BGIOSGA002437

From RiceWiki
Revision as of 10:36, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA002437| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA002437, complete gene.| tag = P0443D0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA002437

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002437, complete gene.

LocusTag

P0443D08.15

Ensembl Transcript ID

BGIOSGA002437-TA

Ensembl Protein ID

BGIOSGA002437-PA

Length

4556

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:2331808..2336363

Sequence Coding Region

2335574..2336363,2333171..2333203),complement(2332813..2333073,2331808..2332724

Genome Context

<gbrowseImage1> name=IndicaChromosome01:2331808..2336363 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:2331808..2336363 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCATCCTGCTTTGCTACTGCTCCCCCTCGCCTCCTTGCTGCATGCCGCGGCAGCAATTGGCCACAACGAGACCAGCACCAGTGGCAACACAAGCTGCACGCCGGCGAGATGCGGGAACCTGACCATCAGTTACCCCTTCTCGCTCAGCGGCGTGCAGCCGGTGTCCTGCGGCTACCCGGTGTTGGACCTCACCTGCGACAACCGAACCGGCCGCGCGTTCCTCAGCAGGACGTTCAGGGACCACCTGTTTCGCGTGGACAGTATTTTCTACGAGAATAACTCGCTGGTGGCGGCCGTAGAGACCACCTTCGCCGGCGACGCCGACTGCCCCGTCCCGGATTTCAACGTGACATCCAGCCTCAGTCCCTACCCGTTCATCATCAGCAACACCAACAAGTATCTCGCATTCATCTATGACTGCTCGATTCCTGAACACGTTGGGCAGCTGCAACGGCCATGTGGAAACCGGACGATGGGAGCTTACATCTCCGACAAGTGGAACAGCACACCACCGTCCGGGGTTCGAGGGAACTGCAACTCTGTCAGCGTGCCGGTGCGTGGGTACTATGATGGAATGAAGCCGGTGAGTGGACACTACGAGCAATTGATCAAAGATGGGTTCGTCTTGAAATGGATGAGGTCGGTAATGGGAGATCAAGACTGCGATGGGTGCAGAAGGAGAGGCGGGGAGTGCAGGTTCGAACAGCTTTCGTTCCAGTGCTTCTGCCCCGACGGGTTGCTCTGCTCCAATTCAACCCGTACCAACACAACGTCAAGCCATCCATCAGGCAAGGTTAATCGAGGAGTCAAGATTGCCGCAGGAACCGCAGCGGCTGTTGTATGTCTCGGTATACTTGGCGTTGGCTCCACTGTGTTGTACACCCGGAGGAAGAGGAAAAGATCTGCATCCTTTGAAGGTCTCATCCATGGAGGGACGCCATTGCCATCACTCACGAAAGAATTCAGCCTCGCCGGCTTGGCATATACCCACATCTTCACCTACGAGGAGCTCGACGAGGCTACCGACGGCTTCAGCGACGCCCGGGAGCTCGGCGTCGGCGGCTTCGGCACAGTGTACAAAGGGATACTCCGGAATGGGGACACGGTGGCGGTGAAGCGGCTGTACAAGAACAGCTACAAGAGCGTGGAGCAATTCCAGAACGAGGTGGGCATCCTGTCGCGGCTGCGCCACCCAAACCTCGTCACTCTCTTCGGCTGCACGTCGCAGAGCAACAGCCGCGACCTGCTCCTCGTCTACGAGTTCGTCCCCAACGGCACGCTCGCCGACCACCTGCACGGCGCCGCGGCGGCGCGGTCGGCCTCCCTCGACTGGCCGACGCGGCTCGGCATCGCCGTCGAGACGGCCAGCGCGCTGGAGTACCTCCACACGGTGGAGCCGCAGGTGGTGCACCGCGACGTGAAGACGAACAACATCCTCCTCGACGAAGGGTTCCACGTGAAGGTGGCCGACTTCGGCCTCTCCCGGCTGTTCCCGGCGGACGCCACGCACGTCTCCACGGCGCCGCAGGGCACGCCGGGGTACCTCGACCCGATGTACCACCAGTGCTACCAGCTGACGGACAAGAGCGACGTGTACAGCTTCGGCGTGGTGCTCGTCGAGCTCATCTCCTCCAAGCCGGCGGTGGACATGAACCGGCGCGGCGGCGACGTCAACCTGGCCAACATGGCCATGCACATGATCCAGAGCTACGAGATGGAGCAGCTGGTGGACCCGCAGCTCGGGTACGGGTCGGACGGCGAGACGAGGAGGACGGTCGATCTCGTCGCCGAGGTGGCGTTCCGGTGCTTGCAGCCGGAGCAGGACGTGAGGCCGCCGATCGGGGAGGTCTTGGACGCGCTGAGAGAAGCTCTGCGGATGGACAAGGTAGGCTACGTCAAGGACGACGCCGGGCTGGTCAAGAAGAGCCGAGACGGCTCGCCGGACTGCGTCATGTACCAGTGGATTAGCCCATCCACCACTTCCAATAACAGCAGTTGA</cdnaseq>

