BGIOSGA002313

From RiceWiki
Revision as of 10:34, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA002313| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA002313, complete gene.| tag = OS01G01...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA002313

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002313, complete gene.

LocusTag

OS01G0167800

Ensembl Transcript ID

BGIOSGA002313-TA

Ensembl Protein ID

BGIOSGA002313-PA

Length

3193

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:3900020..3903212

Sequence Coding Region

3902568..3903212,3901425..3902479),complement(3901003..3901300,3900271..3900640),complement(3900020..3900096

Genome Context

<gbrowseImage1> name=IndicaChromosome01:3900020..3903212 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:3900020..3903212 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACAGATTTGTGCGAGTTTACAGTGGCGGGGAGCTGGTGAAGGGTCCAAACGGGGTGGAGTTTGGCAACCTCGCCGAGGAGGGTTTATGGTTCAAGGCGAAGCCTGCATTCGATGAACTGATTGATGCCGTGTACAAGAAGCTCGGGTGGGTGCCTACGATGCTCAGCATTCGTGCGCAGGGAAGGTTGAACGTTGGTGGTGGTGCTCATCGGCACTTCATCATGGTGCCTATCGATGATGACATGTCGTGGAGTAGCTATGTGAAAGCTGTTTTCAATGGGACTGAGTGGAACTGCCTAGAGATTTTTGTTCAAGCAGAAATTTGTTCCTTGACAGAGGGCATATCCTCAGAGAGAGCACTAATGGCTATCAAACCGCTTTATGCACAACGTCAAAATGGCCAACCGCAGAATCCAGAACAGGACATGTCGTTTGTTATCCCTTCAACGGTGAATGTTAGTCCACTAAATGGACATCCTCAGAACACACGGCAACGAAAACCAAGAAAGAGCACCAGGACCTTCTCTGATGATGGTTGTCCAGATCAGAATGGAGCTTCAGAAGCAGTTGATACCACTTCCTATGATTTAATTGGGCAGTATGATGCTGATCATCGGGCTCGTGCTTTAGCATCAGGCCAGCATTTGACTGAGCTCAACCCTCGTACCCGTGAACCTCTTCGCTTTGACAGGAGGTATGAGCGTTACCTTAGGCCCGCTGGCCTGATGGGACTGGCAAACATTTGTAGGGCTGGTCTGCCCTCCATTGATCGGGCACTCGTCTCTGCACTAGTTGATAGGTGGAGACCTGAAACTCACACTTTTCACATGCCTTGTGGTGAGATCACAATCACACTACAGGATGTTGCAATGATTCTTGGATTGCCAATCGCTGGCCATGCTGTCACTGTAAACCCAACAGAGCCCCAGAATGAATTGGTTGAGCGATACCTTGGGAAGGCTCCTCCGCCGGATAGGCCACGTCCTGGATTGAGGGTTTCATGGGTCAGAGCTGAGTTCAACAATTGTCCAGAAGATGCTGACGAGGAGACCATCAAGCAGCATGCCAGGGCATACATCCTTAGCCTGATTAGTGGTCTGCTGTTTCCTGATGCCTCTGGTGATTTGTATACCTTCTATCCCTTTCCACTGATTGCTGATCTTGAGAATATTGGTTCATACAGTTGGGGTTCCGCTACTCTGGCATATCTCTACAGGGCAATGTGTGATGCTTGCAGGAGGCAGTCAGATGGAAGTAATCTGACTGGTTGTCTTTTGCTCCTTCAATTTTGGTCATGGGAGCATTTTCCAATTGGCAGGCCAGACCTGGTGAAGCTAAAATACCCAAATGTGGAGGAGCTAGAGGATGAGAGGGATAGACCCACAGTTGGTTTACGATGGGTTGTGGGGGTGTGCGCCCGTCGAGCAGCTCCCGCACGTTGCTATGAGCACTTCACGAATGAGTTTGACTTGCTAACGGATGACCAGGTTGTTTGGTGCCCATATAGGGAGGAACGGATGAAGGAACTACAGCTAGCCCCTATTTGTACCCAGGATTCTCATTTGTGGCTAACCCGAGCACCTCTACTTTACTTCTTTATGGTGGAGATCTACATGCCTGAGAGAGTGATGCGCCAATTTGGCCTCCATCAGGTGTGCCCACCTCCATTGCGGGACACTAGTGCGGAGCTTCACTGGTGCCGTCGTGGAAGGGTTCATAATGACTGGGCACAGAAGCACAAGTCTTTTGTGGATATGTGGGAAGCAAAGGAGCAAGATGTTGTCATGGAAGACCGGCCATATGACCACAGCAGTTATATGGATTATTTGCGGTGGTACAGAAGATCAACACGTATTCGCCTGTGCACACCGAAGAGGATAAGTAATGGTCACAAGGGTGGGGCATCTGGTGGGAGTGCAATTTCTGATTCTGAAGATCCTTTTCGTGCTTCTCAGCTTCGTTACACCCCCAGGGCTCATTTGATCCACTCAGTGACCGACAAACTCACTGTCCTTGCGAAGGAGGCAGCTTCTCAAAAAGGTTGCTCTAGAGGCAAATGCCGTGCTTTTGTTGACCAAGTCACCAGAACATGTGTAGAAGTTATTGGGGAACTTGGTGGATCATCACTTTGCGACATTGTGGATCTGGTTCCATGCTCATCGACTGCTGCAACAACTGCAGCTGAACCAGAGGCAGAGCAACAGAGGGATAAAGAGGAAGATATACATCATTCCATGGCGCCTGATCAGGAAACTGAGTCTGGCCTCGGTTCTGAGAAGCGATCTCGATCACGGACTCGCCGCACACAGGCAGACAGGACAGTTCAAACAAGATCAACCGGAAAGAGGAAGAGGGGCAGATCAGCCCCGCGGTTTATGTACCATAAGAAGCTGTGGGATGAAGGAACGGCATGGTGCTCAAACCAGCTTATCATTTCATGA</cdnaseq>

