BGIOSGA002507

From RiceWiki
Revision as of 10:37, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA002507| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA002507, complete gene.| tag = OS01G01...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA002507

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002507, complete gene.

LocusTag

OS01G0118400

Ensembl Transcript ID

BGIOSGA002507-TA

Ensembl Protein ID

BGIOSGA002507-PA

Length

2328

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:1129700..1132027

Sequence Coding Region

1131880..1132027,1131560..1131730),complement(1131363..1131473,1131000..1131086),complement(1129700..1130871

Genome Context

<gbrowseImage1> name=IndicaChromosome01:1129700..1132027 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:1129700..1132027 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAAGCCGGGGGGGAGCAGCGGGCGGCTGCACGCCCTGCGGTTCGAGTCGCAGAGGTTCAGGCTGCTGACCATCGTCGTCGGCTGCTTCCTCATCTCCCTCACCTTCCTCCTCTCCTCCCGCCCCGACGCCACCGTCTTCTCCACCCTGAGCCCCAGGGAGTCGTTGGAAGACGCACGCATGCCGGCGATGAAGATGCTGCACCGATCATCGTCCGGCGGCCTCACCCGGGATTTCCATGTCGACATCCTGCCGCAGCAGGGAGAGAGACATGCTCATATGCAGCAGAGCGTCGATCAAACCGCTGAAAAGACAGAATGGGTGAAAGACACGGTGATAATCCAGGAGGTCGCCGGCGAGAGATCGGAAGAGGCGGAGGAGGCGGCGGAGCGTGTCGCGGCAGATTCCGGCGACGAGGCTGCACCTGCAGTGGAGGAGAAGAATCAGCAGCAGCTTCCGGTGAAGCTGCAGGACGCCGGCGAGCCAGCTCGCACGCCGGAGCAAACGGTGACGTCACATTCCGTGGACCGGCGGCCGCTCTGCGACTTCTCCGACTTCCGCACCGACATCTGCGACTTCTCCGGCGACGTCCGCATGGCGGCCAACACGTCGGAGTTCGTCGTCGTCGTCGACCCGGCGGCGGCGGCGGTGTCGCACAAGGTGCGGCCGTACCCGCGGAAGGGCGACGCGACGTGCATGGGGCGCGTCACGGAGATCACCGTGCGCGCCACGGGCGACGCGGCGGTTGCGCCGCGGTGCACGCGGGCGCACGACGTGCCCGCCGTGGCGTTCTCCATCGGCGGGTACACGGGCAACATCTTCCACGACTTCTCCGACGTGATCGTGCCGCTGTACAACACCGTGCAGCGCTACCGCGGCGGGGTGCAGCTGGTGATGGCGAACGTGGCGTCGTGGTGGCTCGTCAAGTACGACAAGCTCCTCCGCGAGCTGTCGCGCCACGCGCCGATCGACCTCGCCAAGGCCGGCGCCGCCGGCGACGTGCACTGCTTCCCGAGCGCCGTCGTCAGCCTCCGCGCGCACCGGGAGCTCATCATCGAGCGGGAGCGCAGCCTGGACGGGCTGGCGACGCCGGACTTCACGCGGTTCCTCCGCCGCGCGCTGTCGCTGCCGCGCGACGCGCCGACGCGGCTCGGCGACGGCACCGGGCGGCGGCCGCGCCTCCTGGTCATCTCCCGGGGGCGCACCAGGCTGCTCCTGAACCTCGACGCCGTGGTCCGCGCGGCGGAGGAGGTCGGGTTCGAGGTGGTGGTGAACGAGTCGGACGTGGGGAACTCCATCGAGCAGGTGGGGAAGCTGATCAACTCGTGCGACGCGCTGCTCGGCGTCCATGGCGCCGGCCTGACGAACATGATGTTCCTGCCGCCGGGAGCGACGATGGTGCAGGTGGTGCCATGGGGCGGCCTCCAGTGGATCGCGCGCATGGACTACGGCGAGCCGGCGGCGGCGATGGGGCTCAACTACATCCAGTACGAGATCGCCGTCGCCGAGAGCTCGCTCAAGGACAAGTACCCCGCCGGCGACGAGATCTTCACCAACCCGACGGGTCTGCACAAGAGAGGGTTCGCCTTCATGAAGCAGACGCTCATGGACGGCCAGGACATCACCATTGACGTCACCCGATTCAGGCCAGTGTTGCAGCAAGCTCTCGACAACCTTGCCACCAAGTAG</cdnaseq>

Protein Sequence

<aaseq>MKPGGSSGRLHALRFESQRFRLLTIVVGCFLISLTFLLSSRPDATVFSTLSPRESLEDARMPAMKMLHRSSSGGLTRDFHVDILPQQGERHAHMQQSVDQTAEKTEWVKDTVIIQEVAGERSEEAEEAAERVAADSGDEAAPAVEEKNQQQLPVKLQDAGEPARTPEQTVTSHSVDRRPLCDFSDFRTDICDFSGDVRMAANTSEFVVVVDPAAAAVSHKVRPYPRKGDATCMGRVTEITVRATGDAAVAPRCTRAHDVPAVAFSIGGYTGNIFHDFSDVIVPLYNTVQRYRGGVQLVMANVASWWLVKYDKLLRELSRHAPIDLAKAGAAGDVHCFPSAVVSLRAHRELIIERERSLDGLATPDFTRFLRRALSLPRDAPTRLGDGTGRRPRLLVISRGRTRLLLNLDAVVRAAEEVGFEVVVNESDVGNSIEQVGKLINSCDALLGVHGAGLTNMMFLPPGATMVQVVPWGGLQWIARMDYGEPAAAMGLNYIQYEIAVAESSLKDKYPAGDEIFTNPTGLHKRGFAFMKQTLMDGQDITIDVTRFRPVLQQALDNLATK</aaseq>

