BGIOSGA002397

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Revision as of 10:35, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA002397| Description = 40S ribosomal protein S26| Definition = Oryza sativa Indica Group BGIOSGA002397, complete gene.| tag = OS01G0147900| ...")
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Gene Name

BGIOSGA002397

Description

40S ribosomal protein S26

Definition

Oryza sativa Indica Group BGIOSGA002397, complete gene.

LocusTag

OS01G0147900

Ensembl Transcript ID

BGIOSGA002397-TA

Ensembl Protein ID

BGIOSGA002397-PA

Length

3198

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:3022743..3025940

Sequence Coding Region

3025902..3025940,3024966..3025041),complement(3024709..3024832,3024270..3024354),complement(3023867..3023999
,3023291..3023385),complement(3023083..3023161,3022883..3022965),complement(3022743..3022790

Genome Context

<gbrowseImage1> name=IndicaChromosome01:3022743..3025940 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:3022743..3025940 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGCCGCAAGTTCTTCGTTGGTGGCAACTGGAAATGCAACGGGACCACTGATCAGGTGGACAAAATTGTGAAAATTCTGAATGAGGGACAGATTGCTTCTACAGATGTTGTTGAGGTGGTTGTCAGCCCACCTTATGTGTTCCTTCCCGTGGTCAAGAGTCAGCTGCGCCCGGAGATCCAAGTTGCTGCTCAGAATTGTTGGGTGAAGAAGGGCGGGGCTTTCACCGGTGAGGTCAGCGCTGAGATGCTTGTCAACCTTAGTATTCCCTGGGTTATTCTTGGACACTCTGAAAGGAGGAGTTTGTTGGGTGAATCAAATGAGTTTGTTGGAGACAAAGTGGCATATGCGCTCTCTCAGGGCTTGAAGGTCATTGCATGTGTTGGTGAGACTCTCGAGCAGCGGGAATCTGGATCGACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTTCTGAAAGGATCAAGGATTGGACTAATGTGGTTGTTGCCTATGAACCTGTGTGGGCCATTGGAACTGGTAAAGTTGCTACACCAGATCAAGCACAAGAAGTGCATGATGGCCTGAGGAAGTGGCTCGCTGCTAATGTCAGTGCAGAGGTTGCTGAATCAACAAGGATCATCTATGGAGGTTCCGTAACTGGTGCGAACTGCAAGGAGCTGGCAGCAAAGCCTGATGTTGATGGTTTTCTCGTCGGTGGTGCTTCATTGAAGCCTGAATTCATCGACATCATCAACTCCGCCACCGTGAAGTCCGCCTAA</cdnaseq>

Protein Sequence

<aaseq>MGRKFFVGGNWKCNGTTDQVDKIVKILNEGQIASTDVVEVVVSPPYVFLPVVKSQLRPEIQVAAQNCWVKKGGAFTGEVSAEMLVNLSIPWVILGHSERRSLLGESNEFVGDKVAYALSQGLKVIACVGETLEQRESGSTMDVVAAQTKAISERIKDWTNVVVAYEPVWAIGTGKVATPDQAQEVHDGLRKWLAANVSAEVAESTRIIYGGSVTGANCKELAAKPDVDGFLVGGASLKPEFIDIINSATVKSA</aaseq>

