BGIOSGA002479

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Revision as of 10:36, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA002479| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA002479, complete gene.| tag = OsI_002...")
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Gene Name

BGIOSGA002479

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002479, complete gene.

LocusTag

OsI_00200

Ensembl Transcript ID

BGIOSGA002479-TA

Ensembl Protein ID

BGIOSGA002479-PA

Length

4705

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:1658635..1663339

Sequence Coding Region

1663252..1663339,1662021..1663079),complement(1661763..1661901,1661565..1661636),complement(1661373..1661444
,1661200..1661280),complement(1660942..1661099,1660452..1660729),complement(1660222..1660348
,1659231..1659423),complement(1658635..1659136

Genome Context

<gbrowseImage1> name=IndicaChromosome01:1658635..1663339 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:1658635..1663339 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGCGTTCACTGCTGCCGTGGTTGCTTCTTCTTCTCTGCTTCGCCGACGGCGTATTCCAATCTCGTGCACAGCCAGACAGCAAAGGTTTCATTAGCATAGACTGTGGTATCCAGCCGAACACGAGCTACGTGCACAACACGACCAAGATATCCTACGTCGCCGACGACGACTTCACCGACGGCGGCTCCAACTACAACGTTTCGCCGGAGTACATCAAACCGCAGCTCTCGCAGCGGTACTACAACTTGCGTGCCTTCCCCGACGGTGCGCGCAACTGCTACACGGCCCGGTCGCTGGCGCCTGGGATCAAGTACCTCATCCGCGCCTCTTTCTTGTATGGCAACTACGACGGCCTCAACAAGCTGCCGGTGTTTCATCTCTACATTGGCGTCAACTTCTGGACCATGGTGAACATCACGAGCCTCGGCCTCGGCGGCTCTCGTTATGAGGAGGCCATCGTGGTGGTGCCCGATGACTTTGTGCAGGTCTGCCTGATCAACACTGGCACCGGCACGCCCTTCATCTCCTCGCTGGAGCTGAGGCCTCTGGACAAAAGGCTCTATCCGCAGGTGAACGCCACGCTGGGCCTCCTCCAGCTCAACCGCCTCAACTTTGGCCCGACTGATAACAGCCTCGTCAGGTACCCAGATGACCCACATGACAGATTTTGGGGAAACTGGGACAGCTATACATCGAGCTTATGGAAGGAGATATCCACGGCGTCGAGGGTAGATAACTTAGACGGAGACATATTCGATGCGCCGACGGCGGTGATGCAGACGGCAGTGACGCCGCGCAACGCGTCAGGTAACATCTACTTCTTTTGGGAGCCTTGGCCGCAGCCAAACGACCCGACGCCGCCGTACACTGTCATCTTCCACTTCTCCGAGCTGGAGATCCTCACCAACAACGCCTCGCGCCAGTTCTACATCAATCTCAACGGCGAACCGTTGATCGATACTGCTTACGAGCCGACATACCTTACAGCGAGATACTTATATGGCTTGGAGCCCCTTGAAAGAACCTCCAGGTACAATATCACCATCAACGCTACCGCCAACTCGACGCTGCCGCCGCTCATCAACGCCGCCGAGATTTTCTCGATCATCTCCACCGCAGTCATCGGCACGGACTCGCAGGATGCATCTTCCATGATGGCGATCAAGGACAAGTACCAAGTCAAGAAGAATTGGATGGGTGACCCGTGTATGCCAAAGACATTTGCGTGGGACAAGCTGACCTGCAGCTATCCCAATTCGAGCGGTGCAAGAATCATAAGCTTAAATCTGTCCTCCAGTGGTTTGAGTGCTGACATATCATCCGCTTTTGGGAATCTCAAGGCTCTTCAATACTTGGATCTATCAAACAACAGTTTGACCGGCTCAATTCCGGATGTCCTCTCACAATTACCTTCCTTGAGAGTTTTAGATCTGACAGGAAATCAACTCAGTGGATCAATTCCATCTGGAATTCTCAAGAGGATTCAAGATGGCTCCTTAAATGTAAGATATGGAAATAATCCAAACCTATGCATCAACGGCAATTCATGCAAGGCAGCTAAAAAGAAGAGCAAGCTAGCCATCTACACAGTTATTCCTGCAGTTCTGGTTGTATTGATAGCATCAGTTACAACACTCTTTTGCCTGCTGAGACGAAAAAAGCAAGGACCAATGAACAATTCTCTAGAGCAGCAAAACGAGATGTCGACATCAACAAGCCACGTGCTGATAAATAGTGGATATGGTGACAATGTATCGCTGCGGCTTGAGAACCGTCGGTTTACATATAAAGAACTAGAGAAGATAACCAACAAATTCAAACGAGTGCTCGGACGGGGAGGGTTCGGATATGTCTACCATGGCTTCTTGGAGGATGGCACAGAAGTGGCGGTCAAGTTGCGATCTGAATCCTCAAGCCAAGGTGCTAAGGAGTTCCTCATAGAGGCTCAAATTTTGACCCGGATTCACCATAAGAATCTTGTATCTATGATCAGTTACTGCAAGGATGGGATATACATGGCTCTTGTCTACGAGTACATGCCAGAAGGAACCCTAGAAGAACATATTGTAGGGCTAGAGTACCTACATAAAGGGTGCAATCCGCCTATTATTCACAGGGATGTGAAGGCGACCAACATCCTACTAAACACAAGGTTGGAGGCAAAGATTGCCGATTTTGGCTTGTCCAAGGCATCCAGCTATGACAACATCACCCATGTATCCACGAACGCTCTCGTTGGCACACTTGGATATGTCGATCCAGAGTACCAGATGACAATGCAAGCAACAACAAAGAGCGATGTCTATAGCTTTGGCGTCGTCTTATTGGAGCTGGTCACTGGGAAGCCGGCTATCTTGCATGAACCAAACCCCATCAGCGTCATCCACTGGACACGACAACGTCTAGCACGGGGTAACATCGAGGATGTTGTGGACACATGCATGCCTAGTGATTATGATGTAAATGGTGTGTGGAAGGCTATGGACATTGCGTTCACGTGCACTGCACAAGCATCGACACAACGACTCACTATGACTGAAGTGGTGATGCAGTTGCAAGAGTGTCTCGAGCTTGAGGATGCACGTTGTGCTATTGGCGATGCACACAACGAGTTCTACCCTGACCCTCGGAGCGACCACAATTTAAGTTATAACACGTATGTCTCGGACCGGTCCAACGATGTGAGTCAAAATAGTGGCGTGTCTATGATGGAGCATAATTTTGGGAGGGTGCCTACAATGGCCTCCGGTCCTGCTGCACGATAA</cdnaseq>

