BGIOSGA002281

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Revision as of 10:34, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA002281| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA002281, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA002281

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002281, complete gene.

LocusTag

OSJNBA0089K24.29-2

Ensembl Transcript ID

BGIOSGA002281-TA

Ensembl Protein ID

BGIOSGA002281-PA

Length

3916

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:4327390..4331305

Sequence Coding Region

4331291..4331305,4330560..4330719),complement(4330217..4330333,4329952..4330054),complement(4329343..4329379
,4329147..4329216),complement(4328914..4329018,4328350..4328500),complement(4328178..4328260
,4327557..4327650),complement(4327390..4327480

Genome Context

<gbrowseImage1> name=IndicaChromosome01:4327390..4331305 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:4327390..4331305 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACTTAGAGCAACCAAGGGCTCCCCCAATCTCGTACAGTTCCACTGTTCCATTTGTGGCGCCACCGGGGCTCTCTGCCACCGCCATCACGCGCTCATGTGGCGCAGCGCAGCGCAGTGGTGGTGGTGGTGGTGCCCTCCTCCTCCTCCTGCTCGCTCCTCCTGCGATCTCTGAGTTGGGTGGTGGAGCGAGCGTGGCCGCGAGGGGACGCGGAGGGGCGGCGGCGGCGGCGGCGGCTATTGTTCGCGGGATGAGCAGCTTCGGTGGCACCAGCTCCGTCGCCTCCGGTGGTGGGAAGAGGCTCGAGTACGGGCGGACGCATGTCGTGAGGCCCAAGGGCGCGCACAAGGCCACCATCGTCTGGCTCCACGGCCTCGGGGACAACGGAGCCAGCTGGTCTCAACTACTGGAAACCCTTCCCCTTCCCAATATAAAATGGATTTGCCCCACCGCGCCTACAAGGCCGGTGGCAGTGTTTGGTGGGTTCCCATCAACTGCGTGGTTTGATGTTGCTGATCTTTCAGAAGACGCTCCTGATGATGTTGAGGGATTGGATGCCTCAGCTGCACATGTTGCAAACTTATTATCAACTGAGCCCGCTGACATTAAACTTGGTGTTGGTGGCTTTAGCATGGGTGCTGCCACTGCCCTTTACTCTGCAACCTGCTATGCTCATGGAAAATATGGAAATGGTAATCCATATCCTGTGAACTTAACTGTGTCTGTTGGTCTCAGTGGCTGGCTTCCTTGTGCCAGGTCTTTGAAGAACAAAATTGAAAGCTCGCAGGAGGCTGCACAAAAGGCTTCATCCATACCTCTTTTGCTTTGTCATGGAAAAGCTGACGATGTAGTTCTCTACAAACATGGTGAGAAATCTGCTGACGCACTGAAGACAACTGGATTTTCAAATGTGGTGTTCAAGTCCTACAACAGACTTGGACACTACACTGTTCCGGAGGAGATGGATGAAGTCTGCAAATGGCTGACCGCGAACTTGGGGGTCAGCAGCTCATCGTCGGCTTGA</cdnaseq>

Protein Sequence

<aaseq>MDLEQPRAPPISYSSTVPFVAPPGLSATAITRSCGAAQRSGGGGGALLLLLLAPPAISELGGGASVAARGRGGAAAAAAAIVRGMSSFGGTSSVASGGGKRLEYGRTHVVRPKGAHKATIVWLHGLGDNGASWSQLLETLPLPNIKWICPTAPTRPVAVFGGFPSTAWFDVADLSEDAPDDVEGLDASAAHVANLLSTEPADIKLGVGGFSMGAATALYSATCYAHGKYGNGNPYPVNLTVSVGLSGWLPCARSLKNKIESSQEAAQKASSIPLLLCHGKADDVVLYKHGEKSADALKTTGFSNVVFKSYNRLGHYTVPEEMDEVCKWLTANLGVSSSSSA</aaseq>

