BGIOSGA002489

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Revision as of 10:37, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA002489| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA002489, complete gene.| tag = P0445D1...")
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Gene Name

BGIOSGA002489

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002489, complete gene.

LocusTag

P0445D12.4

Ensembl Transcript ID

BGIOSGA002489-TA

Ensembl Protein ID

BGIOSGA002489-PA

Length

5299

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:1495419..1500717

Sequence Coding Region

1500502..1500717,1499819..1500009),complement(1499576..1499726,1499114..1499246),complement(1498222..1498423
,1497553..1497829),complement(1496846..1496977,1496449..1496669),complement(1496098..1496310
,1495913..1495997),complement(1495419..1495604

Genome Context

<gbrowseImage1> name=IndicaChromosome01:1495419..1500717 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:1495419..1500717 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGTCAGGGGTCTGGGCCAGCTCCTGGCCGCGCTCGCCGCGGCGCTGTTCGTCCGCGCCGTCGCCGGCCCGGGCCCGGCGCTCCTCCCTCCGGCCGACGACGAGGACTCCGACGCCGACCCGGAGGCCGGCGGGGAAGGAGGCGGCGTGCCTCCGGTGACGATAAGGTGGGCCCGCATCACCTGCGCCCTCAAGAACAAGCGCGGCGACGTGGCGAGGTTTTTGCTGTCAAATGCGTCTGGGGAGGCGAAATCGGGGAGGCTGCTTGCGCTCATGGGGCCATCAGGGTCCGGTAAAACGACTCTGCTCAATGTGCTTGCTGGTCAGCTCACAGCATCACCTTCTTTGCACCTTTCTGGGTTTCTGTACATCAATGGCCGACCTATCTCAGAAGGTGGCTATAAGATTGCTTACGTGAGGCAAGAGGACCTTTTCTTCTCACAGCTTACTGTTCGTGAAACGCTCTCGCTTGCTGCTGAACTTCAGCTTCGCCGCACGTTGACTCCTGAGAGGAAGGAAAGCTATGTTAATGACCTTTTGTTTCGTCTTGGGCTGGTTAACTGTGCTGACTCAATTGTGGGTGATGCAAAAGTACGTGGAATAAGTGGGGGTGAAAAGAAGCGTCTCTCCCTTGCGTGTGAACTGATTGCTAGCCCTTCTATCATCTTTGCAGACGAACCAACTACTGGTCTTGATGCGTTCCAGGCAGAGAAGGTCATGGAAACTCTTAGACAGCTTGCAGAAGATGGACACACGGTGATATGTTCTATACATCAGCCAAGAGGTTCAGTTTATGGCAAATTTGATGATATTGTACTACTGTCAGAGGGAGAAGTTATATACATGGGGCCAGCAAAAGAGGAACCGTTATTGTACTTTGCATCATTGGGGTATCATTGTCCAGATCATGTGAACCCTGCTGAGTTCTTGGCTGATCTCATTTCTGTTGATTATAGTTCTGCTGAAAGTGTGCAGTCATCACGGAAAAGGATTGAAAACCTCATTGAAGAATTTTCTAATAAAGTTGCAATTACTGAAAGCAACAGTTCGCTGACAAATCCAGAAGGCTCTGAATTTTCTCCCAAACTTATTCAGAAGTCCACCACCAAGCATAGACGTGGGTGGTGGAGACAATTCCGTTTGCTGTTTAAGAGAGCATGGATGCAGGCTTTCCGTGATGGACCAACAAACAAAGTGAGAGCAAGAATGTCCGTTGCTTCAGCAATCATATTTGGATCTGTGTTCTGGCGAATGGGGAAAACTCAGACTTCCATACAAGACAGGATGGGACTTCTTCAGGTAACTGCTATAAACACAGCAATGGCTGCACTGACAAAGACAGTAGGAGTTTTCCCGAAAGAGCGGGCTATAGTTGACAGAGAACGGGCCAAAGGTTCCTATGCACTAGGACCATACCTTTCTTCTAAGTTGTTGGCTGAAATTCCTATTGGGGCTGCATTCCCATTGATATTTGGATCCATTCTTTATCCAATGTCTAAACTTCATCCTACATTTTCTAGATTTGCCAAGTTCTGTGGCATCGTGACTGTTGAATCATTTGCTGCATCAGCCATGGGCCTTACTGTTGGAGCTATGGCTCCTACAACAGAAGCCGCCATGGCCCTTGGACCATCCCTTATGACAGTTTTCATTGTATTTGGAGGATACTATGTTAACCCTGATAATACCCCCGTCATTTTTCGCTGGATCCCAAAAGTATCCCTAATTAGATGGGCCTTCCAAGGGCTTTGCATTAATGAGTTCAAAGGTTTGCAATTTGAGCAACAGCATTCCTATGACATTCAAACTGGTGAACAGGCCCTGGAGAGGTTTTCATTAGGAGGAATCCGCATTGCAGACACGCTTGTGGCACAGGGTAGAATTCTGATGTTCTGGTACTGGTTAACCTACCTTCTTCTGAAGAAAAACAGGCCAAAGTATCAGCAGCTTCTACCACCATCTGAGGAAGATCAAAATAAGCAGCAAGTTAAGGAAGTGAAATGA</cdnaseq>

