BGIOSGA002278

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Revision as of 10:33, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA002278| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA002278, complete gene.| tag = OS01G01...")
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Gene Name

BGIOSGA002278

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002278, complete gene.

LocusTag

OS01G0175600

Ensembl Transcript ID

BGIOSGA002278-TA

Ensembl Protein ID

BGIOSGA002278-PA

Length

5176

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:4352912..4358087

Sequence Coding Region

4358024..4358087,4357726..4357796),complement(4357511..4357653,4357311..4357393),complement(4357005..4357197
,4356783..4356921),complement(4356543..4356708,4355630..4355796),complement(4355332..4355505
,4354767..4354862),complement(4354562..4354678,4353943..4354268),complement(4353512..4353779
,4353279..4353407),complement(4352912..4352971

Genome Context

<gbrowseImage1> name=IndicaChromosome01:4352912..4358087 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:4352912..4358087 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCAGAAGTTCGAATTACAAATTACAAATGCTAATTATGGTACACCAAAAATGTTGCAATGTAGAATACACAAGGAGCGCATCTTTATATTAAGAGGAGTAAAAGTCTGTACAGATCCAAAACAAAAACAGAAGGCTTGCAGCTTCTGGTTAGTGTTGAGGGGAGTTCAGCTGATGGATCTACTAAAGACTCCCTTTAAGGGTGTCGTCGCTGATATCGAAGGCCGAGCAGCTTGGTACAAGCATGATTGGCTCGAGGGATTCTACTCTGGCTTCAGGATATTGGCACCTACTATGTATATATTTTTTGCCTCCGCCCTCCCAGTCATAGCCTTCGGAGCGCAACTGAGCAGAGAAACAAATGGTATACTCACCACAGTAGAAACACTGGCATCTACTGCAATATGTGGCATCATCCATTCCATTCTTGGAGGGCAGCCTCTGTTGATAGTTGGAGTTGCAGAGCCAACTATAATCATGTACACGTATCTCTACAACTTTGCCAAGAACCAGCAAGCTCTGGGGGAACGACTGTATTTAGCATGGGCTGGATGGGTCTGCATCTGGACTGCGATCATGTTGTTTCTTCTAGCAATGTTCAATGCTTCCAATGTTATTAGCAGGTTTACAAGGGTTGCAGGAGAACTTTTTGGGATGTTGATCACTGTTCTGTTCCTGCAACAAGCTATTAAAGGAATTATAGAAGAATTCAAGGTGCCTGGAGGTGTCGACCATAGTTCGCCTATATATCGATTCCAGTGGTTGTATGTCAACGGCCTACTTGGTGTAATCTTTTCAATTGGGCTGTTATACACTGCATTAAGGTCAAGAAGGGCAAGGTCATGGGTGTATGGTCAAGGGTGGCTCAGAGGCTTCATTGCTGATTATGGTGTCCCACTTATGGTGATTGTTTGGACAGCATTATCGTACGCATTACCAAAGGATGTTCCTTCAGGAGTTCCTAGGAGGCTGTTCAGTCCACTTCCCTGGGAGTCAAGTTCACTGCATCATTGGACCATAGCAAAGGACCTGTTTTCTGTTCCCCCAGCATACATATTTGCTGCCATTCTGCCAGCTTTGATGGTTGCAGGACTTTACTTCTTTGATCATAGCGTGGCTTCACAATTGGCGCAACAAAAGGAGTTTAACTTGAAGAAGCCCTCTGCTTACCATTATGACATTTTGGTCCTCGGATTCATGGTCCTGCTTTGTGGTTTGATTGGCATCCCTCCATCTAATGGAGTACTTCCTCAGTCTCCGATGCATACAAGAAGTCTTGCTGTCCTTAAGGGGCAGCTGCTACGCAAAAAGATGGTTCAAACTGCCACAGAAGGCCTGATGAATCGTGCTAGCAGTTTGGAAATCTATGGCAAGATGCAAGGGGTTTTCATTGAGATGGACTGTGAAAAAAATACTGATTCTGTTGACAAGGAGTTAAAGAGCTTGAAGGATGCTATGCTGCATGAAGGTTTTGATAAAGAAGATAAATTGGCTGAAGAATTTGACCCTAAAAAACATATAGAAGCCCATTTGCCCGTTCGAGTGAATGAGCAGAGACTGAGTAACTTGCTGCAATCCTTACTAGTTGGTGCTTGTGTTGGGGCTATGCCAGTTATCAAGATGATACCGACATCGGTCCTCTGGGGTTACTTTGCGTACATGGCCATTGACAGTCTACCTGGCAACCAGTTTTGGGAAAGGATAAGACTTATGTTCATCCCATCAAGCCGACGCTACAAGGTTCTGGAGGGTCCCCATGCCTCTTTCATGGAGTCAGTGCCTTCAAAAACAATTACTGTCTTCACGATCTTCCAGTTGGTTTACCTCTTGATATGCTTCGGCATAACATGGATACCAATAGCAGGGATCCTGTTCCCTCTGCCATTCTTCCTTATGATTCTTATCAGGCAGCATGTCCTCCCTAAGTTTTTTGAGCCAAATGACCTTCGGGAATTGGACGCAGCTGAGTATGAAGAGCTTGAAGGTGTCCACCACGATCACACGCTGGAGGATGGTGCATCTGATTCAGGAAGCTGTGGCAGCCGTGACGATGCCGAGATATTAGATGAGCTGACAACTAACCGTGGAGAGCTAAAGCACAGAACTTTCAGCCACCGTGAAGAAAGGCACCTGCAGGCGCATTCAAACGCCGTTCAGCCCAGGTGTGGAGATACAGAAAACTGGTCCGAGTGCTAA</cdnaseq>

