BGIOSGA002546

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Revision as of 10:38, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA002546| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA002546, complete gene.| tag = P0005A0...")
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Gene Name

BGIOSGA002546

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002546, complete gene.

LocusTag

P0005A05.28

Ensembl Transcript ID

BGIOSGA002546-TA

Ensembl Protein ID

BGIOSGA002546-PA

Length

3632

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:479216..482847

Sequence Coding Region

482467..482847,480061..480516),complement(479216..479509

Genome Context

<gbrowseImage1> name=IndicaChromosome01:479216..482847 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:479216..482847 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAAATGCTTCAAGCAGCAGCAGCAGCAGGGCGGCGGCAATGGCGGTGGGCAGGGGAAGAGGCTGGAGAGGCGGCTGTCGCTGGGGGAGTACAAGAAGGCGGTGTCGTGGTCCAAGTACCTGGTGGCTCCGCCGGGAGCCAAGATCCGGGGTGGCGGCGAGGAGCTGTGGAGCGCCGACCTGTCCAAGCTGGAGATCCGGACCAAGTTCGCCACCGGCAGGCACAGCCGCGTCTACTCCGGCCGCTACGCCGCCCGCGACGTTGCCATCAAGATGGTTAGCCAGCCTGAGGAAGACGCCGCCCTCGCCGCCGAGCTCGAGCGCCAGTTCGCCTCCGAGGTCGCCCTCCTCCTCCGCCTCCGCCACCCCAACATCATCTCGTTTGTTGCAGCATGCAAGAAACCACCAGTCTTCTGTATCATTACTGAGTACATGGCAGGTGGCTCCCTTAGGAAATATCTACATCAGCAAGAACCTCATTCTGTTCCAATTGAATTAGTGTTGAAGTTATCCTTAGAGATTGCTCGTGGAATGAGCTACTTACACTCGCAAGGCATACTTCACAGAGACTTGAAGTCAGAGAATATACTTCTCGATGGAGATATGTCAGTAAAGGTGGCAGATTTTGGAATTTCGTGCTTAGAATCGCAGTGCGGAAGTGGTAAGGGTTTTACTGGAACGTATAGGTGGATGGCTCCAGAAATGATCAAAGAGAAACACCATACGAGGAAGGTTGATGTATACAGCTTTGGAATTGTCTTGTGGGAGATTTTGACTGCTTTGGTACCATTCAGTGAGATGACACCCGAGCAAGCTGCTGTTGCTGTTGCCTTGAAGAATGCTAGGCCACCACTGCCTCCTTCATGCCCTGTGGCAATAAGCCATCTGATAACTCAGTGCTGGGCGACCAACCCAGACAGAAGGCCTCAGTTCGACGACATCGTCGCCATACTTGAGAGCTACATAGAAGCTCTTGAAGAGGATCCATCCTTCTTGCAGTCATATATACCGCCTCCGCATCCGCTGCACCATCACCATCACCAGCATCATAATCATCATCATCAACAGAGCCTTCTCCGGTGCTTCCCTCGCTACAGAACCACCCGACGATCTGCATCTCTGAGAGTATAA</cdnaseq>

Protein Sequence

<aaseq>MKCFKQQQQQGGGNGGGQGKRLERRLSLGEYKKAVSWSKYLVAPPGAKIRGGGEELWSADLSKLEIRTKFATGRHSRVYSGRYAARDVAIKMVSQPEEDAALAAELERQFASEVALLLRLRHPNIISFVAACKKPPVFCIITEYMAGGSLRKYLHQQEPHSVPIELVLKLSLEIARGMSYLHSQGILHRDLKSENILLDGDMSVKVADFGISCLESQCGSGKGFTGTYRWMAPEMIKEKHHTRKVDVYSFGIVLWEILTALVPFSEMTPEQAAVAVALKNARPPLPPSCPVAISHLITQCWATNPDRRPQFDDIVAILESYIEALEEDPSFLQSYIPPPHPLHHHHHQHHNHHHQQSLLRCFPRYRTTRRSASLRV</aaseq>

