BGIOSGA002325

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Revision as of 10:34, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA002325| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA002325, complete gene.| tag = P0701D0...")
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Gene Name

BGIOSGA002325

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002325, complete gene.

LocusTag

P0701D05.9-1

Ensembl Transcript ID

BGIOSGA002325-TA

Ensembl Protein ID

BGIOSGA002325-PA

Length

3838

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:3787450..3791287

Sequence Coding Region

3791161..3791287,3790795..3790997),complement(3790001..3790717,3789827..3789883),complement(3789243..3789585
,3788966..3789165),complement(3788229..3788296,3788028..3788129),complement(3787650..3787836
,3787450..3787539

Genome Context

<gbrowseImage1> name=IndicaChromosome01:3787450..3791287 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:3787450..3791287 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGTGCTGGAAAGAAGACTCAGACCGAGAACGAGTTCCGTGAGCTCCCGGAAAAGGAGCTAGGAGGGGTGGTCTTTTGTTGCAATAACAACACATTCGATGAATGCTTCACTAAACAGTTATTTGGTTTGCCTCAACGCAATATCTTGTATGTGAAGAATGTTAAACCTGGCTTGCCTCTCTTTCTGTTCAATTATAGTAACAGACAATTGCATGGCATTTTCAAGGCTACAAGCACTGGCCAGCTTAATATCGACCGATTTGCTTGGATGTCTGAACAGTCTAATGATGCAAAGACAAATGCAAAGACAACACCATTTCCTGCACAGGTCCGCTTCTCTACCAGGACAGAGTGCCCTCCACTTCCAGAAAGCAAATACAAAAGTGTAATCATAAACAATTATCGCAAGGATAAACCTAGCCACTTCCGTTTTGAGCTAGACCATCGACAAACAAGAGATTTGATTTCTTTGTTTCTACCTGCTCCTGTTCGCGCTAATCAAAACAAACTTAGTATTCCAAAACCTCCTGCTACCGCTCATACTGTTCCAAATCCATGGAATCGACCTCTGCCATTTCTTACAGCAAAAGCACCTGTTGTTTCTGATAAAGTGAAGAGTGAATCCAATGTGAAGGATGTGGATCAGTTCAATGTTTCATCACACTCACATGATATTGTTCCTCATACCTTGCCTGATGTAGAAGTCGACCTTGCTAGCACAAGTACAACATCAAGGAGCAACCTTAACAAAGATGCTTCTGGCTGTGATGACCTGGTTGCTGGTTTGATCAAGGAAGATAAAGAATCTGTGGATGATGACCAGCATGCTAAAATGGATTTACCAGTAAAGCTGCAAGAGCTGTCTTCTTTACAACAGAAGGAAGCCAATTTCTTGGAGGATGCTCCTGTTTCTACTTCAGCTCAAAGCATACGTCAAGATACACGGTTTGCTGCTACTCTCCCCAAAGATTCATTTAATGCCACATCTCAATGTGACACATCATTGAAAGATACATCCTTTGTGCAATGCCATGAATATGCTGAGCTGTATCAAATTATCAATGATTTATCCAAGAAGACCGAAGAAATGGAAAAGATGAAGGTTGATTCAGATCAAGAAATTTTGTTGTTGAAGAAATTGGTAAAGGTTATGGAAAGAAAAGTTGAACATCTGGAACAGCAGCTTGAGAAATCGCATAGCTCTTCAGCACCACTCTTCGGTGTAACAAATGATGATGTAGAAGGGCCATCAATACTCCTAACAGGTGGCCATAATGGCATTAACTGGCTGTCATCCCTTGATTCATATTGCCCTGCAACGGACATACTAGAAACTCTAATGCCGATGAGCTCAGCCCGTGCATATGCGGCTGTTGCCACATTAAAGGACCATGTCTTCATTTTTGGTGGTTGGAATGGCATTCGCAGTTTGTGGTACAACACAGTGGAGTGCTACAACAGGGGAGCCAATAAGTGGATAGGATTGCCCTGCTTGAATCATGAGAAAGGGCATCTTGCTGGAGCTACCTTGAATGGTAAAATATTTGCTATTGGTGGGGGTGATGGGTCTCAGTCTTTTTCAGAAGTAGAGATGTTTGATCCAGCAGTGGGGAAATGGATATACAGTTTGTCCATGCAGCAACCTCGATGTGCTCCTGCTGCGGCTGAATTAAATGGCGTTCTCTATGTAATTGGTGGTTATGATGGCAACATGTCAGCAGAAAGGTATGATCCAAGGGAAGGCTTCTGGACCCAACTTCCACGTATGCGGACAAGAAGAGGATCCCATTCAGTAGTTGTCTTGGGGGATTCACTACATGCTCTGGGTGGCCTGAATAGAAATACCACGTTTTCCAGCGTAGAGATTTTTGACACCCGTGCCAACTCATGGAGAAGGGGGAGCCCACTCAGCGTCCCAAGAGCACACGGATGTGCGGTTACATTGGACGGCAACGCATACCTCATTGGTGGTATCCAAAGCAGTGAAGAATACGTTGAAACTGTTGAGGTTTACAAGGAGGGCCAAGGCTGGTCCATCTCTGGTTCCAAGGCATTCGGGAAGAGAGCTTTCGCATGCGCCGTTGCCATTTGA</cdnaseq>