Protein Sequence

<aaseq>MEVRGLGQLLAALAAALFVRAVAGPGPALLPPADDEDSDADPEAGGEGGGVPPVTIRWARITCALKNKRGDVARFLLSNASGEAKSGRLLALMGPSGSGKTTLLNVLAGQLTASPSLHLSGFLYINGRPISEGGYKIAYVRQEDLFFSQLTVRETLSLAAELQLRRTLTPERKESYVNDLLFRLGLVNCADSIVGDAKVRGISGGEKKRLSLACELIASPSIIFADEPTTGLDAFQAEKVMETLRQLAEDGHTVICSIHQPRGSVYGKFDDIVLLSEGEVIYMGPAKEEPLLYFASLGYHCPDHVNPAEFLADLISVDYSSAESVQSSRKRIENLIEEFSNKVAITESNSSLTNPEGSEFSPKLIQKSTTKHRRGWWRQFRLLFKRAWMQAFRDGPTNKVRARMSVASAIIFGSVFWRMGKTQTSIQDRMGLLQVTAINTAMAALTKTVGVFPKERAIVDRERAKGSYALGPYLSSKLLAEIPIGAAFPLIFGSILYPMSKLHPTFSRFAKFCGIVTVESFAASAMGLTVGAMAPTTEAAMALGPSLMTVFIVFGGYYVNPDNTPVIFRWIPKVSLIRWAFQGLCINEFKGLQFEQQHSYDIQTGEQALERFSLGGIRIADTLVAQGRILMFWYWLTYLLLKKNRPKYQQLLPPSEEDQNKQQVKEVK</aaseq>

Gene Sequence

<dnaseqindica>1..216#709..899#992..1142#1472..1604#2295..2496#2889..3165#3741..3872#4049..4269#4408..4620#4721..4805#5114..5299#ATGGAGGTCAGGGGTCTGGGCCAGCTCCTGGCCGCGCTCGCCGCGGCGCTGTTCGTCCGCGCCGTCGCCGGCCCGGGCCCGGCGCTCCTCCCTCCGGCCGACGACGAGGACTCCGACGCCGACCCGGAGGCCGGCGGGGAAGGAGGCGGCGTGCCTCCGGTGACGATAAGGTGGGCCCGCATCACCTGCGCCCTCAAGAACAAGCGCGGCGACGTGGTGAGTCGCTCTGCCTCGAATCATCCATTCCGTTCCCTCTCGCCGGAGGAGTCGCATTGGTCGGCGGCGCTGCGCGCACGGAAAGAAAAAAAAAATCATCTGCTTAGGATTAGCCAGGAGAGCCGCGTGCTGTCTGAGAGACTGACACTGGGCCCTACCTGTCGATGTGGCACTGACTCATCACATTTTAGATGAACAGGTTGCTGAAATTTGTTTCGCACTTCCGCTGTTGGCTAACGGGCTAAGTAATTGCGTGGCATTCTGCAGTCTGTATGTAGAATTGTATATTAATTTGCGTCGAACAAGTAATTTGCGAAATTTGTTTCACACTTTCACCGTCTGCACTCTGCAGCTTCAATCAGTAGATGAACACACCGAAGCTGTGTATTCTGTATGTAGAATTGTACATTGAGTGCCATCAATAATCGGAATTTCTTGCTTCTGCGCGTCTCTGGGTGATTGTTGTAATGGTTATAACGTGCTGCATGCCAGGCGAGGTTTTTGCTGTCAAATGCGTCTGGGGAGGCGAAATCGGGGAGGCTGCTTGCGCTCATGGGGCCATCAGGGTCCGGTAAAACGACTCTGCTCAATGTGCTTGCTGGTCAGCTCACAGCATCACCTTCTTTGCACCTTTCTGGGTTTCTGTACATCAATGGCCGACCTATCTCAGAAGGTGGCTATAAGTAAGCTTAAGCTATGCTTCTTCAGTTGGCTTTCACAATTTTTTAGTCAGGTTTACAGAGAAGAGCTATACTCATTGCTTTTCCTTGTGTAGGATTGCTTACGTGAGGCAAGAGGACCTTTTCTTCTCACAGCTTACTGTTCGTGAAACGCTCTCGCTTGCTGCTGAACTTCAGCTTCGCCGCACGTTGACTCCTGAGAGGAAGGAAAGCTATGTTAATGACCTTTTGTTTCGTCTTGGGCTGGTAAGTTATCCATGATGGTATATGGTCTGCTTTCTAAAGAAAAAGTTATCCATGATGGTTAAAATGTTCGAAGAAATTGAACCAATTGGTTTTAGTGCACTACATCAAATGTTGGATACGAACTTGTAGTTTCTAGCACTGGTGGAGAAAATCTGTCAAATTACACATGAAAAGCATTGTTATTTTGGTGCTCAGATAGATGACAAGTATGCTAAGTTTTTCAATTGATGGGCAGAACCTACATAATATCTATCGCTGTCTGTTCAAGTATTTCCCTTTTTATTTTGTATCACCAGGTATTTATTTCTTTTTATTATAACTGGTTGTAGGTTAACTGTGCTGACTCAATTGTGGGTGATGCAAAAGTACGTGGAATAAGTGGGGGTGAAAAGAAGCGTCTCTCCCTTGCGTGTGAACTGATTGCTAGCCCTTCTATCATCTTTGCAGACGAACCAACTACTGGTACTTTTACCTGACTGTAGTGTTTATTTAACCCTTCCTTGGTTGAATAAGCATTCTCATCTCCTCTTAATGTTTTCGTTAGGAAATACATGACTAGTTGCAAGCAAATGTTCTGATCACTTCTTCAAATCTACTGTTTCTTTGTAAATTTGTGCCATGCTTCTTTTTTTTATTGGAACCAGCACGAGAATGTGCTTTTTCATTAAATATAGCAGGAGAAAAATACAGCCCCTAAGGGCAAAGAAAAAGAAAATTTGTAGCCATGCCGGATTCAAGTGAAAATAGATTGCCAATACTGCGATAGTTGCATTAAAATGGCTTCAATAGATACACCACATTTTTCTCATGCCACAAGAATTGCTTTAAGATGATGCATGTTTCTTGTACTAAGACTGCTACTCTAATGGTTAACACATGACATATCATAATCTTGGTGGCATCTTTAATCAAGCACCATGGTATTGGGACTTGCCTTATTAGATTTGTCATTGAATGCTGCAAACAAAATATATTCTTGATATGATATACAAGCTACATCCCTTCTGGACAAAGTGTTGCACATTTACTTTATCTGAAGTGTTGAGCTTCCATGATTAGAGATAGCGCATTCATTGGTCCTTTGATGTGACAAAAGTGCAAAACATAAGTGAGATTGCATAAACTTTGTTCACATATGTGCCATCCTTTTAGGTCTTGATGCGTTCCAGGCAGAGAAGGTCATGGAAACTCTTAGACAGCTTGCAGAAGATGGACACACGGTGATATGTTCTATACATCAGCCAAGAGGTTCAGTTTATGGCAAATTTGATGATATTGTACTACTGTCAGAGGGAGAAGTTATATACATGGGGCCAGCAAAAGAGGAACCGTTATTGTACTTTGCATCATTGGGGTTGGTATTCGCTCACCTTTTCCTTTACTTGGCATTTCCTGTTGTTTTCGATGTGTGCATTGTACTGATTTTATTTAGACTGTAATACTCTACTACCTTGGTGCATAACATGATAGTGGTCATATTTGTCCTTGTTAGTGGCACTATCCAAAATTCCAGTGTACGGTATGCTAGAATTTTACTCAGAATTTTAATTAGGCATGCAGATTCTGGCTTGTGTACTTGTTCACACCATAATGGAGATTATCTTGCTTTTATAAGTTCTTTTATCTATTATCAGATGTGTTGGTTTCTATATTCTATGTATACTGTCAATATGCTATGCTGCTTGTTTTTCTGCCTGCTATTATTGCTTATCAATAACTTGAGTTTGATTACTTCATATTTTTCAGGTATCATTGTCCAGATCATGTGAACCCTGCTGAGTTCTTGGCTGATCTCATTTCTGTTGATTATAGTTCTGCTGAAAGTGTGCAGTCATCACGGAAAAGGATTGAAAACCTCATTGAAGAATTTTCTAATAAAGTTGCAATTACTGAAAGCAACAGTTCGCTGACAAATCCAGAAGGCTCTGAATTTTCTCCCAAACTTATTCAGAAGTCCACCACCAAGCATAGACGTGGGTGGTGGAGACAATTCCGTTTGCTGTTTAAGAGAGCATGGATGCAGGTTTTATTAAAATTCATTTAATTCTCAGTTGCAGCTTCCTCTTTTAATCTGCTTCCCGCTGCTTCTTTAAATCAAGTTGATATGTTTATTTATTATTTGCTGTGGAAGTTATCAGATACTCGTGAGGCTTCCTTTCAAAAAAATCGTTTTTCTTACATATTCTTTTAGCCTGAGTAAACTATATACATAATGTAATGAATTTAGGAGGTTTAGATCGAACATGTTACTATATTTGAGTTTGGATCCATGATTTAGTTTTTGCCAAATCTGTGCCTCAAAAAGGTGTAATACGCAACTGCCCATGAAACATACTTGTAAACAAAAAAGAAACACTTTGCTAATGGAACTATGAGGATTTGGATTGTGGTTGATTGTAAACAAAAAGGAAACACTTTGCTAATGGAACTATAAGGATTTGGATTGTGGTTGAGGTTATCTGACTAATGTTCAAGCCTTTTATAGTTTGCCTGGGTACCCATTAATAATCTGAGCGCAGTTGCTTAGATGGGGTTTAGCTAAAGATTTACTGCCACGCTGTTGTGTCTGATATTGGAATAGGACCTTCTGTGTTTTAGGCTTTCCGTGATGGACCAACAAACAAAGTGAGAGCAAGAATGTCCGTTGCTTCAGCAATCATATTTGGATCTGTGTTCTGGCGAATGGGGAAAACTCAGACTTCCATACAAGACAGGATGGGACTTCTTCAGGTAGAATATGTTGGATTTTTTATGACTCGTTGAGTTGAATTTGCTAGGTTGCACATGCTTCAGATTTTGGACTTACATTCATTCTCTTCCTAATATTGACTTTGGTACAAGCTTTTTCATTGTGTCTGAGCATTTTTCTGATTTTGATCTGTCCCTTTTTCAATTTATGAGTTAAGGTAACTGCTATAAACACAGCAATGGCTGCACTGACAAAGACAGTAGGAGTTTTCCCGAAAGAGCGGGCTATAGTTGACAGAGAACGGGCCAAAGGTTCCTATGCACTAGGACCATACCTTTCTTCTAAGTTGTTGGCTGAAATTCCTATTGGGGCTGCATTCCCATTGATATTTGGATCCATTCTTTATCCAATGTCTAAACTTCATCCTACATTTTCTAGGTAAGTATTATCCTCCCTCTAATTTAGAAATGAATCTGAGGCACTTTATTACATGCCACGCAGAAATAGTAGAATATCGATAGTTCGATACTATTTTGTTTATGCTCCATCAAACAACATTCCATGCTACACTTTCAGATTTGCCAAGTTCTGTGGCATCGTGACTGTTGAATCATTTGCTGCATCAGCCATGGGCCTTACTGTTGGAGCTATGGCTCCTACAACAGAAGCCGCCATGGCCCTTGGACCATCCCTTATGACAGTTTTCATTGTATTTGGAGGATACTATGTTAACCCTGATAATACCCCCGTCATTTTTCGCTGGATCCCAAAAGTATCCCTAATTAGATGGTAACCCTCTTCCTTATATCATATTTTGGCTCCTAAGCTAGGTGGGACCGTGGGATAGTTAATGACCCTATATTTCAACTTTGTTTGCCATTGATTTCAGGGCCTTCCAAGGGCTTTGCATTAATGAGTTCAAAGGTTTGCAATTTGAGCAACAGCATTCCTATGACATTCAAACTGGTGAACAGGTACGGTTGTTCATGTGGACCTGCAAAAGGCAGTTTTACATTTTTACTGTTACAAAAATGCAGACACACACTTGGTTAAGTGCCAGTGAGATATTGCTCGACCTAAGTTAATGTTTGAATGATAATGCACTCAAACAGAAAATTGGCCCAGACACTATTCATGTGTTATCATCACATTCAATTAAAAATCTGAATTGAAAATTTTCCTTGAATTGTAACTGGGGCCTGGGTAAAAAGGTGAACCTTTGGCATATCTTTCTTCTATGGAGGGGAAGTGATCTGCTTTTGACACATTACTTCTATGGCAGGCCCTGGAGAGGTTTTCATTAGGAGGAATCCGCATTGCAGACACGCTTGTGGCACAGGGTAGAATTCTGATGTTCTGGTACTGGTTAACCTACCTTCTTCTGAAGAAAAACAGGCCAAAGTATCAGCAGCTTCTACCACCATCTGAGGAAGATCAAAATAAGCAGCAAGTTAAGGAAGTGAAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002489

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA002489&oldid=40213"