Protein Sequence

<aaseq>MHPALLLLPLASLLHAAAAIGHNETSTSGNTSCTPARCGNLTISYPFSLSGVQPVSCGYPVLDLTCDNRTGRAFLSRTFRDHLFRVDSIFYENNSLVAAVETTFAGDADCPVPDFNVTSSLSPYPFIISNTNKYLAFIYDCSIPEHVGQLQRPCGNRTMGAYISDKWNSTPPSGVRGNCNSVSVPVRGYYDGMKPVSGHYEQLIKDGFVLKWMRSVMGDQDCDGCRRRGGECRFEQLSFQCFCPDGLLCSNSTRTNTTSSHPSGKVNRGVKIAAGTAAAVVCLGILGVGSTVLYTRRKRKRSASFEGLIHGGTPLPSLTKEFSLAGLAYTHIFTYEELDEATDGFSDARELGVGGFGTVYKGILRNGDTVAVKRLYKNSYKSVEQFQNEVGILSRLRHPNLVTLFGCTSQSNSRDLLLVYEFVPNGTLADHLHGAAAARSASLDWPTRLGIAVETASALEYLHTVEPQVVHRDVKTNNILLDEGFHVKVADFGLSRLFPADATHVSTAPQGTPGYLDPMYHQCYQLTDKSDVYSFGVVLVELISSKPAVDMNRRGGDVNLANMAMHMIQSYEMEQLVDPQLGYGSDGETRRTVDLVAEVAFRCLQPEQDVRPPIGEVLDALREALRMDKVGYVKDDAGLVKKSRDGSPDCVMYQWISPSTTSNNSS</aaseq>