Protein Sequence

<aaseq>MGAGKKTQTENEFRELPEKELGGVVFCCNNNTFDECFTKQLFGLPQRNILYVKNVKPGLPLFLFNYSNRQLHGIFKATSTGQLNIDRFAWMSEQSNDAKTNAKTTPFPAQVRFSTRTECPPLPESKYKSVIINNYRKDKPSHFRFELDHRQTRDLISLFLPAPVRANQNKLSIPKPPATAHTVPNPWNRPLPFLTAKAPVVSDKVKSESNVKDVDQFNVSSHSHDIVPHTLPDVEVDLASTSTTSRSNLNKDASGCDDLVAGLIKEDKESVDDDQHAKMDLPVKLQELSSLQQKEANFLEDAPVSTSAQSIRQDTRFAATLPKDSFNATSQCDTSLKDTSFVQCHEYAELYQIINDLSKKTEEMEKMKVDSDQEILLLKKLVKVMERKVEHLEQQLEKSHSSSAPLFGVTNDDVEGPSILLTGGHNGINWLSSLDSYCPATDILETLMPMSSARAYAAVATLKDHVFIFGGWNGIRSLWYNTVECYNRGANKWIGLPCLNHEKGHLAGATLNGKIFAIGGGDGSQSFSEVEMFDPAVGKWIYSLSMQQPRCAPAAAELNGVLYVIGGYDGNMSAERYDPREGFWTQLPRMRTRRGSHSVVVLGDSLHALGGLNRNTTFSSVEIFDTRANSWRRGSPLSVPRAHGCAVTLDGNAYLIGGIQSSEEYVETVEVYKEGQGWSISGSKAFGKRAFACAVAI</aaseq>

