BGIOSGA002419

From RiceWiki
Revision as of 10:36, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA002419| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA002419, complete gene.| tag = P0024G0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA002419

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002419, complete gene.

LocusTag

P0024G09.17

Ensembl Transcript ID

BGIOSGA002419-TA

Ensembl Protein ID

BGIOSGA002419-PA

Length

3056

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:2774635..2777690

Sequence Coding Region

2777529..2777690,2775839..2776015),complement(2775608..2775748,2775321..2775422),complement(2775179..2775249
,2775018..2775085),complement(2774635..2774882

Genome Context

<gbrowseImage1> name=IndicaChromosome01:2774635..2777690 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:2774635..2777690 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCAGACGGAGGCGCGGGTCGGGGTCGTCGTCGACGGCGGCCGCGCCGCCATGGGCCGCCGCCACATCGGCACCGTCGCCCACCTCGCCGCCGGGGGCTTCGCCGGCGCCGTCAGCAAGACCTGCACCGCCCCACTCGCCCGCCTCACCATCCTCTTCCAGGTGGCAGGTATGCATTCAGATGTGGCAGCTCTAAAGAAGTACAGCATATGGCATGAAGCTTCACGAATAGTTCGAGAAGAAGGATTTGGAGCATTTTGGAAAGGCAATCTGGTGACAATTGTGCATCGTTTACCTTATTCTGCCATCAGCTTTTATTCATATGAGCGCTACAAAAAATTTCTCCAAAGGGTTCCTGGCCTTGATGAAGACTCAAATTATGTTGGTGTTGCTCGTTTACTTAGTGGCGGTTTGGCAGGAATTACTGCTGCATCTGTAACTTATCCCTTGGATGTTGTCCGTACTCGTTTGGCAACACAGAAAACAACCAGGTATTACAAAGGCATCTTTCATGCAGTGTCTACCATTTGTAGAGATGAGGGTGTCAAAGGATTGTACAAGGGCCTTGGGGCCACATTATTGGGAGTCGGACCTAGCATAGCAATCAGCTTTACTGTATATGAATCATTGAGGTCTCATTGGCAAATGGAAAGGCCCCAAGATTCCCCTGCAGTTGTTAGTTTGTTTTCTGGGAGTCTATCTGGTATTGCATCATCTACTGCCACATTTCCCCTTGATCTTGTAAAGAGACGAATGCAACTGCAAGGGGCAGCTGGGACATCGTCAGTCTGTAAATCAAGCATAACTGGAACCATCCGCCAAATCTTTCAGAAGGAAGGCCTTCGTGGCTTCTACAGAGGGATAGTCCCTGAGTACCTGAAGGTTGTTCCTAGTGTAGGGATTGCCTTCATGACCTATGAGACCCTGAAGAGCTTGCTCTCCAGCATAGACGAAGATGACGAGAGCTGA</cdnaseq>

Protein Sequence

<aaseq>MQTEARVGVVVDGGRAAMGRRHIGTVAHLAAGGFAGAVSKTCTAPLARLTILFQVAGMHSDVAALKKYSIWHEASRIVREEGFGAFWKGNLVTIVHRLPYSAISFYSYERYKKFLQRVPGLDEDSNYVGVARLLSGGLAGITAASVTYPLDVVRTRLATQKTTRYYKGIFHAVSTICRDEGVKGLYKGLGATLLGVGPSIAISFTVYESLRSHWQMERPQDSPAVVSLFSGSLSGIASSTATFPLDLVKRRMQLQGAAGTSSVCKSSITGTIRQIFQKEGLRGFYRGIVPEYLKVVPSVGIAFMTYETLKSLLSSIDEDDES</aaseq>

