BGIOSGA002471

From RiceWiki
Revision as of 10:36, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA002471| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA002471, complete gene.| tag = P0409B0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA002471

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002471, complete gene.

LocusTag

P0409B08.19

Ensembl Transcript ID

BGIOSGA002471-TA

Ensembl Protein ID

BGIOSGA002471-PA

Length

3180

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:1796808..1799987

Sequence Coding Region

1799718..1799987,1797952..1798211),complement(1796808..1797129

Genome Context

<gbrowseImage1> name=IndicaChromosome01:1796808..1799987 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:1796808..1799987 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGACGACCCGGTGCACATCATGTTCAGTTACAGTGGCTGCGGCGATGGTAGTATGATGATGTCGAACCCGAGGGTTCTCGTTGTGGCGGAGAAGGGGGCGGAGGTGGCCATCATTGAGGAGCACTTTGGTCAGGAGGACGGTGGGTGTTATTGGGCTAATCCGGTGATGGAGATCATCGTGGAGGAGGATGCGAAGGTGGTGCATTCCTATGTGCAGCAGCAGTCGTTTGCGGCTGCGCATACCAAGTGGACCGTCGTCCAGCAGAATACATCTAGCAACTATGAGTTTGTTGAGGTAAGCATTGGAGCAAGATTGAACAGGCACAATCTCCACGTCCAGCAGTTGGGCCCTGAGACCAACACACAATTGTCAACGTTCCACTTCTCAGCGCAGAATAAACAGATACATGATCTTCATAGCAAGCTTATACTTGATCACCCAAGAGGTCGTTCACAACAGATACATAGATTGATTGCTTCTGGTACAGGGAATGGCATATTTGATGGAAATATCAAAGTGAACAGATATGCACAACAAACTGACGCAGGGCAAGAAACCAAGTGTCTTCTCCTGTCATCGAAGGCACTTGTTAATGTGAAGCCAAACCTTCAGATCATTGCTGATGATGTCAAATGTACACATGGAGCTGCCATCAGTGGTGAACATGATCCAAATGCGATCTACTTCTTGCAAGCAAGAGGCATCGATGCTAAAACAGCGGCGGATGCCCTAAATTTCGCCTTTGGAGCCCATGTGATAAACCAAATACCATTCAAGCCCATAGAGAAAAAGACATTAGCTCATTTCAAAGCGTTGTTGGCTTCCTCAAGACAAAACGACGAATGA</cdnaseq>

Protein Sequence

<aaseq>MADDPVHIMFSYSGCGDGSMMMSNPRVLVVAEKGAEVAIIEEHFGQEDGGCYWANPVMEIIVEEDAKVVHSYVQQQSFAAAHTKWTVVQQNTSSNYEFVEVSIGARLNRHNLHVQQLGPETNTQLSTFHFSAQNKQIHDLHSKLILDHPRGRSQQIHRLIASGTGNGIFDGNIKVNRYAQQTDAGQETKCLLLSSKALVNVKPNLQIIADDVKCTHGAAISGEHDPNAIYFLQARGIDAKTAADALNFAFGAHVINQIPFKPIEKKTLAHFKALLASSRQNDE</aaseq>

