BGIOSGA002376

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Revision as of 10:35, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA002376| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA002376, complete gene.| tag = OS01G01...")
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Gene Name

BGIOSGA002376

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002376, complete gene.

LocusTag

OS01G0153200

Ensembl Transcript ID

BGIOSGA002376-TA

Ensembl Protein ID

BGIOSGA002376-PA

Length

4532

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:3345031..3349562

Sequence Coding Region

3346938..3349562,3346721..3346806),complement(3345522..3345681,3345031..3345204

Genome Context

<gbrowseImage1> name=IndicaChromosome01:3345031..3349562 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:3345031..3349562 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTTAAGCTCCTCGCCGACATCCTCCACCACACCCCGCCTTCCACCTGGCCGTCCGCCCTCGCCGCCTCGCTGCTCCGCGGCCGCCTGGCCTCCGCCCACGTCTCCTCCCTCCTCCTCCTCCCGCCGTCGCTATCTCGCCCCGATCTCTCCCGCCGCTTCCTCCTCCTGCTGCCGCCCCACCTCGTCTCCCCGGTGTCACTGTCTCTCCTCGCCCTCTCCTTCCTGTCCTCCTCGCCGTCCTCCTCGTCGTCGTCATTCTCCTCCCGGCACGCCGCCTCCCTCCTCCTCTCCCTCGCGTCCTCCGCTCCGTCTGCTTCCTCCTCATTCTCGTCTCTCTCCCACGCTTCCTCCCTCTCGGCCTTCCCGCCAGGCGCGGCCTCCACCGCCGCCGCGCTGCTCGCCTCGTCTTACCTCCGCCTCCGCCGCGCCCGCGACGCCGCCGCCGTTCTTGGCCTCTCCCTTTCATCGGGGATTACTGTTAACCAATATACCGCTTCTCAGATATTGTTCTCTCTTGTCAAGATTCGGCAGTTCGCTCTTGCCCGGGACCTGTTTGATAAAATGCTCCAGTCCGGTGTTCATCTGGATGAGTATGTTTACACGGCAGGCATTCGAGCCTATTGCGAGTCCAGGAATCTAGATGGTGCGAGAGGGTTGGTGGTAAGGATGGAAAGCGAGGGGGTCAAGGCCAGCGCTGTGCCTTACAATGTATTGATGTATGGCTTATGCAAGAATATGCGCGTTCAGGAGGCTGTGGAGGTGAAGAATGTCATGGTGAACATAGGAGTGACAGCCGATGAAGTGACATACCGTACTCTGGTCTATGGTTTTTGTCGGATGGAAGAGCTGGAAATGGCACTGAGGATAACACATGACATGATCAGGCTTGGTTTTGTGCCATCAGAGGCTAATTGCTCATTTATGATTGACGAGCTACGCAAGAAGGAGCTGGTTGAGGAGGCATTCAGTTTAGCTTGTAAATTGGGTGATTTGGGCATGGTACCAAATGTGTTTGCATACAATGCATTGATTGACAAACTGTGCAAGAATGAAAGGTTTGACGATGCAGATAGGCTCTTTAAAGAGATGGCGGGCAGGGGTCTGGAGCCAAATGAGGTGACTTATGCTATATTGATACATGCCCTGTGCAAGAGAGGGATGATAGAAGATGCACTTTGTTTGTTCGATAAGATGAGGGATAAGGGTATCAAAGTGACAGTTTATCCATACAATTCCTTAATCAATGGTTACTGTAAACAGGGTTCTTTGGATCGGGCAAGGGGACTTTTGAGTGGTATGGTTAAGGAGGGATTGACACCAACTGCAGCATCATATTCTCCCCTAATAGCTGGTTTATGTAGGAATGGAGATCTGTCTAGTGCCATGGAACTCCACAGGGAGATGGCTGAGAGGGGCATCGCATGGAATAATTATACTTTCACAGCACTTATCAATGGTTTCTGCAAAGATAAAAAAATGGATGAAGCTGCTAGGCTGTTTGATAAAATGATTGACAGCAATGTAATACCAAATGAAGTGACCTTTAATGTTATGATAGAAGGGTATTGCCTTGTTGGAAATATAAGAAAGGCATTCCAGTTATATGATCAAATGGTGGAAATGGGGCTCAAACCTGATAATTACACTTATAGATCATTAATAAGTGGACTTTGCTTGACCAGTGGAGTGTCAAAAGCAAATGAATTTGTTGCTGATCTAGAAAATAGCTATGCTGTGCTAAACAACTTTAGCCTGACAGCGCTTCTGTATGGATTATTTAGAGAAGGAAGGTTCACTGAAACATACCATCTTTGGGATGAGATGGCAGTGCGAGGAGTCAAGCTTGATCTTGTCAGTTTTACCATAATCGTGTATGCTGCTCTGAAACAGCATGATAAGGAAAAATCATGTGTGCTATTTAGGGAGATGAAAGAACAAGGTGTCAAGCCAGATGATATATTCTACACATGCATGATTGATGCACTGTCAAAGGAAGAAAATATGATCCAAGCTTTAAACTGCTGGGATCAGATGGTTATTGATGGCTACTCTCCAAACACTGTAACACATACAGTCTTGATAAATAATCTCTGCAAGTCAGGGTATTTGGGCAGTGCAGAGCTCCTCTGTAAAGAGATGTTAGCTGGGAATGTTCTTCCAAATAAATTTACCTATAATTGTTTTCTTGATTATTTTGCAACTGAAGGGGACATGGAAAAGGCCAAAGATCTCCATTCAGCCATGCTTCAAGGCCATCTAGCTAGCATAGTGTCATTTAACATATTGATCAAGGGCCTCTGCAAGGCTGGAAAGATCCAAGAGGCAATTGACCTTATGAGAAAGATCACTGAAAGTGGTTTCTCTCCAGATTGCATCAGCTATTCTACAATAATACATGAGCTCTGTAAGATGGGTGATATAAACAAAGCATTTGAGCTTTGGAATGAAATGCTCTACAAGGGATTAAAACCTGATGTTGTAGCATACAACATTTTTATACGGTGGTGCAATGTTCATGGTGAATCTGATAAGGCTTTGGGAATATACACTAATATGATTAGAAGTGGGGTGCAACCAAACTGGGATACGTATAGAGCTCTTCTCTCAGGAATTTCTCTGATGCTACATTATGACTTCAGTTGCTTCAGAGGGACAAAACAATACATACAAATTTCTGTATATGAGCTCATGGATTCTACACATAACAAGTCACATAGGCGAATATGGTTTGTTGATGATCACAAGTCTGGTGAAATAATCCTTGAGTTTGATGGTAGACTGAACAAATGGGGCGTCATCAGCTTCCGTTCTGATGTTAAAGTCAAGAAATTGAGTCCTGGACCGCAGGTCTCTTTCCCTACACACCAGTCTGGCTACATGCCTACATCGCCCTCACTACTTCTGCCGGTACCGTGGATCATGATTCATGAAAGAGGCAAGGAGAAAGCATATGGGAGAAAATGTTCTGGGATTCTTCTAACAGAGAGATTTATCTTGGATGACACTAGTATCACTGTATCAGGATTCGTATACATGCAGTGA</cdnaseq>