Gene Sequence

<dnaseqindica>1..39#900..975#1109..1232#1587..1671#1942..2074#2556..2650#2780..2858#2976..3058#3151..3198#ATGGGCCGCAAGTTCTTCGTTGGTGGCAACTGGAAATGCGTAATTTTTTTCTCTTCCTGCTTGAAATCTCTAGTCGCATGTTCTTGTGTCTCGGTGACTCAGGAGAATTTTTGATTTTTTTTCTGTTCTGGAACGCGATTTAGTGATTTAAGGGTGGAGATTGCCATGAAGGGGATGGATCTTTTTTTTTCTTGAAACATTAGGAGAGATTTTTCCACGCTGATCCAGATCGGTGTAGAAACCACCCTGGTTGGTTGAGAAGAGTGGATGGATGGCGGGGTTTTTGAGATCCGGATAATATATCTGAAGATTTGGTCTTCGTTTTCAGTCCGGTCCTAATCCTAGGAACCAGATGCGATTAGCTGCTACATATGCTACTCCTACACGATTAGCCGCGTTTTTTGGCGTTTCAACGCGAGACACTCTTAGTGGGAAATTTGGAGTTCACTGATCTTCAGGTGTTCCATCTTGCGCAAAGTGTGATGTCGGGTATGTTTAGCTCGGTTCAGACTTCAGAGTCTGAAACTTTTATGAGGTGCATGCGTGTATTATCCAGTGTCTAGAATTTGTCTCTGACGTGAATTATCAAGTGTCTAGAATTTAAGTCAGATCAAGGAGCCAACACCCGGAGATTTATTAATCAAATGGTGCATATTAGCTTTTGTCAATCGTGATTTCTAGCTTTGAACTGTTGTTAACTTACACAAGAAACGCGTCATGCACTTGGAGAACGGTAGTGGTATTGATGCTTCTTGTCGAATTTCTCGTATGCATATATGCTGAGAAATGCGAAAGAAAAGCACGGGTATTTTGTGTGATTTCAATGTCGTAGTGTGGTCTGTATCAATCTTCAAATATTTGCTTGCTAAAGACTGACATGATTCATTTTGATGTAATAGAACGGGACCACTGATCAGGTGGACAAAATTGTGAAAATTCTGAATGAGGGACAGATTGCTTCTACAGATGTTGTTGGTATGTGGGACTACGTTGCAGATTGATTCCTTTTAAGTTCGATATTTTCTGTTTTTATCATTCCCACGAAATCTGTATACAAAAAAACTGCATGGTAGGACATGCTTATCAATCTGGAACCATTGTGCTGCAGAGGTGGTTGTCAGCCCACCTTATGTGTTCCTTCCCGTGGTCAAGAGTCAGCTGCGCCCGGAGATCCAAGTTGCTGCTCAGAATTGTTGGGTGAAGAAGGGCGGGGCTTTCACCGGTGAGGTCAGGTTAGTTATCAGTTCTGTTTCAGTTGTACACCCAACATGCTGTAATGATCACCAGAAGGTTAGCTACAAACCTACTTGCAGAAAGATGCGCCATTACGCTGTTTGATTAGGTCTCATATTTAACATCACCCAGAAACAATGCCATCTTTTCAAGCTAGCATGCCATCTTTTCAAGCTAGCCTGCCTTCACTTGGTATTACATGTTGCATGTTGTTATATTTGCTCAGTCACAGTTAGTGTTGTATGATTGGCAGTCTCAATAGCCGTCTTCGCTTTTAGGCGAGGTTATAAGCCATTCACCATTGAACTCATCTTTTGTTTAAGTTGGTTGTTAATCTATTATTTTTAATGCAGCGCTGAGATGCTTGTCAACCTTAGTATTCCCTGGGTTATTCTTGGACACTCTGAAAGGAGGAGTTTGTTGGGTGAATCAAATGAGGTATGATCTAGTTTACATTCTATGAAATGTGCAGATATGAATTTTGTATAGTTTTAGCTGGAAATAGTGCAACAAGCCAAACCTGGGGATAACGGTCACTGGAGACAATATTGTAGCTACTTAGCTGGCACTAAATTTGATCCTAATCCAATATATCACCAACTTAATTTTACAAAGGTGATCTTGTTCGCTACAAATTGGTGGATGATCTGCTGTGAGGTTTTCGTATCATAATCATCTAATGGTTTCCTGCTCTTTCCTGAATTGCAGTTTGTTGGAGACAAAGTGGCATATGCGCTCTCTCAGGGCTTGAAGGTCATTGCATGTGTTGGTGAGACTCTCGAGCAGCGGGAATCTGGATCGACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTTCTGGTATCTAACCTCTACTTTTGGTCTTTTTGACTCTGTTGAATTCCTTATCCATTTGTGTACTCGTTTGATCTAAATGGTTTGCAGTTCGCCTATATGTTCAAATGGTATCTAGGATAATTTTCCATTCATTGAAGCTTTATCTTGCGAAAGTTAGTTAGATCTCTTTTGATGCACTACTCATTTCTTGTTTGGCTAAATTCTACACATTCTACATCAGAAAAAAAAAATCTTGCTAAAAGTCTTATAAGCCACTTGGTTATCACATATTCACTATGTGGGAGCACTCTAAAAATGGGAACATCTGGTGATCAGATGAATCCACAGGCAGTAATGTAATGTAATAGTTCAAGTGATTACTTGTTCAAGTGGTTAATGGTTTAATCTAGACCTTAATGTAATGTCTCATAGTTAGCATCATTTGATAAAAGATTAGCTCATCACATGAGAATTCAGGCTGAAATGACTATGGACTGTTTTACAGAAAGGATCAAGGATTGGACTAATGTGGTTGTTGCCTATGAACCTGTGTGGGCCATTGGAACTGGTAAAGTTGCTACACCAGATCAAGCACAAGAAGTAAGTTTCTTATATTGATAAGCACACAAAGTGTTCATTCATGAACTTCTGCACGTTCCATAATTGTTACCTATGCTCTAGATAAAATATCTTGTTTAAACAACCATCTGGTTTGTATTATTGTATCAGGTGCATGATGGCCTGAGGAAGTGGCTCGCTGCTAATGTCAGTGCAGAGGTTGCTGAATCAACAAGGATCATCTATGGAGGTATAAATCTACAGTATATTTTCTTGAACAAACACCTTACAATTGATTGCACAAGTGCACCTTAGGCGACAACTGTCCTGGTGTCTGGACATGATTGTTTACATGATTTTGCTACAGGTTCCGTAACTGGTGCGAACTGCAAGGAGCTGGCAGCAAAGCCTGATGTTGATGGTTTTCTCGTCGGTGGTGCTTCATTGAAGGTAAAGAATAATACGAACACAGTAGAACGATTGTACAGACATGATTACCCGCCTGATTCACTGAATACCGTCTCCCTTTCTTTGTTCTGTAGCCTGAATTCATCGACATCATCAACTCCGCCACCGTGAAGTCCGCCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002397

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA002397&oldid=40121"