Gene Sequence

<dnaseqindica>1..127#291..493#571..1287#1405..1461#1703..2045#2123..2322#2992..3059#3159..3260#3452..3638#3749..3838#ATGGGTGCTGGAAAGAAGACTCAGACCGAGAACGAGTTCCGTGAGCTCCCGGAAAAGGAGCTAGGAGGGGTGGTCTTTTGTTGCAATAACAACACATTCGATGAATGCTTCACTAAACAGTTATTTGGTTAGTAAAAGTCCCTTTTCGCCTGTCCTAATTTCATCTAAATGATATGTAAAATCCATACGCGTGTGATTACTTTTATTCAAGAACATTGACATTGCTAATCAACATTCTTTTGAACTTCTCGTTTAATTGGGAATCCATTCGTTTGCCTTGTGTTTGATAGGTTTGCCTCAACGCAATATCTTGTATGTGAAGAATGTTAAACCTGGCTTGCCTCTCTTTCTGTTCAATTATAGTAACAGACAATTGCATGGCATTTTCAAGGCTACAAGCACTGGCCAGCTTAATATCGACCGATTTGCTTGGATGTCTGAACAGTCTAATGATGCAAAGACAAATGCAAAGACAACACCATTTCCTGCACAGGTATAATAGAAACAACATATACTGGTCTTTGTTCTGGTTATAGTTTCATAAGCATTGTGAGTATTTGTGTTCTTCAGGTCCGCTTCTCTACCAGGACAGAGTGCCCTCCACTTCCAGAAAGCAAATACAAAAGTGTAATCATAAACAATTATCGCAAGGATAAACCTAGCCACTTCCGTTTTGAGCTAGACCATCGACAAACAAGAGATTTGATTTCTTTGTTTCTACCTGCTCCTGTTCGCGCTAATCAAAACAAACTTAGTATTCCAAAACCTCCTGCTACCGCTCATACTGTTCCAAATCCATGGAATCGACCTCTGCCATTTCTTACAGCAAAAGCACCTGTTGTTTCTGATAAAGTGAAGAGTGAATCCAATGTGAAGGATGTGGATCAGTTCAATGTTTCATCACACTCACATGATATTGTTCCTCATACCTTGCCTGATGTAGAAGTCGACCTTGCTAGCACAAGTACAACATCAAGGAGCAACCTTAACAAAGATGCTTCTGGCTGTGATGACCTGGTTGCTGGTTTGATCAAGGAAGATAAAGAATCTGTGGATGATGACCAGCATGCTAAAATGGATTTACCAGTAAAGCTGCAAGAGCTGTCTTCTTTACAACAGAAGGAAGCCAATTTCTTGGAGGATGCTCCTGTTTCTACTTCAGCTCAAAGCATACGTCAAGATACACGGTTTGCTGCTACTCTCCCCAAAGATTCATTTAATGCCACATCTCAATGTGACACATCATTGAAAGATACATCCTTTGTGCAATGCCATGAATATGCTGAGGTGCCTTAAGCTATTCCATCCCTTATTACCATTTTCCCTTACGCACCATATTTCAGTGCTACAACTTATATATTTTGGTGCGATGTTTATGGCCTGCTTTTTGGCATTTGTCTGTAGCTGTATCAAATTATCAATGATTTATCCAAGAAGACCGAAGAAATGGAAAAGATGAAGGTACTTTTCTTCTTGCTTAAAATCAGTAGGATCTTCTCTTTTAAAGAAGAAAAGGTATAAATAGATGAACCCGTTTTCCTAATTGGTTTTATCTCTTGTCAGTATGTCTGGTTTTGTGGGTTTTAAACCATGTTCAAATTTTAACCGGAAAACCAAACTAGTATATATGTGTTTGATATTGAGTTAATTACGCTGTTCAAGTGTGCAAACTCCGATCTTGATTATGGTTTGAACGTTCTAGGTTGATTCAGATCAAGAAATTTTGTTGTTGAAGAAATTGGTAAAGGTTATGGAAAGAAAAGTTGAACATCTGGAACAGCAGCTTGAGAAATCGCATAGCTCTTCAGCACCACTCTTCGGTGTAACAAATGATGATGTAGAAGGGCCATCAATACTCCTAACAGGTGGCCATAATGGCATTAACTGGCTGTCATCCCTTGATTCATATTGCCCTGCAACGGACATACTAGAAACTCTAATGCCGATGAGCTCAGCCCGTGCATATGCGGCTGTTGCCACATTAAAGGACCATGTCTTCATTTTTGGTGGTTGGAATGGCATTCGCAGTTTGTGGTACAACACAGGTAAACATTCTTCAACATGCCAAACGTAGTGCTCTATATAAGCAAGCTGTTGACCATCTGCATTTGTTTTATTGCAGTGGAGTGCTACAACAGGGGAGCCAATAAGTGGATAGGATTGCCCTGCTTGAATCATGAGAAAGGGCATCTTGCTGGAGCTACCTTGAATGGTAAAATATTTGCTATTGGTGGGGGTGATGGGTCTCAGTCTTTTTCAGAAGTAGAGATGTTTGATCCAGCAGTGGGGAAATGGATATACAGTTTGTCCATGCAGCAACCTGTATGGTTCTACTTCTACTCCCTTATAACACTTGTATAGAGTAGAATGTACCAGCCTTTTTGGCCAATTTAATAGGGTCCTGGTCTTCGCTATGTTCTCACTGTGATTTTCTTGATAAGGCTCAAGATTTATTAGATGGCCCAGGAAAAAAACATGTTGTGAAGAGAGGCTGTTTGAACTGCATTTCCTATAATCACTTACATCTTTGGGTTCTTAATCTTTTACAAGATGAATAGTGCTGCTCACAGAACAGTTTCTACTATTATTTCAATCATTTCTTACGTGTCGTAAATCAGTAAAAAAGTTTGTTCTCGTGGTGAACTATGCTGAGTGATTTAGAATTTAGATAGCTGTTTGAGCAGTAGTGGGCAAGCTGACTGTGAGTTGGACATTCGCTTGAGCACTAGTCTTACAGGGTTGGTTGGACCATTTGCAAATCTAATCTAAGCTACATTTTGAGCACTTGAATAGGCAATAAATATTTTTCAAATTCAGGCTATTTCAAATTATGGAATGCAAATTGCAATTCATGTAATTTCATGGGATTTATGAGGCATATACATTGTAACTTTCCATTTCACCTTGCATGAAATATTATCCCATATTTTTAATGTATTTTTATTTTTGACCAATATACCCACCTCACCAACATGTATTTTATTGTTCCAGCGATGTGCTCCTGCTGCGGCTGAATTAAATGGCGTTCTCTATGTAATTGGTGGTTATGATGGCAACATGTACTTACAGTTACGATCCACCCTCACCATTCTCTCCATGCTTTACTTGATTTTGATTCTGAGACCTTCCTATTGAATGATTGATCCTCATATGCACAGGTCAGCAGAAAGGTATGATCCAAGGGAAGGCTTCTGGACCCAACTTCCACGTATGCGGACAAGAAGAGGATCCCATTCAGTAGTTGTCTTGGGGGATTCACTGTGAGTTTCGCTCGCTTTATCTGTGTGTGTAATCAACAGAGAGGTCATGTGATTTCAAAAAAACACACACACAGATTCCACCTGGCAGTTAGATGCTACTATTAGCCTTATATCACTATCTTTTATTTGACGTCTCGATATAAACCTGATAATATACGACTTAACATCCAACATGGGAATTTCATTTTCAGACATGCTCTGGGTGGCCTGAATAGAAATACCACGTTTTCCAGCGTAGAGATTTTTGACACCCGTGCCAACTCATGGAGAAGGGGGAGCCCACTCAGCGTCCCAAGAGCACACGGATGTGCGGTTACATTGGACGGCAACGCATACCTCATTGGTGGTATCCAAAGCAGTGAAGAATACGTTGAAACTGTGAGTTCTTTCCCAAGATCACTCTCTCCATCATCCATTGCTGTTGCTTCAACTCGCCGAACTCTCACATCCTTCTCTCGTTTTATTTTGTTTTGTTTTTTATTTCACAGGTTGAGGTTTACAAGGAGGGCCAAGGCTGGTCCATCTCTGGTTCCAAGGCATTCGGGAAGAGAGCTTTCGCATGCGCCGTTGCCATTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002325

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA002325&oldid=40049"