Protein Sequence

<aaseq>MERSLLPWLLLLLCFADGVFQSRAQPDSKGFISIDCGIQPNTSYVHNTTKISYVADDDFTDGGSNYNVSPEYIKPQLSQRYYNLRAFPDGARNCYTARSLAPGIKYLIRASFLYGNYDGLNKLPVFHLYIGVNFWTMVNITSLGLGGSRYEEAIVVVPDDFVQVCLINTGTGTPFISSLELRPLDKRLYPQVNATLGLLQLNRLNFGPTDNSLVRYPDDPHDRFWGNWDSYTSSLWKEISTASRVDNLDGDIFDAPTAVMQTAVTPRNASGNIYFFWEPWPQPNDPTPPYTVIFHFSELEILTNNASRQFYINLNGEPLIDTAYEPTYLTARYLYGLEPLERTSRYNITINATANSTLPPLINAAEIFSIISTAVIGTDSQDASSMMAIKDKYQVKKNWMGDPCMPKTFAWDKLTCSYPNSSGARIISLNLSSSGLSADISSAFGNLKALQYLDLSNNSLTGSIPDVLSQLPSLRVLDLTGNQLSGSIPSGILKRIQDGSLNVRYGNNPNLCINGNSCKAAKKKSKLAIYTVIPAVLVVLIASVTTLFCLLRRKKQGPMNNSLEQQNEMSTSTSHVLINSGYGDNVSLRLENRRFTYKELEKITNKFKRVLGRGGFGYVYHGFLEDGTEVAVKLRSESSSQGAKEFLIEAQILTRIHHKNLVSMISYCKDGIYMALVYEYMPEGTLEEHIVGLEYLHKGCNPPIIHRDVKATNILLNTRLEAKIADFGLSKASSYDNITHVSTNALVGTLGYVDPEYQMTMQATTKSDVYSFGVVLLELVTGKPAILHEPNPISVIHWTRQRLARGNIEDVVDTCMPSDYDVNGVWKAMDIAFTCTAQASTQRLTMTEVVMQLQECLELEDARCAIGDAHNEFYPDPRSDHNLSYNTYVSDRSNDVSQNSGVSMMEHNFGRVPTMASGPAAR</aaseq>