Gene Sequence

<dnaseqindica>1..381#2332..2787#3339..3632#ATGAAATGCTTCAAGCAGCAGCAGCAGCAGGGCGGCGGCAATGGCGGTGGGCAGGGGAAGAGGCTGGAGAGGCGGCTGTCGCTGGGGGAGTACAAGAAGGCGGTGTCGTGGTCCAAGTACCTGGTGGCTCCGCCGGGAGCCAAGATCCGGGGTGGCGGCGAGGAGCTGTGGAGCGCCGACCTGTCCAAGCTGGAGATCCGGACCAAGTTCGCCACCGGCAGGCACAGCCGCGTCTACTCCGGCCGCTACGCCGCCCGCGACGTTGCCATCAAGATGGTTAGCCAGCCTGAGGAAGACGCCGCCCTCGCCGCCGAGCTCGAGCGCCAGTTCGCCTCCGAGGTCGCCCTCCTCCTCCGCCTCCGCCACCCCAACATCATCTCGGTACCTTTCTTCCTTCTTGTTCGATTCAATTTCAATTTCTATTTCTTCTTCTTTTCTAGTACTTTATTAATAACTTGTTACTATTATTATTTCAATTATAATGGATTCTGTCCTGTGCATCTTGTGGGGACTTCTCCATCATTTTTGTGCACTTCCATCCATCAAGTCCAATTTAATTTCTAGTGCGCTCGTAGATGTTTACTACTAACACAAGTTGTTGCGTTTTGGTTTGGTTGGTTTTGTCTGTACCAGATATTGAATACTAGATTATCTCACTTGAACAGCCTGTTAGTTTCACATCTTAGTTCCTTTACGCTTTATTGGTGTGCCCCATGCGTGCACTAGGCTGTAGGATTTGTTATGCTAACCGATCTTCACATTAAAGGTTCTTACTTTATGCCTTGTTTTGATTGGGCGGAAGGATGGGGTCGAGAAGATAAGTCTGGGTGCGACATGATTCATGCTTGTTTATACTAACCCAATGAGGAGGGAGTGAACATGGCAGAAAAAAAAAACTTCTCTTCCAGTAGTATGATATTGATAGTTAAGATAGCGAAATCTGAGTCACGTACAAATGTTACAGCAATACTGTTCTCCTCCCTACTCTTTCTCTACGTTCATATCTCACCCTTTCGATCCATCGAGCAGAGAGCTGGTAATGATTGTTAGTGATTTTTTGTGAGATCCTGAATGTTTTTTTGTGCACTTTCCATCATATATATTACTTAATAGAGCTTCCTTTCTTTGGAGAAAACTCAACAGAGCTTCGTATTTAATGGAGAAGCACATCTAATAAACTTCTCTAAGCCGCCTAACTATTTTTAGCCATCCACTGGAGGTGGTTTATAGGAAAGTTTAACCCCTCTGTTTCTTTGATTGGCGGTATATCAGGATATTTTTACACGAGTGCTGCAAAAGCTAGCCAGTCTTTAGGTTAATTGATTAGTCCAATCACTGTCCGCACCACTTTTATAACTTATGTGAATTGGCTTCATTATGAAGAAGTTGGGTAAAGAGAGCCACCAGCCAATGGTTGTATTCAGGTTTTTATCCTATGCTTGATGAGTTCATACCATATACAGCATTATAGGTGATAATGTTAGATACTTGTATGAGAAGTTAAAAGATGCTATTTTCCTAATTAAAGTGCGTGGTGGACCATATATGACATCCAAACTTAACTGCTTTCATATGCCAAGAAAAGTGTCTCTCGTAAGAATTTAATACGGAGAATTGACTCAGAGAGTGATAGTTCGTGACTTTGCCTACAGATAAAAATCTATGTTACTTTTCACTTTATCAAGTGCCTACCTGGATTACTGGTCCCACAGATCACATGGAAAGTATCACTTTGTCAAACCAACCGAAGTTGAGTAAGCACAAAAATCATGTGACATCTATGCAAGTTGCACTCCAAATGTTCTTCAGTAATACTGGCAAATTTCTGCAAGAACCTTAATTATTTGTGAAATTGGTTTATATGAGTGTTAGGCCGCATTTGATCTCAAATCGTTTTCCTCTGTTGCATTATTTGCCGTTATAATATTTTAGCTGTCCATGTTAAATATATTGCTAAAATAGGTCTTGGTTCTGATAGTTTGATAGATAAACTGTTCATCCCTTCGTCACCCCTTTTCTAACCTGTTATCCTCTATTTGCCCCTTCGAAATTTGCACAGTGCGCAGAGTGATGGGAGGGGCAAATAGAGGGTAAAAGTTAAGAACAAGGGTCATTGAATGGATGAGCAGTTTCAGAGAGGTAATTAAGGGAAGTGGCCAACTTACAGAGGCAAATAAAGAATTTCTCTACATATAAAGCATGCTGGATTTGAAATGAAAGATGCCCACTACTTTTAACTTGTGAAGGAACTCTTGTAACCAATTAATCTCGTTTGCTCATTTTGTTGAGTCTCAAACTGATAAGAAATATATCTAAACTCTTGTTTTTCAGTTTGTTGCAGCATGCAAGAAACCACCAGTCTTCTGTATCATTACTGAGTACATGGCAGGTGGCTCCCTTAGGAAATATCTACATCAGCAAGAACCTCATTCTGTTCCAATTGAATTAGTGTTGAAGTTATCCTTAGAGATTGCTCGTGGAATGAGCTACTTACACTCGCAAGGCATACTTCACAGAGACTTGAAGTCAGAGAATATACTTCTCGATGGAGATATGTCAGTAAAGGTGGCAGATTTTGGAATTTCGTGCTTAGAATCGCAGTGCGGAAGTGGTAAGGGTTTTACTGGAACGTATAGGTGGATGGCTCCAGAAATGATCAAAGAGAAACACCATACGAGGAAGGTTGATGTATACAGCTTTGGAATTGTCTTGTGGGAGATTTTGACTGCTTTGGTACCATTCAGTGAGATGACACCCGAGCAAGCTGCTGTTGCTGTTGCCTTGAAGGTATGAATTTTTGACATGCCACCTCTCCAATCTTCATGTCCATCTTTGTTTCCTTGGCTATAATGTAGGCTGTTAAAATCATGAGATGCTGCTGCCTTTTCAGTCGCAGTACCAGTAGAAAATTTTGGTTTCTTTCTGTAAGAGAGTAAAAAATGTTTTTTTTCCCTTATGGAAACTATGGCGGACATTTAATTAGCCTGAACTTTATTGGTATCAAAATTGCGGGTAATTAGAGGATTTAATTAAGCCTGAACTTTTTTTTTGCTTAAATCGTCTGTATCACCCCAAAAATTGTTTGTAATTCTGTTGACATGGTTTCTAGCTTGAAAAAAAAAACATATTAAACATGCTCGATCCATTTAGGTAATTACTGCTCAACTAGCGATGAAATTTGAATAGGCTGAAAATATGGTGTTTTTCCACACATTGTGTTGCGCAGCAAATATCTATATGATCCCATAAGTTTGGAAAATAAGAGTCGGTTAGCTTGTCCTATCTGTTACTGATGACCTTCATCTATTGGACTTTTGCAACTAATAGCTTTTGTGCAGAATGCTAGGCCACCACTGCCTCCTTCATGCCCTGTGGCAATAAGCCATCTGATAACTCAGTGCTGGGCGACCAACCCAGACAGAAGGCCTCAGTTCGACGACATCGTCGCCATACTTGAGAGCTACATAGAAGCTCTTGAAGAGGATCCATCCTTCTTGCAGTCATATATACCGCCTCCGCATCCGCTGCACCATCACCATCACCAGCATCATAATCATCATCATCAACAGAGCCTTCTCCGGTGCTTCCCTCGCTACAGAACCACCCGACGATCTGCATCTCTGAGAGTATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002546