Protein Sequence

<aaseq>MQKFELQITNANYGTPKMLQCRIHKERIFILRGVKVCTDPKQKQKACSFWLVLRGVQLMDLLKTPFKGVVADIEGRAAWYKHDWLEGFYSGFRILAPTMYIFFASALPVIAFGAQLSRETNGILTTVETLASTAICGIIHSILGGQPLLIVGVAEPTIIMYTYLYNFAKNQQALGERLYLAWAGWVCIWTAIMLFLLAMFNASNVISRFTRVAGELFGMLITVLFLQQAIKGIIEEFKVPGGVDHSSPIYRFQWLYVNGLLGVIFSIGLLYTALRSRRARSWVYGQGWLRGFIADYGVPLMVIVWTALSYALPKDVPSGVPRRLFSPLPWESSSLHHWTIAKDLFSVPPAYIFAAILPALMVAGLYFFDHSVASQLAQQKEFNLKKPSAYHYDILVLGFMVLLCGLIGIPPSNGVLPQSPMHTRSLAVLKGQLLRKKMVQTATEGLMNRASSLEIYGKMQGVFIEMDCEKNTDSVDKELKSLKDAMLHEGFDKEDKLAEEFDPKKHIEAHLPVRVNEQRLSNLLQSLLVGACVGAMPVIKMIPTSVLWGYFAYMAIDSLPGNQFWERIRLMFIPSSRRYKVLEGPHASFMESVPSKTITVFTIFQLVYLLICFGITWIPIAGILFPLPFFLMILIRQHVLPKFFEPNDLRELDAAEYEELEGVHHDHTLEDGASDSGSCGSRDDAEILDELTTNRGELKHRTFSHREERHLQAHSNAVQPRCGDTENWSEC</aaseq>

