCAAAGGCTCTTGCTGAGCAACAGAAGATCACAACTGAAGCTCATGAAAACACTGAGGATGCTCAGAATCTTATCTCTAGGCTTCAGACTGAGAAGGAGAGTTTTGAAATGAGGGCTAGACATCTTGAAGAGGAGTTGGCGTTAGCAAAGGGTGAGATATTGCGCCTAAGAAGGCAGATTAGTACAAGCAGATCACAGAAAGCAAAAACTCTTCCAAACACAAATGCATCTCCAGAGGTCAGTCAGGCTCCAGACGAGCAGCCTGTGAATGATAATCAGAATACCAGCAAAGTTGCTGCTGGGTCTCAATATACTGCAAAGAGGACGACTAGGAGAAGAAAAGGTGGTGCATCAACGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002255