Protein Sequence

<aaseq>MDRFVRVYSGGELVKGPNGVEFGNLAEEGLWFKAKPAFDELIDAVYKKLGWVPTMLSIRAQGRLNVGGGAHRHFIMVPIDDDMSWSSYVKAVFNGTEWNCLEIFVQAEICSLTEGISSERALMAIKPLYAQRQNGQPQNPEQDMSFVIPSTVNVSPLNGHPQNTRQRKPRKSTRTFSDDGCPDQNGASEAVDTTSYDLIGQYDADHRARALASGQHLTELNPRTREPLRFDRRYERYLRPAGLMGLANICRAGLPSIDRALVSALVDRWRPETHTFHMPCGEITITLQDVAMILGLPIAGHAVTVNPTEPQNELVERYLGKAPPPDRPRPGLRVSWVRAEFNNCPEDADEETIKQHARAYILSLISGLLFPDASGDLYTFYPFPLIADLENIGSYSWGSATLAYLYRAMCDACRRQSDGSNLTGCLLLLQFWSWEHFPIGRPDLVKLKYPNVEELEDERDRPTVGLRWVVGVCARRAAPARCYEHFTNEFDLLTDDQVVWCPYREERMKELQLAPICTQDSHLWLTRAPLLYFFMVEIYMPERVMRQFGLHQVCPPPLRDTSAELHWCRRGRVHNDWAQKHKSFVDMWEAKEQDVVMEDRPYDHSSYMDYLRWYRRSTRIRLCTPKRISNGHKGGASGGSAISDSEDPFRASQLRYTPRAHLIHSVTDKLTVLAKEAASQKGCSRGKCRAFVDQVTRTCVEVIGELGGSSLCDIVDLVPCSSTAATTAAEPEAEQQRDKEEDIHHSMAPDQETESGLGSEKRSRSRTRRTQADRTVQTRSTGKRKRGRSAPRFMYHKKLWDEGTAWCSNQLIIS</aaseq>