Gene Sequence

<dnaseqindica>1..790#3161..3193#3291..3551#3640..4556#ATGCATCCTGCTTTGCTACTGCTCCCCCTCGCCTCCTTGCTGCATGCCGCGGCAGCAATTGGCCACAACGAGACCAGCACCAGTGGCAACACAAGCTGCACGCCGGCGAGATGCGGGAACCTGACCATCAGTTACCCCTTCTCGCTCAGCGGCGTGCAGCCGGTGTCCTGCGGCTACCCGGTGTTGGACCTCACCTGCGACAACCGAACCGGCCGCGCGTTCCTCAGCAGGACGTTCAGGGACCACCTGTTTCGCGTGGACAGTATTTTCTACGAGAATAACTCGCTGGTGGCGGCCGTAGAGACCACCTTCGCCGGCGACGCCGACTGCCCCGTCCCGGATTTCAACGTGACATCCAGCCTCAGTCCCTACCCGTTCATCATCAGCAACACCAACAAGTATCTCGCATTCATCTATGACTGCTCGATTCCTGAACACGTTGGGCAGCTGCAACGGCCATGTGGAAACCGGACGATGGGAGCTTACATCTCCGACAAGTGGAACAGCACACCACCGTCCGGGGTTCGAGGGAACTGCAACTCTGTCAGCGTGCCGGTGCGTGGGTACTATGATGGAATGAAGCCGGTGAGTGGACACTACGAGCAATTGATCAAAGATGGGTTCGTCTTGAAATGGATGAGGTCGGTAATGGGAGATCAAGACTGCGATGGGTGCAGAAGGAGAGGCGGGGAGTGCAGGTTCGAACAGCTTTCGTTCCAGTGCTTCTGCCCCGACGGGTTGCTCTGCTCCAATTCAACCCGTACCAACACAACGTCAAGCCATCCATCAGGTAAGGAGCGTTTGCTACCTTTGCAAAAATTTTTTTTGAAGAAATACTTTTGCATTGGCGTGAGAATGAATACATTATGCATATTACACGCATTGAGATACATGTTCCTACTTATCACTTAGGTTGTGCTTTTTGTATGCAAACCTTGAGGGAAAAAGTTCGTATAAGAATTCCAAACAAGCTTAGGAAACTGCGAGTCTGCAAATTTTGTTGGTCATTATTTCTTAGAGCTAAGAGATTGCTGGCTATTCGTTTTTCATAAAGAGTAGAGATAATAGAAATTCAAAGGCTGCTAACATTAAGACGCCGCCTCTGGTCTGAAACTATGAATGGCACTTCCCCTTGACTATAATATAACAATGCAGACTTTCATCATTTGAAATGGTCAATTCGTGTATTTGATTTCTTTTAACTTCCTTTCGTTTTGTTTTTGACTGAAACTTCCCTTGAATTGCTTCGGTTTCATCTTTGATGGCAAACTGTTTCATTGAACCTCTTTCTTTCGTTCTCCTATAGCACCTACTGCACTGTTCAAAACAAACGTTAGCAGTGGAATCAACAAAAAGGCAGAGGGTAGCAGTTAGTCGCTCTATCAAGTTGAGCAGTCAGTTGTGACAGCATATCGTTTTCATATATGTCTGTGCAAACCTTGTGTCAACTGCCAAGTACTACTTCAGTTCATCAAAATGTGCGATGTGTCATGTCATCCACATCGAATTGTAGCATATGCATGCATCTATAAGAGTTACATCTGTCGATAAATGATGCCTTTGATGTTAGGGAATAGAGTAAATTAATCAAGCTGAAAGGGGCTGGCACATGAACTAAGACCCGGCAAGGAACAAATGAAATCCAGGGGAAAGGTGAAAGGGACTAGGACGACCTAGAAGTCTTCTTTGTTTAAAAGAAGAAAATGATGTGTGTTAGTCCTGTAATGTTCATACTATTGTTACTGTGAAACTTTATGCTTTCATTAGTTCGGTTAATCCATATCATAAGATAGATTATGCTAATTATTACCTAACCAATCGTTTGGGGCCCATCTATAATCAATTTTTTAAACCATTAGATCTATCTGCTCACATGCTTACTTCTTTAGCGGTAAAACAAAAATTGTATAGCTCAAAATAAAATGAAAAAGGTCCATTTTACTCCCTATGGATTATTTCGTTGGTTCACTTAACCCCCTAAATTATTTTTTTTTACTCATTTTACACCAGCGGTGGAACTAGGTTCTCAAGCCTGTCGGGGTCAAAATGCATAAATATATAACTATGTGAGGGTCAATCTATACAAATTTTCATTGTTTCATGTACTTTTTCACTATTTTTCATATTATCAATATATATCTTGCAAATACCTGTGGGGTCAGCTGACCCCACAGTTTTAACGTGGCTGTTTTACACCCCGAATTATTGAAAACAGATCACCTTGCTCTCTAATGGTATTTCTCTTCCTTTTTTTTCTCTCCAAATAAATCATATTTTGCAGTGAAATTGGGTAGGATTGATAGATATATCATAACATATCTTCTCTATTATCATTGTATACATATATATTAAGCACTAGGCTTGATTTAAACATCGAGGTTTTAAATTTTAAACATATAGTCATGAATATTTTTAAAGTATTTTTGAAATTTTTATAATGGTGTTATCTATGGCTCTATAAAATTTCAGCTTAAAGTATGACTTGTATAAAGAGAAATGCTATTAAGCAATAAACTGAACCACTTTTAATAGTTTAAGGGGGTAAAATGAGTTAAAAAAATAGTTCTGTGGGTTAAGTGGACCAATGAAATAGTTCGGGGGAGTAGAATGGACCTTTTTCTACGAATTTTAAAGTACAAAACAAGCAAACTCTAATCTAGACGAGCACAGAAAGAAAATATCCAGATAAACTAATACAAGATTATAATTAAAAAACTAAATGTCGCGATAAAGCTTTACTAAAGTGACACTATAAATACAAGCTTTACGTTATGCTTGCATGTTAGGGTGACTGATAAATAAATTTCAGTGAAGCAATAAATAGTCAATATTTTTAGTTAGTGATAAGATACATCATCTGGTTCCCCTCCCAAAAAAAAGAAAGATAGATCATCTGGTTGCTAATCTGTCATTTCTGGTTTCTTCGTCATGGGCAAATTTTATGGTCTGTTTGGTTTGATGTCCACTACCAAAATTTGGGCGGGTAGAGTTGAAAAGGTACAAAATAAAACCAATAATGTCCTATAAGAAACAATTTGTGCAACCTCAAAATATTTTATAAAGTACAAATTTTAGTAGGGCAGCAAACCAAGCTAGCCCCTTTTTTTTTGTTCCCTCTCATAATATGCTAATTTTCTTCCTCTGCACTCTTTACATGCAGGCAAGGTTAATCGAGGAGTCAAGATTGCCGCAGGTAATGCTGATTTCAATTAAACATTTACCAAGATAGGCTAGTATGGTATGTGACATCTCCTGATCTGTTCTTTTGATTAAACCACTGTCACAACCAGGAACCGCAGCGGCTGTTGTATGTCTCGGTATACTTGGCGTTGGCTCCACTGTGTTGTACACCCGGAGGAAGAGGAAAAGATCTGCATCCTTTGAAGGTCTCATCCATGGAGGGACGCCATTGCCATCACTCACGAAAGAATTCAGCCTCGCCGGCTTGGCATATACCCACATCTTCACCTACGAGGAGCTCGACGAGGCTACCGACGGCTTCAGCGACGCCCGGGAGCTCGGCGTCGGCGGCTTCGGCACAGTGTACAAAGGTACAAGATCATACACAAAGCCAGTGTCCCATTGTCCATGTCGGGATTTGATCAGTTGAGAGTAAAACATTGACATGTCTTGTTACAGGGATACTCCGGAATGGGGACACGGTGGCGGTGAAGCGGCTGTACAAGAACAGCTACAAGAGCGTGGAGCAATTCCAGAACGAGGTGGGCATCCTGTCGCGGCTGCGCCACCCAAACCTCGTCACTCTCTTCGGCTGCACGTCGCAGAGCAACAGCCGCGACCTGCTCCTCGTCTACGAGTTCGTCCCCAACGGCACGCTCGCCGACCACCTGCACGGCGCCGCGGCGGCGCGGTCGGCCTCCCTCGACTGGCCGACGCGGCTCGGCATCGCCGTCGAGACGGCCAGCGCGCTGGAGTACCTCCACACGGTGGAGCCGCAGGTGGTGCACCGCGACGTGAAGACGAACAACATCCTCCTCGACGAAGGGTTCCACGTGAAGGTGGCCGACTTCGGCCTCTCCCGGCTGTTCCCGGCGGACGCCACGCACGTCTCCACGGCGCCGCAGGGCACGCCGGGGTACCTCGACCCGATGTACCACCAGTGCTACCAGCTGACGGACAAGAGCGACGTGTACAGCTTCGGCGTGGTGCTCGTCGAGCTCATCTCCTCCAAGCCGGCGGTGGACATGAACCGGCGCGGCGGCGACGTCAACCTGGCCAACATGGCCATGCACATGATCCAGAGCTACGAGATGGAGCAGCTGGTGGACCCGCAGCTCGGGTACGGGTCGGACGGCGAGACGAGGAGGACGGTCGATCTCGTCGCCGAGGTGGCGTTCCGGTGCTTGCAGCCGGAGCAGGACGTGAGGCCGCCGATCGGGGAGGTCTTGGACGCGCTGAGAGAAGCTCTGCGGATGGACAAGGTAGGCTACGTCAAGGACGACGCCGGGCTGGTCAAGAAGAGCCGAGACGGCTCGCCGGACTGCGTCATGTACCAGTGGATTAGCCCATCCACCACTTCCAATAACAGCAGTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002437