BGIOSGA002288

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Revision as of 10:34, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA002288| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA002288, complete gene.| tag = OsI_005...")
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Gene Name

BGIOSGA002288

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002288, complete gene.

LocusTag

OsI_00597

Ensembl Transcript ID

BGIOSGA002288-TA

Ensembl Protein ID

BGIOSGA002288-PA

Length

3582

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:4251257..4254838

Sequence Coding Region

4254719..4254838,4254597..4254639),complement(4253856..4253931,4253136..4253190),complement(4252941..4253011
,4252805..4252856),complement(4252586..4252663,4252250..4252339),complement(4252082..4252160
,4251436..4251818),complement(4251257..4251364

Genome Context

<gbrowseImage1> name=IndicaChromosome01:4251257..4254838 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:4251257..4254838 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGCTGCTGCTTCGTAGGCTCGCCGGGACCCACCGCGGCCGCGTGCCTCTGGCCGCCGCCGCCGCCGTCACCGGTGGAGCGGCGCTCTTCTGCGCCTCGTCTCCCCCAACCATCGCGCTCATGGAGGAGAAGGGCGAGGATGCCGCTGCTAAAGTTGCGCTTAACCCAGACAAGTGGCTAGAGTTCAAGCTCCAGGAGAAGGCAACAGTTAGCCACAATTCACAATTATTTAGGTACACACCTATCTCTGATCCAGATTCTAAAGGATATTTTGACCTGCTAATCAAGGTTTACCCTGATGGGAAAATGAGTCAGTATTTCGCAAGTCTGAAACCAGGAGATGTTGTTGAGGTCAAAGGGCCCATTGAAAAGCTCAGATATAGCCCAAATATGAAGAAACAAATTGGCATGATCGCTGGTGGGACTGGCATAACACCAATGCTGCAGGTTGTCAGGGCTATCCTAAAAAACCCTGATGACAACACTCAGGTTTCCTTAATTTATGCCAATGTGTCACCAGATGATATCTTGCTGAAAAGGGAATTAGATAGACTTGCCAGTAGCTATCCTAATTTCAAGGTATTCTACACGGTGGACAAACCATCAAATGACTGGAGGGGTGGTGTTGGCTACATATCCAAGGACATGGCCTTGAAAGGGGTGGAGAGCGACGAGGAGATACGGCGGGTGCCGGAGATGGGAGGGGGCGGCGGGTCGGCGTCGTCGGGGGCGGGGGCGGACGAGCGGCAGGGGAAGGAGGACGGGAAGCAGCAGGGTGGTGGCGGCGGCGGGGCGGCGGCGGCGGGGGGCGGGCAGGAGCAGGCGCCGCCGGCGAGGAAGCGAGGGCGGAGCGCCGGCGACAAGGAGCAGAACCGGCTGAAGCGGCTGCTGCGGAACCGCGTGTCGGCGCAGCAGGCGCGGGAGCGGAAGAAGGCGTACATGACGGAGCTCGAGGCCAAGGCCAAGGACCTCGAGCTCCGCAATGCCGAGCTCGAGCAGCGCGTCTCCACCCTCCAGAACGAGAACAACACGCTCCGCCAGATACTCAAGAACACGACGGCGCACGCCGGCAAGAGGGGCGGCGGCGGCGGAGGCAAGGGCGGCGATGGCGGCGGCGGCGGGAAGAAGCACCATTTCACCAAGAGCTAG</cdnaseq>

Protein Sequence

<aaseq>MAALLLRRLAGTHRGRVPLAAAAAVTGGAALFCASSPPTIALMEEKGEDAAAKVALNPDKWLEFKLQEKATVSHNSQLFRYTPISDPDSKGYFDLLIKVYPDGKMSQYFASLKPGDVVEVKGPIEKLRYSPNMKKQIGMIAGGTGITPMLQVVRAILKNPDDNTQVSLIYANVSPDDILLKRELDRLASSYPNFKVFYTVDKPSNDWRGGVGYISKDMALKGVESDEEIRRVPEMGGGGGSASSGAGADERQGKEDGKQQGGGGGGAAAAGGGQEQAPPARKRGRSAGDKEQNRLKRLLRNRVSAQQARERKKAYMTELEAKAKDLELRNAELEQRVSTLQNENNTLRQILKNTTAHAGKRGGGGGGKGGDGGGGGKKHHFTKS</aaseq>