Gene Sequence

<dnaseqindica>1..64#292..362#435..577#695..777#891..1083#1167..1305#1380..1545#2292..2458#2583..2756#3226..3321#3410..3526#3820..4145#4309..4576#4681..4809#5117..5176#ATGCAGAAGTTCGAATTACAAATTACAAATGCTAATTATGGTACACCAAAAATGTTGCAATGTAGTAAGCACAAATTAATTACGTATACTGCAAACTTTGCATACGTATTAACATCAAGCGTGCATTTTGTGATGATTGTAAGTTTGGTCCGTGGTTTCTCTCAATTTGACTCATCTGGGTAGCTTGACACCTTAACCTGAGTTTGTAAATTTTGTAAATGGTGGCTTCTGAAAATGTGTATGCCAATATGTGTGTCTTCAAACTACTACTACGTATGTAATTTTTTTTAGGAATACACAAGGAGCGCATCTTTATATTAAGAGGAGTAAAAGTCTGTACAGATCCAAAACAAAAACAGAAGGTGACAGGAGAACATGAGAGTTTGAAGCGCGCCAAAGGCTAATACATTTCTGAATTTTAAGTACTGTTGCAGGCTTGCAGCTTCTGGTTAGTGTTGAGGGGAGTTCAGCTGATGGATCTACTAAAGACTCCCTTTAAGGGTGTCGTCGCTGATATCGAAGGCCGAGCAGCTTGGTACAAGCATGATTGGCTCGAGGGATTCTACTCTGGCTTCAGGTTAATTTTGTTTCAAACAATTAATTTTGCAGTAGACCACTGTGTTTGTTTTCCCTCCTCTTGTTGCTGTCAGTTTCATTCCTTAATCATTCATGCTGCGTCTGGATGTATCGTCAGGATATTGGCACCTACTATGTATATATTTTTTGCCTCCGCCCTCCCAGTCATAGCCTTCGGAGCGCAACTGAGCAGAGAAACAAGTAAATGCCTACCCTCTTGCCACTATGAGCCATACTACAGTTGTGCTCTTTTTGGAATTGCTGTCCTTAGGCTTTAATCACATCTCTAACAAAGGGAAAGTGGTTCATTTCAGATGGTATACTCACCACAGTAGAAACACTGGCATCTACTGCAATATGTGGCATCATCCATTCCATTCTTGGAGGGCAGCCTCTGTTGATAGTTGGAGTTGCAGAGCCAACTATAATCATGTACACGTATCTCTACAACTTTGCCAAGAACCAGCAAGCTCTGGGGGAACGACTGTATTTAGCATGGGCTGGATGGTAACAACTGAAACAAAATACTATCATGTTAGCTTTTCAAGAAATTTTTTTTAATTCTATCCTGATTTGCCTACTGTTGACAGGGTCTGCATCTGGACTGCGATCATGTTGTTTCTTCTAGCAATGTTCAATGCTTCCAATGTTATTAGCAGGTTTACAAGGGTTGCAGGAGAACTTTTTGGGATGTTGATCACTGTTCTGTTCCTGCAACAAGCTATTAAAGTATGCTATTTCTAGCGAGCTCAGTGCTTTGTATCTTGGAAGAAAATATTTAGACCTGTGCCTATTTATTGCAGGGAATTATAGAAGAATTCAAGGTGCCTGGAGGTGTCGACCATAGTTCGCCTATATATCGATTCCAGTGGTTGTATGTCAACGGCCTACTTGGTGTAATCTTTTCAATTGGGCTGTTATACACTGCATTAAGGTCAAGAAGGGCAAGGTCATGGGTGTATGGTCAAGGTTGGTCACTTTTTCATCTTACTTTTATCTCATTGTGTCCAATTTAGCGGGCAAGCTGGTCATCAAATTAGCAATAGCTGTTCCATTAATCATCCATCCAACCGTTAGATTTATGCCAAACATTTCTTTTGCTGTTTTGAAGTTTGGACTGGGCCCAGGGGCGGATCCACAATGGGGGTGGAGGGGTCTTGAGACCCCACTACCGCCCCCGGGACAGTGGAGACCCCCCTAAGCCCCCACTAATTTTTTTCCCATAGATTCATAGGATATGGGGATTGGAGGTTCAATTTATACTGATGTACTTTATTCAGCCCCCACTACTATATTTTTCTAGATCCGCCCCTGACTGGGCCTACTTTAGATCAGGCGTAGGTTGGGCTGGGCTGCAAGCTTGTGTTGTGTCAGCCTGTCAGCTTTGGGGCAAACCATATGGACTCCTTTTTTTTCCTTATCGAGTGGATGGCTTGGCTTGAGATGGTGTTTAGTAGCCCATATCGACAGATTCTTATTCTGCACAGTGTTTTTTCCTCTTTGAAATTTTTAACATTTAGAAACAAAAACAAGAAATTACTACTATCTTCTCTATTAAATACGCAAAGCTTTTGCCATCTTTCAAGTAAAAAGAGAATAAATTACTACTATGTATGCTACATCAGCATGTAAATGATTCCATGACGACATTTTATAACCATTGAGAAGCACATGTACATGAACTGATCATTGTGCGTTTGAGTTGACACTTGCAGGGTGGCTCAGAGGCTTCATTGCTGATTATGGTGTCCCACTTATGGTGATTGTTTGGACAGCATTATCGTACGCATTACCAAAGGATGTTCCTTCAGGAGTTCCTAGGAGGCTGTTCAGTCCACTTCCCTGGGAGTCAAGTTCACTGCATCATTGGACCATAGCAAAGGTAATAAATCAAACTTGCTTGTGATACTGGAGATGTGAATATTTATGGTCTTCAGGTTTAGAATTTTGGTATAGCTTATTTTGCATGGCATCATTGATAATATCTTTGGTTTTTTTATTTCCAGGACCTGTTTTCTGTTCCCCCAGCATACATATTTGCTGCCATTCTGCCAGCTTTGATGGTTGCAGGACTTTACTTCTTTGATCATAGCGTGGCTTCACAATTGGCGCAACAAAAGGAGTTTAACTTGAAGAAGCCCTCTGCTTACCATTATGACATTTTGGTCCTCGGATTCATGGTATGTGCCATGGTTCTATGATAAATTTATCTGCTTATACCCGTCTAAAAAAATTATCTGCTTATGGCGGCCCTTCTTAAGTTTTTTTTCTCTCGGCTAACTAGGAACCTAACATCTTTTGGTCCTGAAGTGAACAATTCATTTCTCTATCACTTCTAGCCTAAAACTAGCCAAAATCTTTTAGTAGTCTTATGAATATGAAATATTTCTGTTCAAAAAAGTGAATAAGAAATATTCTCATATATTTTAAAGTAGAGTTGGTATTTGTTACAACAATTGAATGGGTATGATTGAAAATCCAACATCCATAATATCTTATATTCTTTTTTGCGTGATTATAACCTGGCACTACTGCAATGTACAAGGTGATGGCTGATAGGAGTATAGGACACTGATTCTGCTTTGTGGTGTAATAGACCAAGGCTGTGACATGCTCCTCTTCTCATATAGTAGTATAAAAATGATGCAGGTCCTGCTTTGTGGTTTGATTGGCATCCCTCCATCTAATGGAGTACTTCCTCAGTCTCCGATGCATACAAGAAGTCTTGCTGTCCTTAAGGGGCAGGTTGGTGAACTTCAGACCGAAGTGTTTGTTTGCTACAATATCCATGTTTGCTCATCAGCTCACCCATCTTCTTCCTTTGTTTGCTTAGCTGCTACGCAAAAAGATGGTTCAAACTGCCACAGAAGGCCTGATGAATCGTGCTAGCAGTTTGGAAATCTATGGCAAGATGCAAGGGGTTTTCATTGAGATGGACTGTGAAAAAAATGTGAGTATGTACTCTTCATTACTGATGTATGTTACCATATAATTTCCTCTTCCATTTATTTGTTGCATTTTACTTCTATTGTCAATGCCAGTTCCTGTCAAAATTACTACATCAGTTGTCAAGAAAATTAGTCCTAAGCTCATGTAATTGCCTGAACACCTTACTTTTCACCTTACGAGGAGTGCCCATACTTTTGGTTTTCTTTCAGTAACTATTCAAAATGTAGATGCCACTGTTCTTGTATGGAAAATGTTCAGGTAAATCAACTTATAGGTCAAAAAATTGTCCTGCAGACTGATTCTGTTGACAAGGAGTTAAAGAGCTTGAAGGATGCTATGCTGCATGAAGGTTTTGATAAAGAAGATAAATTGGCTGAAGAATTTGACCCTAAAAAACATATAGAAGCCCATTTGCCCGTTCGAGTGAATGAGCAGAGACTGAGTAACTTGCTGCAATCCTTACTAGTTGGTGCTTGTGTTGGGGCTATGCCAGTTATCAAGATGATACCGACATCGGTCCTCTGGGGTTACTTTGCGTACATGGCCATTGACAGTCTACCTGGCAACCAGTTTTGGGAAAGGATAAGACTTATGTTCATCCCATCAAGCCGACGCTACAAGTAATATCTCTATCTGCATCTGTTTACCTCATTTGAACAATGAAATTGCATGCTTGACTACTTGAGGTGCAGCCTATGTGCCTCCTTTTGGATTAATCGTAAGATAATCCATTTTTTGTCAAAACAGTGGTTAACAGCTCACACTATGCTTCAACATTTGCAGGGTTCTGGAGGGTCCCCATGCCTCTTTCATGGAGTCAGTGCCTTCAAAAACAATTACTGTCTTCACGATCTTCCAGTTGGTTTACCTCTTGATATGCTTCGGCATAACATGGATACCAATAGCAGGGATCCTGTTCCCTCTGCCATTCTTCCTTATGATTCTTATCAGGCAGCATGTCCTCCCTAAGTTTTTTGAGCCAAATGACCTTCGGGAATTGGACGCAGCTGAGTATGAAGAGCTTGAAGGTGTCCACCACGATCACACGCTGGTATACATTTATCTCCCATTCTTGGACAGTGATGATTGTGTTTCACTCTTCAATTCTCCGATGCTCCATCTCTGTTGTTAATCTGAATATTTTGTTCCACACAGGAGGATGGTGCATCTGATTCAGGAAGCTGTGGCAGCCGTGACGATGCCGAGATATTAGATGAGCTGACAACTAACCGTGGAGAGCTAAAGCACAGAACTTTCAGCCACCGTGAAGAAAGGCACCTGCAGGTAAACTATTGGCATGAACAATATTGCGCCGAATGTGCACGGGATTAGAGATGAGATGATACAATGTGTGGCCTTACAATTTGCTCTCTATCTCTTCTATCAGCGTCACTGCTAGCCAGGCTTGTTGAAATATCGATCTCTTTCTTTCTTTCTTTTTTACGGAAGATGAAATACCACGCACGATTTGTTGTACTTTCTGCCTGAAAAATGGCAAATTCAAAATTCTCTTGCGTTAAGCGCTTTCATGTCATCCCTTTTATCTTTTTTATATATTTGAGTTTGACAAATGTTGGTCTCCATCATGCAGGCGCATTCAAACGCCGTTCAGCCCAGGTGTGGAGATACAGAAAACTGGTCCGAGTGCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002278

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA002278&oldid=40002"