BGIOSGA002524

From RiceWiki
Revision as of 10:37, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA002524| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA002524, complete gene.| tag = OsI_001...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA002524

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002524, complete gene.

LocusTag

OsI_00123

Ensembl Transcript ID

BGIOSGA002524-TA

Ensembl Protein ID

BGIOSGA002524-PA

Length

2289

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:918343..920631

Sequence Coding Region

919916..920631,919385..919439),complement(918343..918612

Genome Context

<gbrowseImage1> name=IndicaChromosome01:918343..920631 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:918343..920631 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCAAGCCTTTGTTTTCATCTTTGCTGTTCTTGCTCTTCTTGCAGGAGATGTCGAGGGGCGGCAAGGGTGCTATCCTTTCTCCTGTGGACATCTCCAGAACATTTCTCATCCTTTCCGCCGGCGAGGTGATCCACAAAGATGCGGTGTTCCGTCATATGAGTTAGACTGCAGAGATAGCAAGGCTACCATTAGGATCAACACAGGGACATACTATGTAACCAGCATCAACTACACTACTTCTGTCTTCTGGGTTGTGGATGCCAGCCTGAAAGATACAAACAGCAGCTGCCCTCTTCCTCGCTCGGATCAGCTTCCTTACGTTTGGAGGGGTATCCAGGGATCACATGGCGGCTGGGACCTGACCCTTGACCCTGTAGCTACATGTGTTAGCTTTGTGAATTGTTCACAGGCAGTAAGGAGTAATAGTGTGTACGTTCCTGTTGATTGCCTGAGTACAAGCTCTTCGTTTGTTTATATGTTTGTTTCCTGGATGATGCCTCCATTTGAGGGTTTTCCAATCATCGAAAACCTTGAGACTTCATGTCGCTACCTTGCCATGATTCCCTTGGGTGGTAGGGACTCGCCATTGCCACATAATGCAAGCTTTTCAGACATCGTCAGATCCATGAGGAATGGATTTGCTGTTCAATTTCCCCTCATACATAGGTGGAGTAGGGTTGGGCACATCAAGGATTGTCTGATGGGGTCGATTCGTTTTATGCAGGTTCGTGATAGCTCCGTTGACACTATTGACCTTCCTTGCCTTCAACTGGTTCAACAAAAGATGGGTGAGATTGCCAATGCCTTCAATATGCATGAGCTGGAAAAGAAGTTGTGTGTTGTTGGTCTACATTGCATTCAAATGAAGCCTCCTGATCGTCCAACGATGAGTGAGGTCATAGAAATGCTTGAAGGTGATGTTGATGGTCTGCAGCTGCCTTCAAGGCCATTCTTCTGCGATGATGAACCCCTGCCATTGCTAGTGGATTCTTGCCGTTTCTCCTCTGAACTAACTGAAATCTCAGAGGAGGATGAGTGA</cdnaseq>

Protein Sequence

<aaseq>MQAFVFIFAVLALLAGDVEGRQGCYPFSCGHLQNISHPFRRRGDPQRCGVPSYELDCRDSKATIRINTGTYYVTSINYTTSVFWVVDASLKDTNSSCPLPRSDQLPYVWRGIQGSHGGWDLTLDPVATCVSFVNCSQAVRSNSVYVPVDCLSTSSSFVYMFVSWMMPPFEGFPIIENLETSCRYLAMIPLGGRDSPLPHNASFSDIVRSMRNGFAVQFPLIHRWSRVGHIKDCLMGSIRFMQVRDSSVDTIDLPCLQLVQQKMGEIANAFNMHELEKKLCVVGLHCIQMKPPDRPTMSEVIEMLEGDVDGLQLPSRPFFCDDEPLPLLVDSCRFSSELTEISEEDE</aaseq>