Gene Sequence

<dnaseqindica>1..162#1676..1852#1943..2083#2269..2370#2442..2512#2606..2673#2809..3056#ATGCAGACGGAGGCGCGGGTCGGGGTCGTCGTCGACGGCGGCCGCGCCGCCATGGGCCGCCGCCACATCGGCACCGTCGCCCACCTCGCCGCCGGGGGCTTCGCCGGCGCCGTCAGCAAGACCTGCACCGCCCCACTCGCCCGCCTCACCATCCTCTTCCAGGTGAGCGCGTCCCCCCAGCATTTCCCTGCCTGAGATTTCGCCCTTCGTCCGTACGGGCAGTATTGGGGGTGGATGTACTGGATACGGCGAGGAGGAGGAGGGGATTGGGAGCTACTACTACTGCGGAGGCGAATTTTGTTAATTTTCCTTGTCTCGCAAGTGGAATTCGGGGAGGAAGATGTTTCCTCCCCTCCTTTTTTTTTTTTTGGATGTAGGGATTGGTTGGCACGAGCAGCTACGACGTTTGTTACTAATAACCTTGTTGTGTGTTGCTTTAACATGTGTTTAATAAATGATTTGACCATAAAGGAGTCTCCCTTTTGAACACATAAGGATTTCTCTTCCTGTGGGTGAAACCAGTACAATTGTAGGACAGCATACCATGTGTTGTTGTTTTGGAATCCTGTGTGCCCTAATAAGGAACTGGGAGTAAAGAAAGCATAAGACAAATATGACTTCTTTTGTCACTCAGAAACGGTGGGAGTACTCCAGTAGTGAGTAGTGACTGGTGAAAATGTAAGCCTGAGGGAAGCTTTTCTTCGTTTATAAGCGCTGTACCGCTACTTATTGCTTGGCACAAAAGCACCTTGAAAGGAATTGAATTGTAATAGTGAGGTACTATAGTGAAGCATCTTGCTGTTAGATTGTTAGTCGTCAATGGAAGCTAAAAACGGCAGCAGAGTTTTCGTGTATTGACATTTTCTTACTAGTTCAATTCTCCGGTAAAATTTGTATTTATTATGTTGACAACTTTAGATGCAAAATATCGCACTGAAGAATAATTTTCCTTTCTTAGCGTGTTAGAAAACTTTGGAGATTTGGGCACCTATGGAAATCTTATTATATACGTGCCTCAATTTGTGCCCGCACAAGGCTAACGGCAGTTTGGAACAATCCTTTTCATGCCATTGTAGGCGTTCCAGTTAGCAGGGACTGAAATCTAACAGGAACAGAAGGCAAGTATTCCTTTTGTTTCTTTAATTTCAGTCTATTATTGTTCAAAGGGTTATAGGAAAAAAATAGGTTCCCAATGTGATGGCAGCCAGTGGTTTGTATAGAGGCAGGAACATACCATCGTGTGTCGCTGAAGAAAAAGCTTCTTATAAATATTGTTTTTTGCGCATTTAAGTATTCCTTTGTTCACTGTAAAGGTGCCAGAAAGGATCTAATTTGGTATTTTTGTTGTACATACTGATTAGTGCTCAAATTACTTCCATACATGATATAAAGTGTTCTCACCTCACTTTGTATAAAAAATAATTGGTCAACAATAGGTAGTTGGTCCAATCGTGCATCAAGAGCAGCAAATCGATACCATATGGAGTTCCCCTCTTCTCTTACTAGATACAGAGTTGATGCATGGCATTGTTATGCTTAACTATGTGTCTAAACCTTGTGATTCCTGCTTCATAATAACGAGCTACTTATTTCTGTTCTGTGCCTGGTATTAGATTAAATTATAACTACTGAATAAGGTTTGTTATTGCACGTGCTTGACATACTGATCTGACAGGTGGCAGGTATGCATTCAGATGTGGCAGCTCTAAAGAAGTACAGCATATGGCATGAAGCTTCACGAATAGTTCGAGAAGAAGGATTTGGAGCATTTTGGAAAGGCAATCTGGTGACAATTGTGCATCGTTTACCTTATTCTGCCATCAGCTTTTATTCATATGAGCGCTACAAAAAAGTAAGCAGTTCGTTAGCACTTAATGCATGAATTATGATGAGGTTCTGCATTTTATTATCATTAGCTAAATGATGTGAAATATCATTGCAGTTTCTCCAAAGGGTTCCTGGCCTTGATGAAGACTCAAATTATGTTGGTGTTGCTCGTTTACTTAGTGGCGGTTTGGCAGGAATTACTGCTGCATCTGTAACTTATCCCTTGGATGTTGTCCGTACTCGTTTGGCAACACAGGTAATGCTATCCTTTTTCCAAATAAAACATTGCTTATTGATGAATTTAAACATCATCTTTAATATCTCCAAAATATTAATTTTTGTATGATGCAGGCTTCGGGCTTAGTGTATTTTACTTTATTTCAACTATTGGGAGGCTTCATATTTGGCATTCACTAGAAATTTAATCTTAAATTTGTGCAGAAAACAACCAGGTATTACAAAGGCATCTTTCATGCAGTGTCTACCATTTGTAGAGATGAGGGTGTCAAAGGATTGTACAAGGGCCTTGGGGCCACATTATTGGTAGGCCATGAACCTTTTACTGAGATATGTCAATTTTTAAGTTGGGCTGCCAGTAATTTTTGAAGTTACAGGGAGTCGGACCTAGCATAGCAATCAGCTTTACTGTATATGAATCATTGAGGTCTCATTGGCAAATGGAAAGGTGAACATCAATACATCATTATTTCTCTCGTTTGAATAATATTTGAGTATCTATTTTGGTCATTTCCAACTGATGGCTGTGGACGTGCTTCAGGCCCCAAGATTCCCCTGCAGTTGTTAGTTTGTTTTCTGGGAGTCTATCTGGTATTGCATCATCTACTGGTAAGCCATGTTTAACTCCTCTTAACCTTTCTTCTTATTTTTGTAAAACTTTATTGAATAAAGAACACCATGACTTCTGTCATCTGAATACTGACTCACAGCATTTCCATTGGTAAAATGCTATAAATATTGCAGCCACATTTCCCCTTGATCTTGTAAAGAGACGAATGCAACTGCAAGGGGCAGCTGGGACATCGTCAGTCTGTAAATCAAGCATAACTGGAACCATCCGCCAAATCTTTCAGAAGGAAGGCCTTCGTGGCTTCTACAGAGGGATAGTCCCTGAGTACCTGAAGGTTGTTCCTAGTGTAGGGATTGCCTTCATGACCTATGAGACCCTGAAGAGCTTGCTCTCCAGCATAGACGAAGATGACGAGAGCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002419