Gene Sequence

<dnaseqindica>1..120#200..242#908..983#1649..1703#1828..1898#1983..2034#2176..2253#2500..2589#2679..2757#3021..3403#3475..3582#ATGGCGGCGCTGCTGCTTCGTAGGCTCGCCGGGACCCACCGCGGCCGCGTGCCTCTGGCCGCCGCCGCCGCCGTCACCGGTGGAGCGGCGCTCTTCTGCGCCTCGTCTCCCCCAACCATCGTACGAACGAACCTCCTCACCGGCTCCATTTCTCCTGCAGCTTTGCTTTCTCTGTCTCACTGGTGCCGAATGATTGCAGGCGCTCATGGAGGAGAAGGGCGAGGATGCCGCTGCTAAAGTTGGTGAGACTCGATTTCTTGGATGTGTGGATTAATAGAAACAGTTCTTATGTCCTCATGGACTATTTTTTTTTATCTTGTCTGTTATGTTACGGTATTTCCTGCATCCTACCAGAGGCTGGGGATGGCTAATGATGCGAACACCTGAATGAACAGTAGTCCAAATTGTTCGTAGCATAGGAATTTAAGGCGACTTTCTAGGAACAGAATAGTCAGCCAAGTTCAAATGGAAATTTTCATATATGTTCCATTTGTTATGGACAAGGCCAAGTGTAAATGTGTTCCTTCAGGCATACTACTGTCAAATACTTAATGCACATCAATATGTTATCTGATTATGGATTTTGGCATGGTCGGATAAAAATGGTACCGTGTAGGGTCATGTAGGCATTCTAGTGGTGGTTCTGTATGGTTTTCATGCCATAATTTGGATCCTCTACATTGCTGTCTCCTAGATATTGTTTTTTAAGTGGTTCTGTTGCCTATAATCTCATCTGATCACCAATGTGTTGATGTACAAAGTTAGAGAATCCTCTTCAGATCCTGGCTGCAGCTTGCAAAATTTGTGATAATCTAAATTATTTTCCTAGCAATTTAGTCTTTATACTTCTTTACTGTTTTATTTCTGCATTTTCTTCCAACTGACAATTCTTTTTCTTGCTTTTCAGCGCTTAACCCAGACAAGTGGCTAGAGTTCAAGCTCCAGGAGAAGGCAACAGTTAGCCACAATTCACAATTATTTAGGTAATATTGGTAAAATTATACCATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTAAAGAATGTGTATAGATGCAGATGCTGTGTTAATAACCTTAGTTGAAACAGTGTTCTAGCTAATTATTATTGTTGTCGCTACTAGCCTGTAACAAATATTGTGCAAAGCAAAATACCACTTTATGTTAAATGAATAAATAGTTCATGTTTTTCCCCCATGTTAAATGTTACTGTTTAGCAGTTAGCCGTTTCAGAAAAGAGAGGGTTTTATATACCATTCTGTACATTTCAGCAGCACCTTGTTTAATATTTTGGCCTTCTATCTACTCACTCTTTTATAGGCGTGAATCATTTTGCATCTACTTTTCTGATAGTATGAGCTAGTATTTTTTATATTTATTTCTTACCTTGGAGACTCTAAAACCATTAATTCATCTCAGGGCTCCAATAGGAGAGGAAGTGGAGGGAGGAAGAAAATTTGTCATTCGCCCGTAAGCAGAGACAAAAACAGTTATCCATTATTGCATACATAACATATGTTAGTACGACTGTTCGATTAGATTTTTATTGGAATCTAACATGTTTTCTGCAGGTACACACCTATCTCTGATCCAGATTCTAAAGGATATTTTGACCTGCTAATCAAGGTAACACAAAGTTTAATGTCTGAAGTTCAGAACATGCTAGTTGCTTTTAGATCAGCAGTTCTTGTAGTCCAGTGTAAGGTAGTACTGAAAGGAGAGTTATTTTTGTGCTATATGTATGTTGCAGGTTTACCCTGATGGGAAAATGAGTCAGTATTTCGCAAGTCTGAAACCAGGAGATGTTGTTGAGGTCAAAGGGTAATGTGAAATGAAAATCCGTTGAGTTTTCTATGCATGTTATTGGCTATCTGTAATTGATGTCTTTCTCTTTTTTTTTTCCAGGCCCATTGAAAAGCTCAGATATAGCCCAAATATGAAGAAACAAATTGGCATGGTAAGACATGACTTCAACCTTAGCCAAGTGTCTATGTTTGCCAATTCAATTTAGCAAGCCCAAAGCTAGAAAAATTCTGAAGTTATCAAGCTGGTCTTTTTTTTTAAAAAATTTTAACAAAATGTATGTATATGCTTTCAGATCGCTGGTGGGACTGGCATAACACCAATGCTGCAGGTTGTCAGGGCTATCCTAAAAAACCCTGATGACAACACTCAGGTCTGTTGCCATCACAATTTTTTTGAACTTATTTGCACCGACTTGCACCCTTGTGACATCCCTTTGAGAAACTATCATTTTATGTGAACGATATTGCTATACCACGTAACTTTGTTATGCATGCTGACATGACAGAACAGATCAATGTATCCACTTTCATACTGCTACCAGAAATAACATTATTAGCTATATAATGTTTGACTAATGTTTTGTTCTAATCTGATTTATGGTTCTTGGTATTTCTAGGTTTCCTTAATTTATGCCAATGTGTCACCAGATGATATCTTGCTGAAAAGGGAATTAGATAGACTTGCCAGTAGCTATCCTAATTTCAAGGTTGGTATTACTACAGGGTTTAATTCATTTTGATCTGATTACATGGGATTTTTTTGTTAGTGTAACACGCCCTTGTAATTTTTCTCTAGGTATTCTACACGGTGGACAAACCATCAAATGACTGGAGGGGTGGTGTTGGCTACATATCCAAGGACATGGCCTTGAAAGGTTTGCCACGGCCAGGGGAGGATTCTCTGATCCTTGTGAGTAGTCTTTGTCATTTCTGCTTATAGTTCTGCTGATATTCTTTAAGCTTTTGACAAGAGTTTGTACAATTTTAAAGCTCGCTTATAATCTCCATCAACATTATCTTCATTCATGTGTAGCATAAACATGATTATTAATGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCTGAATTGAGCGAGCGATTCGGTGGCGGCAGGGGTGGAGAGCGACGAGGAGATACGGCGGGTGCCGGAGATGGGAGGGGGCGGCGGGTCGGCGTCGTCGGGGGCGGGGGCGGACGAGCGGCAGGGGAAGGAGGACGGGAAGCAGCAGGGTGGTGGCGGCGGCGGGGCGGCGGCGGCGGGGGGCGGGCAGGAGCAGGCGCCGCCGGCGAGGAAGCGAGGGCGGAGCGCCGGCGACAAGGAGCAGAACCGGCTGAAGCGGCTGCTGCGGAACCGCGTGTCGGCGCAGCAGGCGCGGGAGCGGAAGAAGGCGTACATGACGGAGCTCGAGGCCAAGGCCAAGGACCTCGAGCTCCGCAATGCCGAGCTCGAGCAGCGCGTCTCCACCCTCCAGAACGAGAACAACACGCTCCGCCAGGTAAAGCCCCCTCGAGCTTTGCTTCACCATTCTCAATCTCTCATGGCGATTTCTCCTCTACTCTCCTATAGATACTCAAGAACACGACGGCGCACGCCGGCAAGAGGGGCGGCGGCGGCGGAGGCAAGGGCGGCGATGGCGGCGGCGGCGGGAAGAAGCACCATTTCACCAAGAGCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002288

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA002288&oldid=40012"