BGIOSGA002301

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Revision as of 10:34, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA002301| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA002301, complete gene.| tag = OsI_005...")
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Gene Name

BGIOSGA002301

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002301, complete gene.

LocusTag

OsI_00574

Ensembl Transcript ID

BGIOSGA002301-TA

Ensembl Protein ID

BGIOSGA002301-PA

Length

3429

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:4097566..4100994

Sequence Coding Region

4100818..4100994,4100582..4100668),complement(4100224..4100460,4099406..4099570),complement(4099030..4099083
,4098315..4098461),complement(4097566..4097943

Genome Context

<gbrowseImage1> name=IndicaChromosome01:4097566..4100994 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:4097566..4100994 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTTCTTCGGGATGCAGCAGCAATCGGTTGCGACAAACCATTGTCGTTGCGTTGCTGCTGCTGGCTTCTTCTTCTTGCTTGGCATCCGCGAAGCACAGGGGCAATGGCACGACGACGACGGTGCCGTTCCATGGCAAGGATGAGCTGCGCAGGTACAGGAAGATCATGGCGCAGAGCCCCGACGGCGATGTCATCGACTGCGTGCCGGCGCGCCTGCAGCCGGCGTTCGACCACCCGAAGCTGCGAGGACAGAAGCCCGAGGCTGAGCCGGAGGAGAGGCCCAAGGTCGGCGGCGCCGCGGCGGCGGAGGCGGAGGAGGAGGCCGTGTTCCCGCAGGCGTGGACGGACGGCGGCGAGTCGTGCCCGGAGAAGACGGTCCCGGTGCGGCGGACGAGGAGGCGCGACGTGCTCAGGTCTAGCTCCGCCGTCCGGTTCGGGATGAAGCAGCCACGCGCCGCCGGCGTCGTCCGCCGCGACTCCACCAGCGACGGCCACGAGCATGCGGTGGGGTACGTGACGGGGGATCAGTTCTACGGGGCGAAGGCGAGCCTGAACGTGTGGTCGGCGAGGGTGGCGACGGCGGCGGAGTTCAGCCTCTCTCAGATCTGGGTCATCTCCGGCTCCTTCGGCAATGACCTCAACACCATCGAAGCCGGATGGCAGGTGAGCCCTGAACTGTATGGAGATAACAACCCAAGGTTCTTCACATACTGGACAACTGACGCGTACCAGGCGACCGGGTGCTACAACCTCCACTGCTCCGGCTTCGTGCAGACCAACAACCGCATCGCCATTGGCGCCGCCATCTCCCCCACCTCCGTTTACAATGGCCGCCAGTTCGACATCAGCCTTCTCATCTGGAAGGACCCACGTCGGGGGCACTGGTGGCTGCAGCTGGGGTCGGGCCCACTGGTGGGGTACTGGCCGTCGTCCCTCTTCACCCACCTGGGCGGCCACGCCAACATGGTGCAGTTCGGCGGCGAGGTGGTGAACACGCGGCCGTCGGGGTCGCACACCCCGACGCAGATGGGGAGCGGCCACTTCCCCCGCGAGGGATTCAACCGCGCCGCCTACTTCCGCAACCTCCAGGTAGTCGACTGGGACAACAACCTCCTCCCCGCCGCCGCCCTCCGCCTCGTCGCCGACCACCCCTCCTGCTACGACATCCAGGGCGGCTACAACCGCGCCTGGGGCAACTACTTCTACTACGGCGGCCCCGGGCGCAACGTCCGTTGCCCCTAG</cdnaseq>