Gene Sequence

<dnaseqindica>1..716#1193..1247#2020..2289#ATGCAAGCCTTTGTTTTCATCTTTGCTGTTCTTGCTCTTCTTGCAGGAGATGTCGAGGGGCGGCAAGGGTGCTATCCTTTCTCCTGTGGACATCTCCAGAACATTTCTCATCCTTTCCGCCGGCGAGGTGATCCACAAAGATGCGGTGTTCCGTCATATGAGTTAGACTGCAGAGATAGCAAGGCTACCATTAGGATCAACACAGGGACATACTATGTAACCAGCATCAACTACACTACTTCTGTCTTCTGGGTTGTGGATGCCAGCCTGAAAGATACAAACAGCAGCTGCCCTCTTCCTCGCTCGGATCAGCTTCCTTACGTTTGGAGGGGTATCCAGGGATCACATGGCGGCTGGGACCTGACCCTTGACCCTGTAGCTACATGTGTTAGCTTTGTGAATTGTTCACAGGCAGTAAGGAGTAATAGTGTGTACGTTCCTGTTGATTGCCTGAGTACAAGCTCTTCGTTTGTTTATATGTTTGTTTCCTGGATGATGCCTCCATTTGAGGGTTTTCCAATCATCGAAAACCTTGAGACTTCATGTCGCTACCTTGCCATGATTCCCTTGGGTGGTAGGGACTCGCCATTGCCACATAATGCAAGCTTTTCAGACATCGTCAGATCCATGAGGAATGGATTTGCTGTTCAATTTCCCCTCATACATAGGTGGAGTAGGGTTGGGCACATCAAGGATTGTCTGATGGGGTCGATTCGGTGAGTTTCTGGTGTTGTTCCATTACATTCATACATACACTTTTTCGAGAATGCATTCATACATAAACTTGAGTACATATTTGTCTTAAAAGCATTGATACGCTATCTTCTCTACCATGTCACGGCCTTGCAGGGGCTTTCATGAAGAACCATTGTCCAATCAAACCATCAAGGATCAGATCGTGGACATGCTTTTTATTGACTTTAGTTTCTGGTCCTGCATAATTAGAGGAGTGGGCATGAAAGATTATTTCGATATGCCACAATACATGATGGGGATGCTTCGTGGAAAAATAGAATTTTATGGCGGATTCATTGTACAATTTGCTTTGTTTGTTTTCAAGTGGGTTGCTGGTACTTCTACGATTCTGTCTTCTTAATTATACAGTACATAATCACCACTGCACCGTTCCAATGTCTAAAGACACATTTACTAAAGGTTATCACTGTTTATGTAAACTTGTTTTTTTATGCAGTTTTATGCAGGTTCGTGATAGCTCCGTTGACACTATTGACCTTCCTTGCCTTCAAGTATTGGAAAACTAGAATAAAAATCGACGCAGTTGAGAAGTTTTTACGAATGCAGCTAATGCTTGGTCCAACAAGGTACGCCTATACAGACATCATTGCAATGACAAGCCATTTTAGAGACAAGTTGGGCCAGGGTGGCTATGGATCCGTGTTCAAGGGAGTGATACTGCCTGGTGATGTCCATGTTGCCATCAAAATGCTGGCCAACTACAATTGTAATGGAGAAGAATTCATCAGCGAGGTATCCACCATTGGCAGTATCCATCATGTCAATGTAGTACGTCTAGTGGGGTATTGTGCAGAGGAAATGAGGAGAGCACTTGTGTATGAGTACATGCCCCATGGATCTCTTGACAGGTTCATCTTCTCTCCTGACAAGAGTCTCTCTTGGGACAAGCTCAATGAGATCGCATTGGGCATTGCTAGAGGAATAAACTACTTACATCAGGGGTGTGATATGCAGATTCTACATTTTGATATCAAGCCGCACAACATCCTTCTTGATAGCAATTTCGTCCCAAAAGTTGCCGATTTTGGCCTCGCCAAACTGTACCCACAGGATAACAGTTTTGTGCCAGTTAGCGCTGCACGAGGAACAGTAGGTTATATTGCTCCTGAGATGATATCTCGGAGCTTTGGTGCCATATCTAGCAAATCTGATGTTTATAGCTTTGGAATGCTTCTGTTGGAGATGGCTGGAGGGCGAAGGAACTCTAAGCAGGATATGTCGAGCTCAAGCCAGTCATATTATCCATCTTGGGTGTATAATCAGCTGGTTCAACAAAAGATGGGTGAGATTGCCAATGCCTTCAATATGCATGAGCTGGAAAAGAAGTTGTGTGTTGTTGGTCTACATTGCATTCAAATGAAGCCTCCTGATCGTCCAACGATGAGTGAGGTCATAGAAATGCTTGAAGGTGATGTTGATGGTCTGCAGCTGCCTTCAAGGCCATTCTTCTGCGATGATGAACCCCTGCCATTGCTAGTGGATTCTTGCCGTTTCTCCTCTGAACTAACTGAAATCTCAGAGGAGGATGAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002524