Gene Sequence

<dnaseqindica>1..88#261..1319#1439..1577#1704..1775#1896..1967#2060..2140#2241..2398#2611..2888#2992..3118#3917..4109#4204..4705#ATGGAGCGTTCACTGCTGCCGTGGTTGCTTCTTCTTCTCTGCTTCGCCGACGGCGTATTCCAATCTCGTGCACAGCCAGACAGCAAAGGTACAACTAATAGTATCATCATCAGGATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATGCATGCACGTAGGTGCTCGATTGGGCCTTTTGCCCTTAATGAATTTTGCATGCTGCAGGTTTCATTAGCATAGACTGTGGTATCCAGCCGAACACGAGCTACGTGCACAACACGACCAAGATATCCTACGTCGCCGACGACGACTTCACCGACGGCGGCTCCAACTACAACGTTTCGCCGGAGTACATCAAACCGCAGCTCTCGCAGCGGTACTACAACTTGCGTGCCTTCCCCGACGGTGCGCGCAACTGCTACACGGCCCGGTCGCTGGCGCCTGGGATCAAGTACCTCATCCGCGCCTCTTTCTTGTATGGCAACTACGACGGCCTCAACAAGCTGCCGGTGTTTCATCTCTACATTGGCGTCAACTTCTGGACCATGGTGAACATCACGAGCCTCGGCCTCGGCGGCTCTCGTTATGAGGAGGCCATCGTGGTGGTGCCCGATGACTTTGTGCAGGTCTGCCTGATCAACACTGGCACCGGCACGCCCTTCATCTCCTCGCTGGAGCTGAGGCCTCTGGACAAAAGGCTCTATCCGCAGGTGAACGCCACGCTGGGCCTCCTCCAGCTCAACCGCCTCAACTTTGGCCCGACTGATAACAGCCTCGTCAGGTACCCAGATGACCCACATGACAGATTTTGGGGAAACTGGGACAGCTATACATCGAGCTTATGGAAGGAGATATCCACGGCGTCGAGGGTAGATAACTTAGACGGAGACATATTCGATGCGCCGACGGCGGTGATGCAGACGGCAGTGACGCCGCGCAACGCGTCAGGTAACATCTACTTCTTTTGGGAGCCTTGGCCGCAGCCAAACGACCCGACGCCGCCGTACACTGTCATCTTCCACTTCTCCGAGCTGGAGATCCTCACCAACAACGCCTCGCGCCAGTTCTACATCAATCTCAACGGCGAACCGTTGATCGATACTGCTTACGAGCCGACATACCTTACAGCGAGATACTTATATGGCTTGGAGCCCCTTGAAAGAACCTCCAGGTACAATATCACCATCAACGCTACCGCCAACTCGACGCTGCCGCCGCTCATCAACGCCGCCGAGATTTTCTCGATCATCTCCACCGCAGTCATCGGCACGGACTCGCAGGATGGTAAGTTTATGCACACACATGCATGTAATTAGCACTTGTACATACATACATGATCAAGCTGATGATATATATGCTCAAGCACATCGTGTCTCTTGGTATTGTTGAAAATCTGTGTGCAGCATCTTCCATGATGGCGATCAAGGACAAGTACCAAGTCAAGAAGAATTGGATGGGTGACCCGTGTATGCCAAAGACATTTGCGTGGGACAAGCTGACCTGCAGCTATCCCAATTCGAGCGGTGCAAGAATCATAAGCTTGTAAGTAATTCAGTCCATGTATTTGCTGAATACGAACTTAATTGTCCTCATGAAAAACAGGGTAGTTAACTATATATTTAACGAACTAAACTGTATCGGCCGATCATATATATTCTCCTTTTGCAGAAATCTGTCCTCCAGTGGTTTGAGTGCTGACATATCATCCGCTTTTGGGAATCTCAAGGCTCTTCAATACTTGTACGTTCTGAGCTCAGCATGTTAACATTTTTTTTATGCTTATTTGTGATATTTTATTGTTATATTTGGAATAACCTGTTCCATATCTTGTTTTTATGCTTCTTGATCCACATCTTGCAGGGATCTATCAAACAACAGTTTGACCGGCTCAATTCCGGATGTCCTCTCACAATTACCTTCCTTGAGAGTTTTGTAAGTTTGGCAATGCAACTTTTGTCAAATTATATTATATATACCTGCTTGCATCATTTTTAACTGAAATACACATTATATGGTTTCGTCAGAGATCTGACAGGAAATCAACTCAGTGGATCAATTCCATCTGGAATTCTCAAGAGGATTCAAGATGGCTCCTTAAATGTAAGGTAAGTGCATATTACATTCTCTTACCAAACTTAATTTCTTCAGCAAACACTAGGCCAAACTTTTTGCCATTTTGACTAAACACGTTCATGCCATTGGTAGATATGGAAATAATCCAAACCTATGCATCAACGGCAATTCATGCAAGGCAGCTAAAAAGAAGAGCAAGCTAGCCATCTACACAGTTATTCCTGCAGTTCTGGTTGTATTGATAGCATCAGTTACAACACTCTTTTGCCTGCTGAGACGAAAAAAGCAAGGTGAGTGTTTGCCATGGTATATACAACTCCGTCCATTCCATATTGTAAGTCATTTTAATTTTGTCCTACGTCAAAGTTCTTTAACTCTAACACGGTTATATAATAAACTTAGAACAACTTATAATATGGAAAGGAGGGAGTAGCAATTGTCTATTCGACTTCATCCTTGAACACCACTAATGCTACAATAATTCTATTTTTCGCATATGAAGGACCAATGAACAATTCTCTAGAGCAGCAAAACGAGATGTCGACATCAACAAGCCACGTGCTGATAAATAGTGGATATGGTGACAATGTATCGCTGCGGCTTGAGAACCGTCGGTTTACATATAAAGAACTAGAGAAGATAACCAACAAATTCAAACGAGTGCTCGGACGGGGAGGGTTCGGATATGTCTACCATGGCTTCTTGGAGGATGGCACAGAAGTGGCGGTCAAGTTGCGATCTGAATCCTCAAGCCAAGGTGCTAAGGAGTTCCTCATAGAGGTAGAATCTTTTCACTATATTAATGATCTTGCTACATATATGGAAATCCTACTACGGAAAAAAAATCCCACTAGAGAATAATTAAGTTCATTTGCATGCTTAGGCTCAAATTTTGACCCGGATTCACCATAAGAATCTTGTATCTATGATCAGTTACTGCAAGGATGGGATATACATGGCTCTTGTCTACGAGTACATGCCAGAAGGAACCCTAGAAGAACATATTGTAGGTATGCATGTATACTATCTATGACTGGCCAACAGGGAATACTCTGATACTTCATAAAGTGGATCATTTCAATCATAAGCCTCTCATGATCTCCAATTCTCATTTTATTTACCCATTTGCAGGGGAAAACAAAAAAGGGAAAATACTTAACATGGAGAGAGAGGCTCAATATCGCATTGGAATCTGCACAAGGTAACTACTTGAATTACTAAGTTGTTCTTAGAGGTTGGGTCTATTTACCTTAGAGAAAGTACAATATGAGTGGGATGCTAGGTGAATAGCTAGGCCGACGCATGTTTGGATGATGAGACGAAGGAAAGAAGGAGAGGAAAAGAGAATGAGCTACTGTTCATTCAAGAGGTGGCATCGAGACAAGCTCTAAGAGAAGGGGAAACACGGAGAAAGAGAAGATTGAGAACAAATGAATTCAAAGAAATTATTTTGTAGTATTTGGCTTAGTGTACTGAACTAATGTATTATACGTTATCTTTTAACTGATGAGTAGATGATGTGGACAAAATTAGAGGTATCAATCACCTGCATTGTTATAAATAGAGTTCATCTATTATTTTCAATCAATGGACCAAATTCTACTATACTACATACAATATAGGAAGTAAAAATGTGTAGGGCAAAATTGGAAGTAGATCAATAATATCGTTTTTTAGGTGTATAATTCTCACTATACCAATGGATCCATATGCACTGCAACAAACCCTTTTAGGTAGAATGTACTGTAATTTTACAATTTTATTTTCCAAAGCTTGATCGCTTATGTTAATATTTGGTTAATGACCAGGGCTAGAGTACCTACATAAAGGGTGCAATCCGCCTATTATTCACAGGGATGTGAAGGCGACCAACATCCTACTAAACACAAGGTTGGAGGCAAAGATTGCCGATTTTGGCTTGTCCAAGGCATCCAGCTATGACAACATCACCCATGTATCCACGAACGCTCTCGTTGGCACACTTGGATATGTCGATCCAGAGTACGACAAGCCCATTTATATTTATCAAAGTTGTTGTTTATTGTTTTCAGTGACAAATGCTAAATAAGGCTGATTGATCGGGCTAAACATGCAGGTACCAGATGACAATGCAAGCAACAACAAAGAGCGATGTCTATAGCTTTGGCGTCGTCTTATTGGAGCTGGTCACTGGGAAGCCGGCTATCTTGCATGAACCAAACCCCATCAGCGTCATCCACTGGACACGACAACGTCTAGCACGGGGTAACATCGAGGATGTTGTGGACACATGCATGCCTAGTGATTATGATGTAAATGGTGTGTGGAAGGCTATGGACATTGCGTTCACGTGCACTGCACAAGCATCGACACAACGACTCACTATGACTGAAGTGGTGATGCAGTTGCAAGAGTGTCTCGAGCTTGAGGATGCACGTTGTGCTATTGGCGATGCACACAACGAGTTCTACCCTGACCCTCGGAGCGACCACAATTTAAGTTATAACACGTATGTCTCGGACCGGTCCAACGATGTGAGTCAAAATAGTGGCGTGTCTATGATGGAGCATAATTTTGGGAGGGTGCCTACAATGGCCTCCGGTCCTGCTGCACGATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002479

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA002479&oldid=40203"