Gene Sequence

<dnaseqindica>1..270#1777..2036#2859..3180#ATGGCCGACGACCCGGTGCACATCATGTTCAGTTACAGTGGCTGCGGCGATGGTAGTATGATGATGTCGAACCCGAGGGTTCTCGTTGTGGCGGAGAAGGGGGCGGAGGTGGCCATCATTGAGGAGCACTTTGGTCAGGAGGACGGTGGGTGTTATTGGGCTAATCCGGTGATGGAGATCATCGTGGAGGAGGATGCGAAGGTGGTGCATTCCTATGTGCAGCAGCAGTCGTTTGCGGCTGCGCATACCAAGTGGACCGTCGTCCAGCAGGTAGACCTTTCTTGTGCATTTTGAATTGCTTTGCATATAGTTATGATTTGTGGATCGATGTCTTAACCATAGTTGTTGTTCACCTTCAATGTGCTTGCTTGTTCTGTGAGTTGAGCTAGGATAGGATAGGATAAAGACAATTTTGGTTCAATTAGGACTGCACATGGTTAGAAACATAGAATTACTAAGTTGATAAGAGTAGCAGTGGCATATGTTACAATTTATATGTTTCAACAATCTTATCTAAAAACAATATTGCAATTAGAGGTAGCTTCCTTCTTGTTTGTGATATTTAGTTTTATTTATGGGGTGTCATGAGATTGTGTTATTCCTTCTTTAGTAGGATGACAGTATAACAGATCAATGAGGAATGCACTACACTTATTTTGTAGCTAGAAGCTTCACATGCAGAAATGAGATTTCTTATTCCTTCTTTAGTAGGGTGACAATATAACAGATCAATGAGGAATGCACTATACTTTCTTTGTAGTTAGAAGCTTCATACGCAGAAATAAACCTCCTAAAGTAAAAGGGTTTCCTAACAAACTGCTGGGAGTGCATTATTACCACTTTGTGCTTTGATGTTTCAATTGAATATTTACAACTGGGACATACTGTGAAATAAATCATCTTTATTTAGAACAACAAGGCACATACAAAATTCCTGTATTAGTTGGATTTAGGCTTTGCTTCATTTTCTATAAAGTTTAGCTTTTCACACCATTTGTCGTCTAAGCTAGCAACCTGTGGAACCAGAAGGCCTGAAAACCATGGTTTCAGAGAAAGTTTCTTACTGTTGGGGCATAAGGTCGTACTGAGTTCCTATTCATTGCTGCTTCAGTGGACTAGGGGAAATGATATCTAAGTGTTCAATCTGAGAAGTGAAAGATAGTGTAATTAACTTAAGAAATCCTAGCTAAGGAGGAACAAGAGGTTCATCCTCAGCGATGCAAAAGTATAACCTCATGACACAAAAATAAAGTGCAGGATGAGAATAATGCGATAGCAAGGAGAGATGGCAGTGACAACTCACCTAAATGTGGTTGGTGGTGGAAACCCCATTAGTAGACCGTGACTTCCATGAAGGTATTAGGCAGTAGAAATCCCTCAAGTTCTCACCTCCTGTGCTTGTCTGTTGGTTTTCTATGGTGGCTGCACTGTGCTAGGAGAGTGTATGTATGGCTATGGGCTAGCGACACTAAGGTTAGTGGCTAGTTGGACTGACTGACCCAATTCGACATCTTTGCATTTTTTTTCCTTTAAATTTCGTTAGACAGCTTATGGTAACTTAGCACTAATAATTTATTTCATAAATTTATTTTTTTATTACACTCTGGAAAGGACTTGTATTGGAATGTTCCATACTGGAATTATCTTGGGACGAAATTGACAAGAATGATTTTACCTATTGTTTTCATTTTTCAATGATGAAGATTAAAGCAAGGCTTACTTGAGTAGGAAATAACAGTAAATTATAGTCTTATAGTTGTCTAACATTCTTTGCAGAATACATCTAGCAACTATGAGTTTGTTGAGGTAAGCATTGGAGCAAGATTGAACAGGCACAATCTCCACGTCCAGCAGTTGGGCCCTGAGACCAACACACAATTGTCAACGTTCCACTTCTCAGCGCAGAATAAACAGATACATGATCTTCATAGCAAGCTTATACTTGATCACCCAAGAGGTCGTTCACAACAGATACATAGATTGATTGCTTCTGGTACAGGGAATGGCATATTTGATGGAAATATCAAAGTGAACAGGTATGTGATCAGATTACTTCTGTGAAGTATTTCAACTGTATTATTTTGACAAAAAGTATTACTGATTTTCAGCCATTTTTGAGCCATCAGTGCATATATGTAGATCTTCAAGTTTTTTTTATTAATTCAATAGTAGATTTTCTAACTGCTTAGGATTTAAATGGTGGTGGAGTACTGACATACTACATACCTGAAGTTTATATTGCTTTAGGATCTTTATTTATTAGTTAAAATGTAGTGAAGCCATCTGTAAATATAGTGTTAGAGACACACTTCCTCAATTCAAGCAACACCAAATTCAATACAAGAGTGGCTCATCCAGCGGAAGGAGTAGCAGTTTTCTACTGCAATAGTGAAGGTTTTTTAGGTGGAAGATGGAAAGGTACAAAGGAGGCTAGAAGCTTCTAGAACAAGGAAATGAAGAGAAGGGGTAGAGGAGTAGATCGACGAGGAGCCAACCGACCTCCAGATCGCCGCCGCCACCGTTTGGCGCCTTGGCCAATCGATCTGTTCGATCCCCAAATGTTGCTAACGCTGCTGCTTTGTATGCTGCTCCTGCTTTGCTTGGGCCTCGCTTGGACATGGCTAACTTGGCCCATATACAGTCCAATCGGGTTCCTAACATATAGTCTTGCATATGTAGCAGAGCAAAGCTGTTCAAATAGCAATTTTTCCTTATGAAATCAGGAGATTGTGCACAATTATTGTTTGTTTCACTTCTGAGCAGCTTCAGTATTCTGTTGATATTCATGAAGTTCTGTTTATGCATCACTATTTCCTCCTGTCCTAGACTCCTAATACATTGATGTCCTTGATTCACAGATATGCACAACAAACTGACGCAGGGCAAGAAACCAAGTGTCTTCTCCTGTCATCGAAGGCACTTGTTAATGTGAAGCCAAACCTTCAGATCATTGCTGATGATGTCAAATGTACACATGGAGCTGCCATCAGTGGTGAACATGATCCAAATGCGATCTACTTCTTGCAAGCAAGAGGCATCGATGCTAAAACAGCGGCGGATGCCCTAAATTTCGCCTTTGGAGCCCATGTGATAAACCAAATACCATTCAAGCCCATAGAGAAAAAGACATTAGCTCATTTCAAAGCGTTGTTGGCTTCCTCAAGACAAAACGACGAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002471