Gene Sequence

<dnaseqindica>1..15#587..746#973..1089#1252..1354#1927..1963#2090..2159#2288..2392#2806..2956#3046..3128#3656..3749#3826..3916#ATGGACTTAGAGCAAGTTTAATAGGATAACCTACTACTCCCTTTAATTCATTTATAGCCAATCTATATAATAGTTACTTATTATAATATTAATATATGATCTTATTTTTCATACACACATCACGTCTTGAAATCCGTTCTACAGCTGGATACATATTTATAGTCCGCTGCTATTCTCTCTCATATTTTATCTTATTAAAATATGTTTATAGCTGTCTAATAGCTTGCTATTGTACCTGATCTCTACGAGTACTACTACTTATTACCGATCCCCACAATAAACAAATACCACGGCGCGGGACCACCACCGAACCCACGGCCAGCAAAAACAACACACAGCAACAGACCTACCATATCGCGAGAAGGCCCCCAGCGTCGCGGAGCCGAAGGATCAGGACTCACTCGGCCCTCGCCTCGTCGACCTCGTCGCCGGCCGCCGCATCACCACCGACACCTCCCCCCATCGCCGCCGGCGAGGTGCGCGCATCCTCCCCCTCCCTTCTCTCGCTCTCTCTCGCGCGGCCAATCGGGCGCCGGGTCGGCTGTTTTTTTTTTTTGTTTTTTGTTTTTTTGCCGAATCCGTGCAGCCAAGGGCTCCCCCAATCTCGTACAGTTCCACTGTTCCATTTGTGGCGCCACCGGGGCTCTCTGCCACCGCCATCACGCGCTCATGTGGCGCAGCGCAGCGCAGTGGTGGTGGTGGTGGTGCCCTCCTCCTCCTCCTGCTCGCTCCTCCTGCGATCTCTGGTAGATTCCCTACTCCACGCACTCCCACGCGAGAGAACCAGGAAAAGTTGCTCCCCTTTCCGCCGCCCAAATCCGCCTTTCCCCTTGTATCGCGTCGCGTCGCGTCGGGTCGCCACTGCCACTTCCACTTCTCCCCCCTCGTACGCACGCGCGCTCGCCTCTCCTTTATCTGGTGGTGGTGGTGGTGTTTGGGTTGTCACCGTGGTATTTTTTTTTTTGTTTGCAGAGTTGGGTGGTGGAGCGAGCGTGGCCGCGAGGGGACGCGGAGGGGCGGCGGCGGCGGCGGCGGCTATTGTTCGCGGGATGAGCAGCTTCGGTGGCACCAGCTCCGTCGCCTCCGGTGGTACGTTTCGTTCCATTGATCGGGATTGAATCGTGAAATGGGATGGGATGGGATGGGATTGATGCTGTGATCTGATTTGCGTTCTGATTTTGATTCGAATGCGTTTGGGGGGATTTGGGATCGAATCGTGAAATGGGGGTGGGATTGGATGGTTGGATGCAGGTGGGAAGAGGCTCGAGTACGGGCGGACGCATGTCGTGAGGCCCAAGGGCGCGCACAAGGCCACCATCGTCTGGCTCCACGGCCTCGGGGACAACGGAGCCAGGTACGCCACCCCCTCCTCCCCAATTCCGCCGCCGTCCATCCTCTCTCTCTCTCTCGTCGCGATCGATCCTCTCGTTGTGATCGATGCGCTATTGCGCTTATCGGATTCGTAGATGAACAATAGCCAACGCACTTTTTTTTTCCAACTGTCAACAAATAACTGTCAATTTATTGACATCAGGGCATCCGGTTAGCTTACTGCCAAATGCCAACGATGGCAGTTTCTCATTGTCAATTTTCCTTTCTTATAGCCCCACCTGATTGCTCAAGTAATCTGATTGGAGTAGTGTACCGTGTACACAAATATCCTGCTCTGTTTATGTTGGAGTGATTTTTCTGATGGTTTTTTTCCCAAATTCCATCACCACTGTACTATCTTGTTAACACGCACAAGATTTATTAGTATTGGTGAAAGAGGTAGATTGTATGAAACCACGCTTAGATGATAATAACTCTGATTGTGACGTGCAAAGCTTTCGTGCGTTCGAAAAAAAAAAACTCTGTACTGCATCATTACAAGTTAAAATTTGGGAGATACCCATATAAACAATGGATTTTATGTCATGTTTGCAGCTGGTCTCAACTACTGGAAACCCTTCCCCTTCCCAATGTAAGTTTGGACATAGATTTCAAATGTCTATCCTACTCCAAGTTGTTCTTGTGATTATTTTCTTTGTGTATACATCACTAAATCCAGTAGCTTTCCCCCCTCATAGCGTATTTTGTATAACTGCAGATAAAATGGATTTGCCCCACCGCGCCTACAAGGCCGGTGGCAGTGTTTGGTGGGTTCCCATCAACTGCGTGTAAGTTTCATATTTTGTCTAATTTCCTCCTTTCCTCTTGGTCATACTTCTACCAACCTTTCGGAATTGCTCTGGTATGCATGTACTGGTATTCCATACATAACTTTGACCTTTTTTTGAATTTGTAGGGTTTGATGTTGCTGATCTTTCAGAAGACGCTCCTGATGATGTTGAGGGATTGGATGCCTCAGCTGCACATGTTGCAAACTTATTATCAACTGAGCCCGCTGACAGTATGGTTCCCGAGTTATTCTCCAGTTTTTTTTTTTTTTGACTAAAGTTATTCTCCAGTTTTTTCATTTATTTCGTCATAACATGATCTTTTTAACCTACTTTGTCAAGCAAATGCGACACATGAGATCACATATGTTTCTTTTGTGAATATGGCGTATGACATGGAAAGAAGCTATGCGAGAGAATTAAATAACTACCCAGCCACCAGGGATATCAAAGCTAAAAACTTTATCTCCTATGTAGAACTTTGTCAAAAAAGGGATGTACTGTGGAGCTCACACATTATTCCCCAGAAACAAACTAATTTGACCTCTTAAATTGATAATGCAACAGACAGAGGCCCCGCAATAATGCAACACTCAGACCAGCCTTTATCTCTTAACATTTTGTCCTATCACATTGACCATTGCAGTTAAACTTGGTGTTGGTGGCTTTAGCATGGGTGCTGCCACTGCCCTTTACTCTGCAACCTGCTATGCTCATGGAAAATATGGAAATGGTAATCCATATCCTGTGAACTTAACTGTGTCTGTTGGTCTCAGTGGCTGGCTTCCTTGTGCCAGGTTTGTCCTAGTATGTTCACGTGTTTAGGTATCATTGAAATTTCTGCCCTGTAAATGATATTGACTGATATACTTGTTGGTCACCACAGGTCTTTGAAGAACAAAATTGAAAGCTCGCAGGAGGCTGCACAAAAGGCTTCATCCATACCTCTTTTGCTTTGTCATGGAAAAGGTGCATAAACTATTCTATGACCTTCATTAGTATATTAAGTTTCTGTTACATGTTACATTTATATGTAATGGCATAACCAAATCAGTTGGCATTGTTCTAGCATTCAACTTGAGGTAGTTTGGGGTTTATACTTGTATCGTTGCTCTATGCTAGCTGAAGGCATAACCTACTATACCAGGTTCTGAGTTTTGACAATAGCATGGCACTATTCCTAGGAAAGAAAGGCTACACGAAATTCGTATAATCCACAGCCAAAATTTGAATTTGGAATGTTAATTTTAAATTAATATAGGTGTTTTTCTTTATCGTTTTCTATTATTCATATGACAGATGTTCACAATGTGTGCTAACATCTCACTGAATGGGAGGTCATAGTTATTTAGTGGCATATGTAAGGATTTTTCTCACCAACTGTGAAACCGATATATGCTCTCACCATCTACCATCTGATTGGCATATAAGGAATTACTCCCAGAAAACAAACCATCCATCCGAATTATTTAGTGTTTTGTTTTGATTCTATGCAGCTGACGATGTAGTTCTCTACAAACATGGTGAGAAATCTGCTGACGCACTGAAGACAACTGGATTTTCAAATGTGGTGTTCAAGTCCTACAACAGGTTTGATGCCCCTCCCTATTTACTTATTTAACGTACCAATTCTAATCACTTACATGCTGGTTGCTCCCTCTTGAAGACTTGGACACTACACTGTTCCGGAGGAGATGGATGAAGTCTGCAAATGGCTGACCGCGAACTTGGGGGTCAGCAGCTCATCGTCGGCTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002281

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA002281&oldid=40005"