Gene Sequence

<dnaseqindica>1..148#298..468#555..665#942..1028#1157..2328#ATGAAGCCGGGGGGGAGCAGCGGGCGGCTGCACGCCCTGCGGTTCGAGTCGCAGAGGTTCAGGCTGCTGACCATCGTCGTCGGCTGCTTCCTCATCTCCCTCACCTTCCTCCTCTCCTCCCGCCCCGACGCCACCGTCTTCTCCACCCGTATGTTCTTCTTCATCTCTTCTTCTTCTTCTTCTTCTTCTTCCTCCTCTCACTTTCTTTCTTATCATCGATCTCGATCTCCGTTGCATCATGCATATGCACTCGGTGCAAATTAAGCAGCAAAAGTCTGAACTGCATTGCATATGCAGTGAGCCCCAGGGAGTCGTTGGAAGACGCACGCATGCCGGCGATGAAGATGCTGCACCGATCATCGTCCGGCGGCCTCACCCGGGATTTCCATGTCGACATCCTGCCGCAGCAGGGAGAGAGACATGCTCATATGCAGCAGAGCGTCGATCAAACCGCTGAAAAGACAGAATGTATATATGTAACCCATAATCATTCATTATTCTGTCCATAGATTTAGTTCGTTTTTCTTATGAACTTATACTGAATTAATTGGTAGGGGTGAAAGACACGGTGATAATCCAGGAGGTCGCCGGCGAGAGATCGGAAGAGGCGGAGGAGGCGGCGGAGCGTGTCGCGGCAGATTCCGGCGACGAGGCTGCACCTGCAGGTATACGACGCAACTGCAACTTTCGCAAAGGACTGGTTTTTGACTCGCCTGTAGCTTTCATGGAGAAAATCTGACCTCTAAATTGAACCCACCTGCCAGTCGCCGACGAGGACAACGCCGTGAAGACCACGGCCGCCGTGGAAGAAACCACTGCTCGTCCCGACCAGCCATGTACCCATCACACACCTGCACGCAGTCAAATTATTGCAGAATTCCAAATTCCGTTGAAATTTAATTTTCTCAAGAGAAAAAATCGTGTTTCTTCTTCTTTTACAGTGGAGGAGAAGAATCAGCAGCAGCTTCCGGTGAAGCTGCAGGACGCCGGCGAGCCAGCTCGCACGCCGGAGCAAACGGTGACGTCACGTACGTGATTAATTTCAAACCGAGGAATTAATTAAAATCAACGCCATGTCTAATACTGCAAGTGCAGTTTAATTTTGAATTTTGGGCACCAACTAACGTGGCGGACAACGTGCGCGCCATGAACGCAGATTCCGTGGACCGGCGGCCGCTCTGCGACTTCTCCGACTTCCGCACCGACATCTGCGACTTCTCCGGCGACGTCCGCATGGCGGCCAACACGTCGGAGTTCGTCGTCGTCGTCGACCCGGCGGCGGCGGCGGTGTCGCACAAGGTGCGGCCGTACCCGCGGAAGGGCGACGCGACGTGCATGGGGCGCGTCACGGAGATCACCGTGCGCGCCACGGGCGACGCGGCGGTTGCGCCGCGGTGCACGCGGGCGCACGACGTGCCCGCCGTGGCGTTCTCCATCGGCGGGTACACGGGCAACATCTTCCACGACTTCTCCGACGTGATCGTGCCGCTGTACAACACCGTGCAGCGCTACCGCGGCGGGGTGCAGCTGGTGATGGCGAACGTGGCGTCGTGGTGGCTCGTCAAGTACGACAAGCTCCTCCGCGAGCTGTCGCGCCACGCGCCGATCGACCTCGCCAAGGCCGGCGCCGCCGGCGACGTGCACTGCTTCCCGAGCGCCGTCGTCAGCCTCCGCGCGCACCGGGAGCTCATCATCGAGCGGGAGCGCAGCCTGGACGGGCTGGCGACGCCGGACTTCACGCGGTTCCTCCGCCGCGCGCTGTCGCTGCCGCGCGACGCGCCGACGCGGCTCGGCGACGGCACCGGGCGGCGGCCGCGCCTCCTGGTCATCTCCCGGGGGCGCACCAGGCTGCTCCTGAACCTCGACGCCGTGGTCCGCGCGGCGGAGGAGGTCGGGTTCGAGGTGGTGGTGAACGAGTCGGACGTGGGGAACTCCATCGAGCAGGTGGGGAAGCTGATCAACTCGTGCGACGCGCTGCTCGGCGTCCATGGCGCCGGCCTGACGAACATGATGTTCCTGCCGCCGGGAGCGACGATGGTGCAGGTGGTGCCATGGGGCGGCCTCCAGTGGATCGCGCGCATGGACTACGGCGAGCCGGCGGCGGCGATGGGGCTCAACTACATCCAGTACGAGATCGCCGTCGCCGAGAGCTCGCTCAAGGACAAGTACCCCGCCGGCGACGAGATCTTCACCAACCCGACGGGTCTGCACAAGAGAGGGTTCGCCTTCATGAAGCAGACGCTCATGGACGGCCAGGACATCACCATTGACGTCACCCGATTCAGGCCAGTGTTGCAGCAAGCTCTCGACAACCTTGCCACCAAGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002507