Protein Sequence

<aaseq>MVKLLADILHHTPPSTWPSALAASLLRGRLASAHVSSLLLLPPSLSRPDLSRRFLLLLPPHLVSPVSLSLLALSFLSSSPSSSSSSFSSRHAASLLLSLASSAPSASSSFSSLSHASSLSAFPPGAASTAAALLASSYLRLRRARDAAAVLGLSLSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISLMLHYDFSCFRGTKQYIQISVYELMDSTHNKSHRRIWFVDDHKSGEIILEFDGRLNKWGVISFRSDVKVKKLSPGPQVSFPTHQSGYMPTSPSLLLPVPWIMIHERGKEKAYGRKCSGILLTERFILDDTSITVSGFVYMQ</aaseq>

Gene Sequence

<dnaseqindica>1..2625#2757..2842#3882..4041#4359..4532#ATGGTTAAGCTCCTCGCCGACATCCTCCACCACACCCCGCCTTCCACCTGGCCGTCCGCCCTCGCCGCCTCGCTGCTCCGCGGCCGCCTGGCCTCCGCCCACGTCTCCTCCCTCCTCCTCCTCCCGCCGTCGCTATCTCGCCCCGATCTCTCCCGCCGCTTCCTCCTCCTGCTGCCGCCCCACCTCGTCTCCCCGGTGTCACTGTCTCTCCTCGCCCTCTCCTTCCTGTCCTCCTCGCCGTCCTCCTCGTCGTCGTCATTCTCCTCCCGGCACGCCGCCTCCCTCCTCCTCTCCCTCGCGTCCTCCGCTCCGTCTGCTTCCTCCTCATTCTCGTCTCTCTCCCACGCTTCCTCCCTCTCGGCCTTCCCGCCAGGCGCGGCCTCCACCGCCGCCGCGCTGCTCGCCTCGTCTTACCTCCGCCTCCGCCGCGCCCGCGACGCCGCCGCCGTTCTTGGCCTCTCCCTTTCATCGGGGATTACTGTTAACCAATATACCGCTTCTCAGATATTGTTCTCTCTTGTCAAGATTCGGCAGTTCGCTCTTGCCCGGGACCTGTTTGATAAAATGCTCCAGTCCGGTGTTCATCTGGATGAGTATGTTTACACGGCAGGCATTCGAGCCTATTGCGAGTCCAGGAATCTAGATGGTGCGAGAGGGTTGGTGGTAAGGATGGAAAGCGAGGGGGTCAAGGCCAGCGCTGTGCCTTACAATGTATTGATGTATGGCTTATGCAAGAATATGCGCGTTCAGGAGGCTGTGGAGGTGAAGAATGTCATGGTGAACATAGGAGTGACAGCCGATGAAGTGACATACCGTACTCTGGTCTATGGTTTTTGTCGGATGGAAGAGCTGGAAATGGCACTGAGGATAACACATGACATGATCAGGCTTGGTTTTGTGCCATCAGAGGCTAATTGCTCATTTATGATTGACGAGCTACGCAAGAAGGAGCTGGTTGAGGAGGCATTCAGTTTAGCTTGTAAATTGGGTGATTTGGGCATGGTACCAAATGTGTTTGCATACAATGCATTGATTGACAAACTGTGCAAGAATGAAAGGTTTGACGATGCAGATAGGCTCTTTAAAGAGATGGCGGGCAGGGGTCTGGAGCCAAATGAGGTGACTTATGCTATATTGATACATGCCCTGTGCAAGAGAGGGATGATAGAAGATGCACTTTGTTTGTTCGATAAGATGAGGGATAAGGGTATCAAAGTGACAGTTTATCCATACAATTCCTTAATCAATGGTTACTGTAAACAGGGTTCTTTGGATCGGGCAAGGGGACTTTTGAGTGGTATGGTTAAGGAGGGATTGACACCAACTGCAGCATCATATTCTCCCCTAATAGCTGGTTTATGTAGGAATGGAGATCTGTCTAGTGCCATGGAACTCCACAGGGAGATGGCTGAGAGGGGCATCGCATGGAATAATTATACTTTCACAGCACTTATCAATGGTTTCTGCAAAGATAAAAAAATGGATGAAGCTGCTAGGCTGTTTGATAAAATGATTGACAGCAATGTAATACCAAATGAAGTGACCTTTAATGTTATGATAGAAGGGTATTGCCTTGTTGGAAATATAAGAAAGGCATTCCAGTTATATGATCAAATGGTGGAAATGGGGCTCAAACCTGATAATTACACTTATAGATCATTAATAAGTGGACTTTGCTTGACCAGTGGAGTGTCAAAAGCAAATGAATTTGTTGCTGATCTAGAAAATAGCTATGCTGTGCTAAACAACTTTAGCCTGACAGCGCTTCTGTATGGATTATTTAGAGAAGGAAGGTTCACTGAAACATACCATCTTTGGGATGAGATGGCAGTGCGAGGAGTCAAGCTTGATCTTGTCAGTTTTACCATAATCGTGTATGCTGCTCTGAAACAGCATGATAAGGAAAAATCATGTGTGCTATTTAGGGAGATGAAAGAACAAGGTGTCAAGCCAGATGATATATTCTACACATGCATGATTGATGCACTGTCAAAGGAAGAAAATATGATCCAAGCTTTAAACTGCTGGGATCAGATGGTTATTGATGGCTACTCTCCAAACACTGTAACACATACAGTCTTGATAAATAATCTCTGCAAGTCAGGGTATTTGGGCAGTGCAGAGCTCCTCTGTAAAGAGATGTTAGCTGGGAATGTTCTTCCAAATAAATTTACCTATAATTGTTTTCTTGATTATTTTGCAACTGAAGGGGACATGGAAAAGGCCAAAGATCTCCATTCAGCCATGCTTCAAGGCCATCTAGCTAGCATAGTGTCATTTAACATATTGATCAAGGGCCTCTGCAAGGCTGGAAAGATCCAAGAGGCAATTGACCTTATGAGAAAGATCACTGAAAGTGGTTTCTCTCCAGATTGCATCAGCTATTCTACAATAATACATGAGCTCTGTAAGATGGGTGATATAAACAAAGCATTTGAGCTTTGGAATGAAATGCTCTACAAGGGATTAAAACCTGATGTTGTAGCATACAACATTTTTATACGGTGGTGCAATGTTCATGGTGAATCTGATAAGGCTTTGGGAATATACACTAATATGATTAGAAGTGGGGTGCAACCAAACTGGGATACGTATAGAGCTCTTCTCTCAGGAATTTCTCTGATGGTCAGCAAGGGGCAGGCATTGCTGCTGACCACCTGATGTCTAGGGCAGTGCATTTCAGGCTCTCATCTAATGGCATAAGTTGCTATCATTCATCTAGAACAGGATCCATCAAATAGTTCCCTGAACTGTAGCTACATTATGACTTCAGTTGCTTCAGAGGGACAAAACAATACATACAAATTTCTGTATATGAGCTCATGGATTCTACACATAACAAGTAAGCAATTTAAGACAATTACTTTTCTACCAAATGTATGTTGTCCACAATCTTGCAGATAGTATTGTACCATTTGTACATTTGAGCTATCAGATTTTAATTTGACAGTACCTTTACTGCTTTACATTCTTTACTTCAAGAAAAAGTGTTTTTTTGTTAATGAATGTTTTTTTTTTCTTATTTCATGCCATCTTACTATTGATGTTTCCTGTTAAGACTGAAATAGTGTTATTAAGACACATTCGTCTTGGTAAAAGTTCTATAGATTCCAAGCTTAAAAATTCATTATCAACTGTTTGGACTTTACATTCAACATTGCTAAGACAACAATTATTTCCAACTTCGCAATTTTACATAGCCTTGTCTGAAAATATAAAAAAGGAGATTACACAATTTTAAGGGATTTATTTTGATCTAGTTACATAGACACATCTAACACCATTTAAAATTTTCAACAGTGTCATAACGTGCTTGGGGTTTCTGAGCCAGTGTAACAGAATCTTTTTGATGCTTGATCTTATGGCTAATACCGCTAATGTTGATCTACCCAAACTTGCTTGGGACTAGAGGCTGATATTGTTGTTGGTGGTGTTGTTAGTGCTGATTTTAGGCTACAAGATTTCATGCTTCAATGAGATAGTGCCACAGGATATATTTCCAGGAAATTCTGTTTCCTCAAGACCTAAGCTGTACGAGCATAACATCCCCTTCAGATTCTGCATGGCACACGCTATCCATTCTTTTCTTCTTTTTTTTTTTTGTGAAACTTACTCATCTTGACAATTTAATGTACTATTCTGTACCAGGGAAAGGAAAACTGAACTCTCATTGTGTACCAGAGAATCGTAGTAGAAGCAAATTATGATCGGGATTCAGGCTGTTGTCAAAGGTTACCCATCAAGTCGGTATATATCGCATTGTGTCTTCTTTGAGCGTATACCCCCTTACTCATTTTTAATCTCTAGATGTATAAAACAATGGTCATCATAACTTGACAGAAACGCCACTGTAACTAATATTGTTGCGTTTCTGATTGCAGGTCACATAGGCGAATATGGTTTGTTGATGATCACAAGTCTGGTGAAATAATCCTTGAGTTTGATGGTAGACTGAACAAATGGGGCGTCATCAGCTTCCGTTCTGATGTTAAAGTCAAGAAATTGAGTCCTGGACCGCAGGTCTCTTTCCCTACACACCAGGTTAGTTCATACAACTATCAATAACATATCTGGAAATATCACTTAGTTAAGATGCTTCTATCTTTTAGCAAGATTTTTCAGGGTACTTCATTATTTTCAAAGGGCTGAAAAAAAACTCGTTTAGCTGGCCTGGTTCAAAATTGCTCTGATTGATGTGATTATTCTTTTAAAATGAAAACTAGTCAATTTTGAATGAAATGTGTTTTTATTTTGGCTCGGCTCATTAACAAGAAATTATAGAAAAATAATTTTGAAGAAAGCTCGATAAAAAGCTGACCAAGCTTTTTCCCATCCCTTTATTGTTGTGCTGTTTGCAGTCTGGCTACATGCCTACATCGCCCTCACTACTTCTGCCGGTACCGTGGATCATGATTCATGAAAGAGGCAAGGAGAAAGCATATGGGAGAAAATGTTCTGGGATTCTTCTAACAGAGAGATTTATCTTGGATGACACTAGTATCACTGTATCAGGATTCGTATACATGCAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002376