Protein Sequence

<aaseq>MASSGCSSNRLRQTIVVALLLLASSSCLASAKHRGNGTTTTVPFHGKDELRRYRKIMAQSPDGDVIDCVPARLQPAFDHPKLRGQKPEAEPEERPKVGGAAAAEAEEEAVFPQAWTDGGESCPEKTVPVRRTRRRDVLRSSSAVRFGMKQPRAAGVVRRDSTSDGHEHAVGYVTGDQFYGAKASLNVWSARVATAAEFSLSQIWVISGSFGNDLNTIEAGWQVSPELYGDNNPRFFTYWTTDAYQATGCYNLHCSGFVQTNNRIAIGAAISPTSVYNGRQFDISLLIWKDPRRGHWWLQLGSGPLVGYWPSSLFTHLGGHANMVQFGGEVVNTRPSGSHTPTQMGSGHFPREGFNRAAYFRNLQVVDWDNNLLPAAALRLVADHPSCYDIQGGYNRAWGNYFYYGGPGRNVRCP</aaseq>

Gene Sequence

<dnaseqindica>1..177#327..413#535..771#1425..1589#1912..1965#2534..2680#3052..3429#ATGGCTTCTTCGGGATGCAGCAGCAATCGGTTGCGACAAACCATTGTCGTTGCGTTGCTGCTGCTGGCTTCTTCTTCTTGCTTGGCATCCGCGAAGCACAGGGGCAATGGCACGACGACGACGGTGCCGTTCCATGGCAAGGATGAGCTGCGCAGGTACAGGAAGATCATGGCGCAGGTTGCCAGGTTGAAGAAGGCTTCTGTCAAGACGATCCAGGCAATTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTGCTTCTCTCACTAGCTAGCTTGCTAGGAGTAGCTGAGCTGATGGTGCTGTGGTGTTTGTGTGCATGCAGAGCCCCGACGGCGATGTCATCGACTGCGTGCCGGCGCGCCTGCAGCCGGCGTTCGACCACCCGAAGCTGCGAGGACAGAAGCCCGAGGTGACCGATCAATCCGTTGTTCTTGATTTTTCCTTTTGGTTTTGATTTTGCAGTGATCGTTTCTGTCTCTGTCTCCGTCGGCGCCTGGTTCTTGATCGTGTTTGTGCGCGTGTGTGTGCAGGCTGAGCCGGAGGAGAGGCCCAAGGTCGGCGGCGCCGCGGCGGCGGAGGCGGAGGAGGAGGCCGTGTTCCCGCAGGCGTGGACGGACGGCGGCGAGTCGTGCCCGGAGAAGACGGTCCCGGTGCGGCGGACGAGGAGGCGCGACGTGCTCAGGTCTAGCTCCGCCGTCCGGTTCGGGATGAAGCAGCCACGCGCCGCCGGCGTCGTCCGCCGCGACTCCACCAGCGACGGCCACGAGGTCAGTCAGTCAACCAACTCGCCGGTCACCGGCGAGCTCGCCGTCGGCAAGCTCGCCCTCCATGTATATCATTCTGCATCATCAATTCATCATTATTGGTATTGCAAAACGCGTCAGGAAAAGAAAACTCATATAAACCACACGAGTAGGAAAAAACTGAAGAAAATTCAGAGAGGAAGCAGATCGATGCATGCACACACGGCTAGTTAATGCTGCTGTACTGTGCTACTATCATTAATACCAGATCACTAATCCGAAAGATTAGTTAGGGAAACAGTGCAATTAGTGCCATTGCTGGTACAGTTCAAAACTTGGAGTTCAAAGTTCAAACCACTGCTCCTACTACAACAAAGAAACCGGCTTCCTCTCAAGTTTAGCAGTTACTACCAGTGGTGGTTACTACTATAATTAGTACTGCTAGTACTAGTAATGCACCATTATGTAGAGTAATTGCATGGTTTAATTTGCTAGTACTTGTTTGAATAAGTTACTGCATGATGAAATGATCGAGTAGTACAGTATACGTTGTGCTGCACAGCTGCTGGTGCGGCAACAATGGCGACAATGGCGATGGCGAGTTGGCAACGAACTTTAATTAAGAGTGTAATTAATTAGCTGAGATTGTTGATGAGCTGATGAAAATGATGATGCAGCATGCGGTGGGGTACGTGACGGGGGATCAGTTCTACGGGGCGAAGGCGAGCCTGAACGTGTGGTCGGCGAGGGTGGCGACGGCGGCGGAGTTCAGCCTCTCTCAGATCTGGGTCATCTCCGGCTCCTTCGGCAATGACCTCAACACCATCGAAGCCGGATGGCAGGTAATCTAGTCTAATCTAATCTAATCTCTCATGCATTAATCTGCCCTATATCAATATAATCATATGTACACTCATGCATGTTGCATGCATGCAAGAACTCTGAACATTTCTTGCTAACTCTGAAGAATACTGATAGAATGTTAACTCTGAAGAATACTGGTACATGTTAACTCTGGCTGTGTTTAGTTTCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGAGCAGTCAAAGCTGATCGATCTGCTGGCTGGAGTGGAGAGACACTGCTTAACTTTCTGAACTCTTGTTCTTTATTCAGGTGAGCCCTGAACTGTATGGAGATAACAACCCAAGGTTCTTCACATACTGGACAGTAAGTCCTCTCTTCTGCACCAATCCCACTGCTCCCTCCATTTTAATTTACTTGCTGTTCTAGATTTGTCATAAGATAAGCATGTCTATCTTTAACCATTAATTTTTAGAAATCCATTAATAATGTATGAATTATATATTATAAAAGTATTTCTCATGGTAAATCTAAAAAAATAAATCTTAAGATGTGAGTTTACAGAAATCATCAAAGATTAGAATTTTTGACCTAGGATAAACATAGAACAACGAATAATTCATCAGCTGGAAAAAAATACATGTTCAGTTTACACTCAGTTTTTCTTACCGGTATCTGGATTTTGACATTTTGCCATTGAAAACCTGCAAGAAACAACAGTACTTAATACTACAACAGGTAGCAGCAAGTGTAGTGGATAGAACTAATAGCAATGTCAGTGCTCACATTGAATGCAATAAGTTCCCAAGTACTGAATCCTACTAGTTCTTGAAGTGAGTAAAAAGTATAAAGAAACGGGAAGAGAAGAAAGATGCATGTGTTGCAATGCAATATTGGCACGATGAGATGTCTAAACTGTTGCGATGGCATGCAGACTGACGCGTACCAGGCGACCGGGTGCTACAACCTCCACTGCTCCGGCTTCGTGCAGACCAACAACCGCATCGCCATTGGCGCCGCCATCTCCCCCACCTCCGTTTACAATGGCCGCCAGTTCGACATCAGCCTTCTCATCTGGAAGGTAATACTCATATACGTACTAGCTTGAACTGCAAAGTGAACTGAATGAACTATTTCATATGAAATTCATGATCTGACCAGTTTGAGTTTAAATAATTTATGAGTAAAACTTTCATATTCGTATAATCGTGATAAAAAAAAACCCAAGGCTGGAAAAAATATAGTACGATCGACGTATAAACCTTAGAATGAACTCTGAAATTAAGTTTTCAAAATTCAAAGTTTAGCTACGACTGATAAGCCAACAAGCAGACAACAAATTTTAGGAGAGATGACTGAACTGAAATTCAGAAAATTAACAAAAAAAAATCTGAAACTTTGGATGAAAAGATTTATACTAATTAAATTTCAACGAATTTGGCCGGTGTGTAGGACCCACGTCGGGGGCACTGGTGGCTGCAGCTGGGGTCGGGCCCACTGGTGGGGTACTGGCCGTCGTCCCTCTTCACCCACCTGGGCGGCCACGCCAACATGGTGCAGTTCGGCGGCGAGGTGGTGAACACGCGGCCGTCGGGGTCGCACACCCCGACGCAGATGGGGAGCGGCCACTTCCCCCGCGAGGGATTCAACCGCGCCGCCTACTTCCGCAACCTCCAGGTAGTCGACTGGGACAACAACCTCCTCCCCGCCGCCGCCCTCCGCCTCGTCGCCGACCACCCCTCCTGCTACGACATCCAGGGCGGCTACAACCGCGCCTGGGGCAACTACTTCTACTACGGCGGCCCCGGGCGCAACGTCCGTTGCCCCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002301

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA002301&oldid=40025"