Gene Sequence

<dnaseqindica>1..645#734..1788#1913..2210#2573..2942#3117..3193#ATGGACAGATTTGTGCGAGTTTACAGTGGCGGGGAGCTGGTGAAGGGTCCAAACGGGGTGGAGTTTGGCAACCTCGCCGAGGAGGGTTTATGGTTCAAGGCGAAGCCTGCATTCGATGAACTGATTGATGCCGTGTACAAGAAGCTCGGGTGGGTGCCTACGATGCTCAGCATTCGTGCGCAGGGAAGGTTGAACGTTGGTGGTGGTGCTCATCGGCACTTCATCATGGTGCCTATCGATGATGACATGTCGTGGAGTAGCTATGTGAAAGCTGTTTTCAATGGGACTGAGTGGAACTGCCTAGAGATTTTTGTTCAAGCAGAAATTTGTTCCTTGACAGAGGGCATATCCTCAGAGAGAGCACTAATGGCTATCAAACCGCTTTATGCACAACGTCAAAATGGCCAACCGCAGAATCCAGAACAGGACATGTCGTTTGTTATCCCTTCAACGGTGAATGTTAGTCCACTAAATGGACATCCTCAGAACACACGGCAACGAAAACCAAGAAAGAGCACCAGGACCTTCTCTGATGATGGTTGTCCAGATCAGAATGGAGCTTCAGAAGCAGTTGATACCACTTCCTATGATTTAATTGGGCAGTATGATGCTGATCATCGGGCTCGTGCTTTAGCATCAGGCCAGGTAGATCAAAGAGTACCTATAGCATTTATATTACAATCTTTTGTCGTGTAACAAACCGTTGATTTGCAATTTCCAATGTTTGGTACAGCATTTGACTGAGCTCAACCCTCGTACCCGTGAACCTCTTCGCTTTGACAGGAGGTATGAGCGTTACCTTAGGCCCGCTGGCCTGATGGGACTGGCAAACATTTGTAGGGCTGGTCTGCCCTCCATTGATCGGGCACTCGTCTCTGCACTAGTTGATAGGTGGAGACCTGAAACTCACACTTTTCACATGCCTTGTGGTGAGATCACAATCACACTACAGGATGTTGCAATGATTCTTGGATTGCCAATCGCTGGCCATGCTGTCACTGTAAACCCAACAGAGCCCCAGAATGAATTGGTTGAGCGATACCTTGGGAAGGCTCCTCCGCCGGATAGGCCACGTCCTGGATTGAGGGTTTCATGGGTCAGAGCTGAGTTCAACAATTGTCCAGAAGATGCTGACGAGGAGACCATCAAGCAGCATGCCAGGGCATACATCCTTAGCCTGATTAGTGGTCTGCTGTTTCCTGATGCCTCTGGTGATTTGTATACCTTCTATCCCTTTCCACTGATTGCTGATCTTGAGAATATTGGTTCATACAGTTGGGGTTCCGCTACTCTGGCATATCTCTACAGGGCAATGTGTGATGCTTGCAGGAGGCAGTCAGATGGAAGTAATCTGACTGGTTGTCTTTTGCTCCTTCAATTTTGGTCATGGGAGCATTTTCCAATTGGCAGGCCAGACCTGGTGAAGCTAAAATACCCAAATGTGGAGGAGCTAGAGGATGAGAGGGATAGACCCACAGTTGGTTTACGATGGGTTGTGGGGGTGTGCGCCCGTCGAGCAGCTCCCGCACGTTGCTATGAGCACTTCACGAATGAGTTTGACTTGCTAACGGATGACCAGGTTGTTTGGTGCCCATATAGGGAGGAACGGATGAAGGAACTACAGCTAGCCCCTATTTGTACCCAGGATTCTCATTTGTGGCTAACCCGAGCACCTCTACTTTACTTCTTTATGGTGGAGATCTACATGCCTGAGAGAGTGATGCGCCAATTTGGCCTCCATCAGGTGTGCCCACCTCCATTGCGGGACACTAGTGCGGAGCTTCACTGGTATCTTCAAAACAGAACTTTGCTGTTTTTATTCTTATTATTTCTTGTACATGACTGTGTGTCCTGGTAAATTATAGAATCATCTACAGGTAGCCGAATCATAAAATTTTCTAATGTTTTGCAGGTGCCGTCGTGGAAGGGTTCATAATGACTGGGCACAGAAGCACAAGTCTTTTGTGGATATGTGGGAAGCAAAGGAGCAAGATGTTGTCATGGAAGACCGGCCATATGACCACAGCAGTTATATGGATTATTTGCGGTGGTACAGAAGATCAACACGTATTCGCCTGTGCACACCGAAGAGGATAAGTAATGGTCACAAGGGTGGGGCATCTGGTGGGAGTGCAATTTCTGATTCTGAAGATCCTTTTCGTGCTTCTCAGCTTCGTTACACCCCCAGGGCTCATTTGATCCACTCAGTGGTAAGACATCCTACTTGTAAAATAAATCATGCTACTACCATGCAGGTGTGATCGTGTGAGCTTCATTCAGGTTACCTTCTTTTGATATTTACTAGCCAAATACCCATGCGTTGCATTGATCTAGAACAAGTATATCATAAATTCTGAACTTCAAAAGCTGCATATAATTTTCAATTGAACATGAATCACTAAATAATTCTATTGCAAACCGCATGCACGGATTACATAATTATTTTGTGAAGATTTTTCAACTAACAAGAACACGTATGCATGTATCTATGGTGATGATGGTTGGATGATAGACTCGCCACCACCAGCAGGATACTTTGATATATCTCTGAAATTCCCATCGTTTGCCCCAGACCGACAAACTCACTGTCCTTGCGAAGGAGGCAGCTTCTCAAAAAGGTTGCTCTAGAGGCAAATGCCGTGCTTTTGTTGACCAAGTCACCAGAACATGTGTAGAAGTTATTGGGGAACTTGGTGGATCATCACTTTGCGACATTGTGGATCTGGTTCCATGCTCATCGACTGCTGCAACAACTGCAGCTGAACCAGAGGCAGAGCAACAGAGGGATAAAGAGGAAGATATACATCATTCCATGGCGCCTGATCAGGAAACTGAGTCTGGCCTCGGTTCTGAGAAGCGATCTCGATCACGGACTCGCCGCACACAGGCAGACAGGACAGTTCAAACAAGATCAACCGGAAAGAGGAAGAGGGGCAGATCAGGTTCGAGATGAGAATTGCACGGTGAGTTATTTAGCTTGGTTTTTCTGCTCTTTCTGGATAATCACTCTACATTTCCTTTAGTTTTATCGTGTCCATGCTGCTTGTTTCTTTCATGGTTAAGCCATTTTAAATTTCTCATGGACTGTTATCTGCTTGTTCTGCTTGAAATTACAGCCCCGCGGTTTATGTACCATAAGAAGCTGTGGGATGAAGGAACGGCATGGTGCTCAAACCAGCTTATCATTTCATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002313